| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 2699163 = | 72 (0.780) | 23 (0.260) +TAGTGT |
3/268 | 9.9 | 24.8% | intergenic (+67/‑224) | copA/merP | P‑ATPase superfamily P‑type ATPase copper (Cu2+) transporter/MerTP family mercury (Hg2+) permease, binding protein MerP |
| ? | CP000730 | = 2699363 | 74 (0.810) | intergenic (+267/‑24) | copA/merP | P‑ATPase superfamily P‑type ATPase copper (Cu2+) transporter/MerTP family mercury (Hg2+) permease, binding protein MerP | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
CTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/2699293‑2699163‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAAC < CP000730/2699363‑2699234 |||||| CTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAATCCGTgagtttctt > 2:571264/1‑132 TTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTGTTATTTATACTAAGTAATGGCTCTTATGCAGATGGAGCGCAGATCCAAGAGTAAACCGTggagttataattg > 2:337635/1‑128 ATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATT > 1:170148/1‑141 ATTAGTGGCTCTTATGCAGCTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTATCATAATTAGTGGCTCTTATGCAGTTGGAGCGCAGATCCAACTGTAAACCGGAGTGTACTTATTATTTATAATAATT > 1:554001/1‑141 TGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTTATTATGATTTATACTAACTAGTtg > 2:821783/1‑139 TGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTCTTTATAATAATTAGTGG > 1:715277/1‑141 atCAGTTGGAGCGAAGATCCAACTGTAAACCGAAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGC < 1:742176/139‑1 agtAGTTTGAGCGAAGATCCTATTGTAAACCGTGGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGC < 2:814121/138‑1 TGCCGTTGGCGCAAAGATCCAACTGTAAGCCGTGGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGCGCGAAGCTCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGC < 1:267923/141‑1 GTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATGTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTT < 1:24925/141‑1 AGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGCGGCGTAATTATTATTAAGAATAATCAGTGGCTATTATGCCATAGGAGCCAAGA > 2:381315/1‑141 tttttaggcACTTATTATTTATAATAATTAGTGGATCTTATGCAGTTTGAGCGAAGATACAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCG < 2:885528/132‑1 AGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTCGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAAactcgac > 1:458262/1‑134 taaTATTTATCATACTTATTGTCTCTCATGCTGTTGGAGCGAAGATCCAACTCTAAACCGTAGTGCACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTAT < 2:561498/138‑1 taaTATTTATAATAATTAGGAGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTACAATACTTAATGGCTCTTCTGCGGCCAAGTCGAAGATCCAACTGTAAACCGTAGTGTACTTAT < 1:234630/138‑1 ATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGGAGATCCAACTGTTAATCGTAGTGTGCTTATATTTTATAATAATT > 1:358666/1‑141 GCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAACGTAATTATTATTTATAATAATTAGTTGCT > 2:821184/1‑141 tttTTATGCAGCTGGTGCGAAGATCCAACCGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTC < 2:156007/138‑1 TTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTA > 1:96406/1‑141 ATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATG > 1:94581/1‑141 tgtAGTTGGAGAGAAGATACACCTGTAATCCGTAGTTTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGATGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGC < 2:366104/138‑1 TGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGC < 1:580984/141‑1 GTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTT < 1:999165/141‑1 AGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGA > 1:892242/1‑141 agtagaacggAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGT < 1:75154/131‑1 AACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGATAGATGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAAC < 1:771930/141‑1 |||||| CTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/2699293‑2699163‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGTAGTGTACTTATTATTTATAATAATTAGTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAAC < CP000730/2699363‑2699234 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |