Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 2,632,393 C→T 7.7% intergenic (‑184/+498) fnbB ← / ← fnbA fibronectin‑binding protein B/fibronectin‑binding protein A

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007302,632,3930CT 7.7% 218.2 / 7.0 78intergenic (‑184/+498)fnbB/fnbAfibronectin‑binding protein B/fibronectin‑binding protein A
Reads supporting (aligned to +/- strand):  ref base C (21/50);  new base T (3/3);  total (25/53)
Fisher's exact test for biased strand distribution p-value = 3.69e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.77e-01

CAATAAATGCAATTCTATATTGTTCGGTTTTTAAAAGCAATGAAAAAAAGCGAGTTAATAAAAAGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACTAAACCATACATAATAATCGCCTGTACAATGCATCATTAACAAGTCACTGA  >  CP000730/2632255‑2632531
                                                                                                                                            |                                                                                                                                          
cAATAAATGCAATTCTATATTGTTCGGTTTTTAAAAGCAATGAAAAAAAGCGAGTTAATAAAAAGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAATGcgc                                                                                                                                          >  2:322860/1‑139 (MQ=255)
cAATAAATGCAATTCTATATTGTTCGGTTTTTAAAAGCAATGAAAAAAAGCGAGTTAATAAAAAGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGctc                                                                                                                                          <  1:52194/141‑1 (MQ=255)
  aTAAATGCAATTCTATATTGTTCGGTTTTTAAAAGCAATGAAAAAAAGCGAGTTAATAAAAAGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCtt                                                                                                                                        <  2:325270/141‑1 (MQ=255)
  aTAAATGCAATTCTATATTGTTCGGTTTTTAAAAGCAATGAAAAAAAGCGAGTTAATAAAAAGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCtt                                                                                                                                        <  2:188830/141‑1 (MQ=255)
   tAAATGCAATTCTATATTGTTCGGTTTTTAAAAGCAATGAAAAAAAGCGAGTTAATAAAAAGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTg                                                                                                                                       >  1:259171/1‑141 (MQ=255)
   tAAATGCAATTCTATAGTGTTCGGTTTTTAAAAGCAATGAAAAAAAGCGAGTTAATAAAAAGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTg                                                                                                                                       <  1:562869/141‑1 (MQ=255)
    aaaTGCAATTTTATATTGTTCGGTTTTTAAAAGCAATGAAAAAAAGCGCGTTAATAAAAAGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGa                                                                                                                                      <  2:556367/141‑1 (MQ=255)
       tGCAATTCTATATTGTTCGGTTTTTAAAAGCAATGAAAAAAAGCGAGTTAATAAAAAGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTTCATACAAAGCTCTTGAaca                                                                                                                                   >  2:268163/1‑141 (MQ=255)
          aaTTCTATATTGTTCGGTTTTTAAAAGCAATGAAAAAAAGCGAGTTAATAAAAAGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCt                                                                                                                                >  2:215989/1‑141 (MQ=255)
            ttCTATATTGTTCGGTTTTTAAAAGCAATGAAAAAAAGCGAGTTAATAAAAAGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCGTACAAAGCTCTTGAACACCttt                                                                                                                              >  2:421868/1‑140 (MQ=255)
            ttCTATATTGTTCGGTTTTTAAAAGCAATGAAAAAAAGCGAGTTAATAAAAAGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTg                                                                                                                              >  2:272023/1‑141 (MQ=255)
                          gTTTTTAAAAGCAATGAAAAAAAGCGAGTTAATAAAAAGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTg                                                                                                                <  1:220624/141‑1 (MQ=255)
                          gTTTTTAAAAGCAATGAAAAAAAGCAAGTTAATAAAAAGTTAAGATTGTTGTTAACTTTAGGTATAATGAGTTTTTTATTTTTTGAAACTCAC‑‑ATACATATTGCATACAAAGCTCTTGAACACCTTGATATAAAAgcgctg                                                                                                                >  2:238951/1‑136 (MQ=255)
                              ttAAAAGCAATGAAAAAAAGCGAGTTAATAAAAAGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTACATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTAtt                                                                                                            >  2:461482/1‑141 (MQ=255)
                                aaaaGCAATGAAAAAAAGCGAGTTAATAAAAAGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTAtttt                                                                                                          <  2:347516/141‑1 (MQ=255)
                                         gAAAAAAAGCGAGTTAATAAAAAGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCTTACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTAtactta                                                                                                 >  2:584656/1‑141 (MQ=255)
                                         gAAAAAAAGCGAGTTAATAAAAAGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGTGATAACAGACTTATATTTTTTAtactta                                                                                                 <  2:180456/141‑1 (MQ=255)
                                          aaaaaaaNCTAGTTAATAAAAAGTAAAGATTGTTGTTAACTTTATGTATAATGGCTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTAtacttac                                                                                                <  2:73299/141‑1 (MQ=255)
                                          aaaaaaaGCGAGTTAATAAAAAGTTAAGATTGTTGTTAACGTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTAtacttac                                                                                                <  2:634088/141‑1 (MQ=255)
                                             aacaGCGATGTAATAAAAATTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATGGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTTTATTTTTTATACTTACttt                                                                                             <  1:417711/138‑1 (MQ=255)
                                             aaaaGTGAGTTAATAAAAAGTTAAGATTGTTGTTAACTTTATGTATAAGGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACttt                                                                                             <  1:377555/141‑1 (MQ=255)
                                             aaaaGCGAGTTAATAAAAAGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACttt                                                                                             <  1:344148/141‑1 (MQ=255)
                                                  cGAGTTAATAAAAAGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGTTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTttaaa                                                                                        >  2:465067/1‑141 (MQ=255)
                                                  cGAGTTAATAAAAAGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGTTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTttaaa                                                                                        >  2:230763/1‑141 (MQ=255)
                                                  cGAGTTAATAAAAAGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGTTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTttaaa                                                                                        >  2:666775/1‑141 (MQ=255)
                                                   gattaaagaaaaaTTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTttaaat                                                                                       <  2:551882/133‑1 (MQ=255)
                                                   gAGTTAATAAAGAGTTAAGATTGTTGTTAACTTTATGCATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTTAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTttaaat                                                                                       <  1:654417/141‑1 (MQ=255)
                                                     gTTAATAAAAAGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTttcaatta                                                                                     >  2:342629/1‑141 (MQ=255)
                                                         ataaAAAGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTaaattaaatt                                                                                 >  2:245057/1‑141 (MQ=255)
                                                           aaaaaGTTAAGCTTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑GTATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTaaattca                                                                               <  1:358901/141‑1 (MQ=255)
                                                           aaaaaGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTaaattca                                                                               <  1:101636/141‑1 (MQ=255)
                                                           aaaaaGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTaaattca                                                                               <  1:142895/141‑1 (MQ=255)
                                                           aaaaaGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTaaattca                                                                               <  2:259171/141‑1 (MQ=255)
                                                           aaaaaGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTaaattca                                                                               <  1:646067/141‑1 (MQ=255)
                                                             aaaGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTaaattcaaa                                                                             <  1:559586/141‑1 (MQ=255)
                                                                gTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCACGTTAAAGTGGTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTaaattcaaattc                                                                          >  1:680488/1‑141 (MQ=255)
                                                                  tAAGATTGTTGTTAACTTTATGTATAATGAGTATTTTATTATTTGAAACTCAC‑‑ATACATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTATTTATACTAACTTTTTAAATTAAATTCAAATTCAt                                                                        >  2:102371/1‑141 (MQ=255)
                                                                    aGATTGTTTTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCt                                                                      <  1:31928/141‑1 (MQ=255)
                                                                    aGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTTATCt                                                                      <  1:472897/141‑1 (MQ=255)
                                                                    aGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCt                                                                      <  1:21425/141‑1 (MQ=255)
                                                                    aGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCt                                                                      <  1:70983/141‑1 (MQ=255)
                                                                    aGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCt                                                                      <  1:408704/141‑1 (MQ=255)
                                                                    aGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCt                                                                      <  2:656610/141‑1 (MQ=255)
                                                                    aGATTGTTGTTAACTTTATGTATAATGAGCTTTTGATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCt                                                                      <  1:569565/141‑1 (MQ=255)
                                                                     gATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATTACAGTCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTa                                                                     <  2:629802/141‑1 (MQ=255)
                                                                       ttgttgTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATCCAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAAt                                                                   <  1:505502/141‑1 (MQ=255)
                                                                          ttgttAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTa                                                                <  2:633440/141‑1 (MQ=255)
                                                                           tgttAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTaa                                                               <  1:624854/141‑1 (MQ=255)
                                                                                    tATGTATAATGAGTTTTTTATTATTTGAAACTCACATATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAata                                                        <  2:43882/141‑1 (MQ=255)
                                                                                     aTGTATAATGAGTTTTTTATTATTTGGAACTCAC‑‑ATATAAATTCCATAACAAGATCATGAACGCATTGAAATAACAGGCTTGTGTTTTTTATTATTACTTTTTGAATTAAATTCACATTCATTTAATTTAAAACATtatat                                                     >  2:149287/1‑140 (MQ=255)
                                                                                     aTGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCCCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTCAATTCAAATTCATCTAATTTAAAACAATATAc                                                     >  1:463738/1‑141 (MQ=255)
                                                                                      tGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACt                                                    <  1:129795/141‑1 (MQ=255)
                                                                                      tGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACt                                                    <  1:530293/141‑1 (MQ=255)
                                                                                      tGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACt                                                    <  1:601860/141‑1 (MQ=255)
                                                                                        tataATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTTTACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAATAATATACTaa                                                  >  2:239077/1‑141 (MQ=255)
                                                                                        taaagggAGTTTTTTGGTAGCCGAAACTCGC‑‑ATATATTTTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAACCAATATACtca                                                  >  2:407148/7‑139 (MQ=37)
                                                                                          taATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTAGTTTTTAAATTAAATATAAATTCATATACTTTAATACAATATACTaaaa                                                >  2:462818/1‑140 (MQ=39)
                                                                                          taATGAGTTTTTGATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACTAAAc                                                >  1:361600/1‑141 (MQ=255)
                                                                                            atcatcttttttttATTTGAAACTCAC‑‑ATATATATTGCATACAACGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACTAAACca                                              <  1:292491/135‑1 (MQ=255)
                                                                                            acgAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACTAAACca                                              <  1:29522/139‑1 (MQ=255)
                                                                                            aTGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACTAAACca                                              <  1:311709/141‑1 (MQ=255)
                                                                                                 ttttttATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACTAAACcatacat                                         >  1:537229/1‑141 (MQ=255)
                                                                                                   ttttATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACTAAACCATACataa                                       <  1:664417/141‑1 (MQ=255)
                                                                                                        ttattTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACTAAACCATACATAATAATc                                  <  1:245057/141‑1 (MQ=255)
                                                                                                              gAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACTAAACCATACATAATAATCGCCTGt                            <  1:465934/141‑1 (MQ=255)
                                                                                                              gAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACTAAACCATACATAATAATCGCCTGt                            <  1:56355/141‑1 (MQ=255)
                                                                                                                 aCTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACTAAACCATACATAATAATCGCCTGTACa                         <  1:326875/141‑1 (MQ=255)
                                                                                                                  cTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACTAAACCATACATAATAATCGCCTGTACaa                        <  1:123799/141‑1 (MQ=255)
                                                                                                                    cac‑‑aTATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACTAAACCATACATAATAATCGCCTGTACAATg                      >  1:605874/1‑141 (MQ=255)
                                                                                                                           ttatatTGAATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACTAAACCATACATAATAATCGCCTGTACAATGcatca                 <  2:142601/140‑1 (MQ=255)
                                                                                                                              tatTGCATACAAAGCGCTTGAACACCGTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACTAAACCATACATAATAATAGCCTGTACAATGCATCATTa              <  1:421224/141‑1 (MQ=255)
                                                                                                                                  gCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACTAAACCATACATAATAATCGCCTGTACAATGCATCATTAACaa          <  1:691673/141‑1 (MQ=255)
                                                                                                                                   cATACAAAGCTCTTGAACACCTTTATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACTAAACCATACATAATAATCGCCTGTACAATGCATCATTAACAAg         <  1:251712/141‑1 (MQ=255)
                                                                                                                                    aTACAAAGTTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACTAAACCATACATAATAATCGCCTGTACAATGCATCATTAACAAGt        <  1:230763/141‑1 (MQ=255)
                                                                                                                                    aTACAAAGTTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACTAAACCATACATAATAATCGCCTGTACAATGCATCATTAACAAGt        <  1:666775/141‑1 (MQ=255)
                                                                                                                                    aTACAAAGTTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACTAAACCATACATAATAATCGCCTGTACAATGCATCATTAACAAGt        <  1:465067/141‑1 (MQ=255)
                                                                                                                                    aTACAAAGCTCTTGAACACCTTGATATAACAGGCCCATGATGGTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACTAAACCATACATAATAATCGCCTGTACAATGCATCATTAACAAGt        >  2:522017/1‑141 (MQ=37)
                                                                                                                                        aaaGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACTAAACCATACATAATAATCGCCTGTACAATGCATCATTAACAAGTCACt    <  2:188666/141‑1 (MQ=255)
                                                                                                                                          aGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACTAAACCATACATAATAATCGCCTGTACAATGCATCATTAACAAGTCACTGa  >  1:431089/1‑141 (MQ=255)
                                                                                                                                          aGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACTAAACCATACATAATAATCGCCTGTACAATGCATCATTAACAAGTCACTGa  <  1:657184/141‑1 (MQ=255)
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CAATAAATGCAATTCTATATTGTTCGGTTTTTAAAAGCAATGAAAAAAAGCGAGTTAATAAAAAGTTAAGATTGTTGTTAACTTTATGTATAATGAGTTTTTTATTATTTGAAACTCAC‑‑ATATATATTGCATACAAAGCTCTTGAACACCTTGATATAACAGGCTTGTATTTTTTATACTTACTTTTTAAATTAAATTCAAATTCATCTAATTTAAAACAATATACTAAACCATACATAATAATCGCCTGTACAATGCATCATTAACAAGTCACTGA  >  CP000730/2632255‑2632531

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: