New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 300188 =97 (1.060)4 (0.050) 3/260 9.7 4.0% coding (455/717 nt) ispD 2‑C‑methyl‑D‑erythritol 4‑phosphate cytidylyltransferase
?CP000730 300250 = 104 (1.220)coding (517/717 nt) ispD 2‑C‑methyl‑D‑erythritol 4‑phosphate cytidylyltransferase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGTCATTGTGACACATGATGCAGTTAGACCATTTTTAACGCATCGTATTATTAAAGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGTTGAGTGATGAGCAAAAGAGTATTTTATCTGATGCTTGTAA  >  CP000730/300048‑300323
                                                                                                                                            |                                                                                                                                       
tgTCATTGTGACACATGATGCAGTTAGACCATTTTTAACGCATCGTATTATTAAAGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCa                                                                                                                                         <  1:688421/141‑1 (MQ=255)
tgTCATTGTGACACATGATGCAGTTAGACCATTTTTAACGCATCGTATTATTAAAGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCa                                                                                                                                         >  2:958950/1‑141 (MQ=255)
           cacaTGATGCAGTTAGACCATTTTTAACGCATCGTATTATTAAAGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATg                                                                                                                              >  1:712749/1‑141 (MQ=255)
            acaTGATGCAGTTAGACCATTTTTAACGCATCGTATTATTAAAGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATGCAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGc                                                                                                                             <  1:597586/141‑1 (MQ=255)
            acaTGATGCAGTTAGACCATTTTTAACGCATCGTATTATTAAAGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGc                                                                                                                             <  1:455279/141‑1 (MQ=255)
            aaatgatgCAGTTAGACCATTTTTAACGCATCGTATTATTAAAGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGc                                                                                                                             <  1:381128/139‑1 (MQ=255)
                tatgCAGTTAGACCATTTTTAACGCATCGTATTATTAAAGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAAtt                                                                                                                         <  1:176127/140‑1 (MQ=255)
                gatgCAGTTAGACCATTTTTAACGCATCGTATTATTAAAGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAAtt                                                                                                                         >  1:154430/1‑141 (MQ=255)
                gatgCAGTTAGACCATTTTTAACGCATCGTATTATTAAAGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGAGGCAAtt                                                                                                                         >  2:777278/1‑141 (MQ=255)
                gaagcagacaGACCCTCTTTAACGCATCGCATTAATAAAAAAAATATTCAAGCTGCATTAGAGTACGGTGCAGTAGAAACAGTGATTGATGCTATAGATACGCTTGTTACATATAAAAAAAATCAAACGAGTGATGCAAtt                                                                                                                         >  2:949968/10‑141 (MQ=255)
                 atgCCGTTAGACCATTTTTAACGCATCGTATTATTAAAGAAAATATTCCCGCCGCTTCACAGTACGGTACAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGAGGCAATTc                                                                                                                        >  1:678296/1‑141 (MQ=255)
                 atgCAGTTAGACCATTTTTAACGCATCGTATTATTAAAGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTc                                                                                                                        >  1:380606/1‑141 (MQ=255)
                      gTTAGACCATTTTTAACGCATCGTATTATTAAAGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTg                                                                                                                   >  2:411538/1‑141 (MQ=255)
                            ccATTTTTAACGCATCGTATTATTAAAGAAAATATTCAAGCTGCTTTAGAGTGCGGTGTAGTAGATACAGTGATTGATGCTATAGCTACGAGTGTTACATCTAAAGTGATTCAGACGATTGTGGCATTTCCAGTGCGTAAt                                                                                                             >  2:545878/1‑141 (MQ=255)
                                ttttAACGCATCGTATTATTCAAGAAAAGATTCAAGCTGCTTTAGCGTACGGTGCCGTAGATACAGTGATTGATGCTATAGATACGCTGCTTACATCTAAAGATAATCAAACGATTGATCCAATACCAGTCCGTAATGaaa                                                                                                         >  1:60220/1‑141 (MQ=255)
                                ttttAACGCATCGTATTATTAAAGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGaaa                                                                                                         >  1:22839/1‑141 (MQ=255)
                                ttttAACGCATCGTATTATTAAAGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGaaa                                                                                                         <  1:484725/141‑1 (MQ=255)
                                ttttAACGCATCGTATTATTAAAGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTCTTACATCTAAAGATAATCAACCGATGGATGCAATTCCAGTGCGTAATGaaa                                                                                                         <  2:705104/141‑1 (MQ=255)
                                  ttAACGCATCGTATTATTAAAGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATg                                                                                                       <  2:645846/141‑1 (MQ=255)
                                     aCGCATCGTATTATTAAAGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTAc                                                                                                    >  2:386093/1‑141 (MQ=255)
                                     aCGCATCGTATTATTAAAGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTAc                                                                                                    >  1:653710/1‑141 (MQ=255)
                                     aCGCATCGTATTATTAAAGAAAATATTCAAGCTGCTTTAGAGTACGGTACAGTAGCTACAGTGATTGATGATATAGATACGATTGTTACATCTAAAGCTAATCAAACGCATGATGCAATTCCAGTGCGTAATGAAATGTAc                                                                                                    >  2:329829/1‑141 (MQ=255)
                                      cGCATCGTATTATTAAAGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTGAAGATAATCAAACGATTGATGCAATTACAGTCCGTAATGAAATGTAcc                                                                                                   >  1:568556/1‑141 (MQ=255)
                                          tCGTATTATTAAAGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAgg                                                                                               >  2:261044/1‑141 (MQ=255)
                                                 attaAAGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAaca                                                                                        <  1:265302/141‑1 (MQ=255)
                                                 attaAAGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAaca                                                                                        <  1:537137/141‑1 (MQ=255)
                                                 attaAAGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAaca                                                                                        <  1:672250/141‑1 (MQ=255)
                                                  ttaAAGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAacac                                                                                       <  1:554306/141‑1 (MQ=255)
                                                   taAAGAAAATATTCAAGCTGCTTTAGTGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAACATAATCAAACGATTGATGCAATTCCAGTGCGTAATGACATGTACCAAGGTCAAACAcc                                                                                      <  1:605987/141‑1 (MQ=255)
                                                   taAAGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACAcc                                                                                      <  1:829248/141‑1 (MQ=255)
                                                    aaaGAAAATATTCAAGGTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCt                                                                                     <  2:975631/141‑1 (MQ=255)
                                                    aaaGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCt                                                                                     <  2:975632/141‑1 (MQ=255)
                                                    aaaGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGAGTCCTGAAATGTACAAAACTCGAACACCt                                                                                     >  2:999409/1‑141 (MQ=255)
                                                    aaaGAAAATATGCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTAGAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCt                                                                                     <  2:395740/141‑1 (MQ=255)
                                                          aaTATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTTTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAATACCTCAATCg                                                                               <  1:721909/141‑1 (MQ=255)
                                                          aaTATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCg                                                                               <  2:63520/141‑1 (MQ=255)
                                                              ttCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTa                                                                           >  1:69653/1‑141 (MQ=255)
                                                              ttCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTa                                                                           <  1:411538/141‑1 (MQ=255)
                                                               tCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTaa                                                                          >  1:141788/1‑141 (MQ=255)
                                                               tCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTaa                                                                          >  1:369970/1‑141 (MQ=255)
                                                                taaGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGATATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCTAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAat                                                                         <  1:77612/140‑1 (MQ=255)
                                                                cAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAat                                                                         <  1:536472/141‑1 (MQ=255)
                                                                cAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAat                                                                         >  1:50846/1‑141 (MQ=255)
                                                                cAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAAGGTACCAAGGTCAAACACCTCAATCGTTTAat                                                                         <  1:278080/141‑1 (MQ=255)
                                                                 aaGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTAAAGAGACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAata                                                                        <  1:428478/141‑1 (MQ=255)
                                                                 aaGCTGCCTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAata                                                                        <  2:370204/141‑1 (MQ=255)
                                                                     tgctTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTaa                                                                    >  2:910741/1‑141 (MQ=255)
                                                                      gctTTAGAGGACGGTGCAATAGATACAGTTATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACATCTCAATCGTTTAATATTAAt                                                                   <  1:837289/141‑1 (MQ=255)
                                                                      gccttAGAGTACGGTGCAGTAGATACAGTGATTGAAGCTATAGATACGATTGTTCCATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAAt                                                                   <  1:823069/138‑1 (MQ=255)
                                                                       ctTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAAtt                                                                  >  2:175030/1‑141 (MQ=255)
                                                                           agagTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATttatt                                                              <  2:101025/141‑1 (MQ=255)
                                                                            gagTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATttatta                                                             <  1:700802/141‑1 (MQ=255)
                                                                            gagTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGCTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATttatta                                                             >  2:547313/1‑141 (MQ=255)
                                                                            gagTACGGTACAGTGGATAAAGTGATTGAAGCTATAGATACGATTCCAAGATCTAAAGGTAATCGAACGATTGATGCAATTCCAGTGCGAAATGAAATGTACCAAGGACAAACACCTCAAGCGGTTAATATCAAttaaata                                                             >  2:547381/1‑136 (MQ=255)
                                                                             agTACGGTGCAGTGGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCGAACGATTGATGCAAACCCAGTGAGAAATGAAATGTACCACGGTCAAACACCCCAATCGTTTAATATTAATTTATTaa                                                            >  2:768353/1‑141 (MQ=255)
                                                                             agTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTaa                                                            >  2:894198/1‑141 (MQ=255)
                                                                             agTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTaa                                                            <  2:712749/141‑1 (MQ=255)
                                                                             agTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTaa                                                            >  1:251520/1‑141 (MQ=255)
                                                                             agTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTaa                                                            >  2:130046/1‑141 (MQ=255)
                                                                             agTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTaa                                                            >  1:641272/1‑141 (MQ=255)
                                                                                      cAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCt                                                   >  2:166890/1‑141 (MQ=255)
                                                                                      cAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCt                                                   >  1:807193/1‑141 (MQ=255)
                                                                                        gTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTAt                                                 >  1:119651/1‑141 (MQ=255)
                                                                                          aGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGc                                               <  2:67426/141‑1 (MQ=255)
                                                                                          aGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGc                                               <  1:965632/141‑1 (MQ=255)
                                                                                              aCAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAg                                           >  2:124904/1‑141 (MQ=255)
                                                                                                    attgatGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGtcaagg                                     >  2:216974/1‑136 (MQ=255)
                                                                                                    attgatGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGTTGAgg                                     >  2:389274/1‑140 (MQ=255)
                                                                                                    attgatGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGGTGAGt                                     >  2:242936/1‑141 (MQ=255)
                                                                                                     ttgatGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGTTGAGtg                                    >  1:603339/1‑141 (MQ=255)
                                                                                                         tGCTATAGATACGATTGTTACCTCTAAAGAGAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGTTGAGtgatga                                <  1:924469/141‑1 (MQ=255)
                                                                                                         tGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACCGTTGAGtgatga                                <  1:837935/141‑1 (MQ=255)
                                                                                                         tGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGTTGAGtgatga                                <  1:635856/141‑1 (MQ=255)
                                                                                                         tGCTATAGATACGATTGTCACATCTAAAGATCAACAAACGATTGATGGCATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTGAATATTAATTTATTAAAAGAAAGCTATGCACAGTTGAGtgatga                                <  1:242422/141‑1 (MQ=255)
                                                                                                         tGCTATAGATACGAGTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGTTGAGtgatga                                <  1:242395/141‑1 (MQ=255)
                                                                                                          gCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGTTGAGTGATGAg                               <  2:380606/141‑1 (MQ=255)
                                                                                                           cTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGTTGAGTGATGAGc                              >  2:928355/1‑141 (MQ=255)
                                                                                                           cTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGAACAGTTGAGTGATGAgg                              >  1:219544/1‑140 (MQ=255)
                                                                                                             ataGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCTAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGtt                                         >  2:739884/1‑128 (MQ=255)
                                                                                                             ataGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCTAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGtt                                         <  1:739884/128‑1 (MQ=255)
                                                                                                                gATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGTTGAGTGATGAGCAAAag                         >  1:620261/1‑141 (MQ=255)
                                                                                                                 aTACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGTTGAGTGATGAGCAAAaga                        <  1:359555/141‑1 (MQ=255)
                                                                                                                     gATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGTTGAGTGATGAGCAAAAGAGTAt                    <  1:109614/141‑1 (MQ=255)
                                                                                                                        tGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGTTGAGTGATGAGCAAAAGAGTAtttt                 >  1:253670/1‑141 (MQ=255)
                                                                                                                        tGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGTTGAGTGATGAGCAAAAGAGTAtttt                 >  1:783924/1‑141 (MQ=255)
                                                                                                                         gTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGTTGAGTGATGAGCAAAAGAGTATTTTa                >  1:705017/1‑141 (MQ=255)
                                                                                                                         gTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGTTGAGTGATGAGCAAAAGAGCATATTa                >  2:741035/1‑141 (MQ=255)
                                                                                                                          ttACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGTTGAGTGATGAGCAAAAGAGTATTTTAt               >  2:143242/1‑141 (MQ=255)
                                                                                                                          ttACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGTTGAGTGATGAGCAAAAGAGTATTTTAt               >  2:169394/1‑141 (MQ=255)
                                                                                                                             cATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGTTGAGGGATGAGCAAAAGAGTATTTTATCTg            >  1:953113/1‑141 (MQ=255)
                                                                                                                               tCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGTTGAGTGATGAGCAAAAGAGTATTTTATCTGAt          <  2:22839/141‑1 (MQ=255)
                                                                                                                               ccTAAAAATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGTTGAGTGATGAGCAAAAGAGTATTTTATCTGAt          <  2:60220/140‑1 (MQ=255)
                                                                                                                                 tAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGTTGAGTGATGAGCAAAAGAGTATTTTATCTGATGc        <  1:166890/141‑1 (MQ=255)
                                                                                                                                 tAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGTAGAGTGATGAGCAAAAGAGTATTTTATCTGATGc        <  2:807193/141‑1 (MQ=255)
                                                                                                                                      aTAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGTTGAGTGATGAGCAAAAGAGTATTTTATCTGATGCTTGTa   <  1:857580/141‑1 (MQ=255)
                                                                                                                                       tAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGTTGAGTGATGAGCAAAAGAGTATTTTATCTGATGCTTGTaa  >  1:513089/1‑141 (MQ=255)
                                                                                                                                       tAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATATATTAAAAGAAAGCTATGCACAGTTGCATGATGAGCAAACGAGTAGTTTATCTGACGccggtac  >  2:433378/1‑135 (MQ=255)
                                                                                                                                            |                                                                                                                                       
TGTCATTGTGACACATGATGCAGTTAGACCATTTTTAACGCATCGTATTATTAAAGAAAATATTCAAGCTGCTTTAGAGTACGGTGCAGTAGATACAGTGATTGATGCTATAGATACGATTGTTACATCTAAAGATAATCAAACGATTGATGCAATTCCAGTGCGTAATGAAATGTACCAAGGTCAAACACCTCAATCGTTTAATATTAATTTATTAAAAGAAAGCTATGCACAGTTGAGTGATGAGCAAAAGAGTATTTTATCTGATGCTTGTAA  >  CP000730/300048‑300323

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.