Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP000730111,5120AG28.9% 163.8 / 76.7 121S194S (TCA→TCG) USA300HOU_0110possible staphylococcal tandem lipoprotein
Reads supporting (aligned to +/- strand):  ref base A (36/50);  new base G (16/19);  total (52/69)
Fisher's exact test for biased strand distribution p-value = 8.40e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 122 total aligned reads displayed.

TACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGT‑TGAAAGGTACAGGGAATTTAAAAGGTTCATCAGTTGGATATAAAAAAAT  >  CP000730/111374‑111652
                                                                                                                                          |                                                                                                                                             
tACTGAAGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAGTGATTTATAAAGATGGAGATATATCATATAATCCAGAGGCGCCGTGTTAGTCAGc                                                                                                                                             >  2:503578/1‑141 (MQ=21)
   tGAGGAAGTTAAAGACGACATCTATCTGAAATAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCa                                                                                                                                          >  1:988480/1‑141 (MQ=21)
     aGGAAGTTAAAGAAGAAAAGATAAAAAATGAGGACGAAAACTTTAAGTTTTTTGCGCAAAATAGCAATTTTAAAGATTTAATGAATTATGAAGATGGAGATATATAATATAATCCAGAGGTGCCGAGGTATTAAGTCCAat                                                                                                                                        >  2:657837/1‑141 (MQ=21)
      ggAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCACTTTTACAGATTTAATGAATCATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAata                                                                                                                                       <  1:476260/141‑1 (MQ=255)
      ggAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAata                                                                                                                                       <  1:939895/141‑1 (MQ=255)
      agAAGTTAAAGAAGAAAACAAAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAata                                                                                                                                       <  1:507594/140‑1 (MQ=255)
           ttAAAGAAGAAAACAAAAAAAAAGAAAGCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAAt                                                                                                                                  <  2:573402/141‑1 (MQ=255)
            tAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAAtt                                                                                                                                 >  1:635085/1‑141 (MQ=255)
            tAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAAtt                                                                                                                                 >  1:829947/1‑141 (MQ=255)
             aaaGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTa                                                                                                                                >  1:554996/1‑141 (MQ=255)
             aaaGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTa                                                                                                                                >  2:958043/1‑141 (MQ=255)
             aaaGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTa                                                                                                                                >  2:69432/1‑141 (MQ=255)
              aagaagAAAACAAAAAAAAAGTAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTaa                                                                                                                               >  1:515142/1‑141 (MQ=255)
                ggaggagaCATAAAGAAAGAAATCGAAACCTTTAAGTCTTTTGCGCAATAGAGGAATTGTAAAGATTTAAGGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACt                                                                                                                             <  1:994056/134‑1 (MQ=17)
                gaagaaAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACt                                                                                                                             >  1:865229/1‑141 (MQ=255)
                   gaaAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACTAat                                                                                                                          >  2:9664/1‑141 (MQ=255)
                   gaaAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACTAat                                                                                                                          >  1:418497/1‑141 (MQ=255)
                    aaaaCATAAAAAAAGAAATGGAAAGCTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGGGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAatg                                                                                                                         <  2:144131/141‑1 (MQ=255)
                    aaaaCATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCCACAGAGCAATTTTAAAGATTTAATGAATTATAAAGATGTAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAatg                                                                                                                         <  2:479882/141‑1 (MQ=255)
                    aaaaCATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAGGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCGATATCAATTAACTAatg                                                                                                                         <  2:359294/141‑1 (MQ=255)
                    aaaaCATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATAAATTAACTAatg                                                                                                                         >  2:846108/1‑141 (MQ=255)
                     aaaCATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAatga                                                                                                                        <  1:333575/141‑1 (MQ=255)
                     aaaCATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTGAATGGATTAGAAAGATGGAGATAGATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAatga                                                                                                                        <  1:189157/141‑1 (MQ=255)
                      aaCATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACTAatgat                                                                                                                       <  2:70798/141‑1 (MQ=255)
                      aaCATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACTAatgat                                                                                                                       <  2:841199/141‑1 (MQ=255)
                      aaCATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATACCAATTAACTAatgat                                                                                                                       <  1:390071/141‑1 (MQ=255)
                      aaCATAAAAAAAGAAATCGAAAACGTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAGTGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATAAATTAACTAatgat                                                                                                                       >  2:9592/1‑141 (MQ=17)
                      aaCATAAAAAAACTAATCGAAAACTTTAAGTTTTTTGTGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATAATATAACCCAGCGGTGCCGAGTCATTCGGCTAAATATCAATTAACTAatgat                                                                                                                       <  2:252826/141‑1 (MQ=17)
                       aCATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACTAatgatg                                                                                                                      >  1:147109/1‑141 (MQ=255)
                          tAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATACCAATTAACTAATGATGAtt                                                                                                                   >  1:536277/1‑141 (MQ=255)
                          tAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAAATATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGATATTCGGCTAAATATCAATTAACTAATGATGAtt                                                                                                                   >  2:302653/1‑141 (MQ=255)
                           aaaaaaaGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATta                                                                                                                  >  2:223033/1‑141 (MQ=255)
                            aaaaaaGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATtat                                                                                                                 >  2:620319/1‑141 (MQ=255)
                            aaaaaaGAAATCGAAAAATTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATtat                                                                                                                 <  2:464262/141‑1 (MQ=255)
                             aaaaaGAAATCGAAATCTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATtata                                                                                                                <  1:354597/141‑1 (MQ=255)
                             aaaaaGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATtata                                                                                                                <  1:844002/141‑1 (MQ=255)
                              aaaaGAAATCGAAAACTTTAAGTTTTTTGCACAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATCGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATaa                                                                                                               <  1:112214/141‑1 (MQ=255)
                              aaaaGAAACCGAAAACTTTAAGTTTTTTGCGCATTATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATaa                                                                                                               <  1:112213/141‑1 (MQ=255)
                                  gAAATCGACATCTTTAAGTATTATGCACAATATAGTAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCAAAAAATCAGTTACCTAATGATGATTATAATGTa                                                                                                           <  2:9155/141‑1 (MQ=18)
                                  gAAATCGAAAACTTTAAGTTTTTTTCTTAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTTAACTCAAAATCAATAAACTATTGATGATATTATTGTa                                                                                                           >  2:525618/1‑141 (MQ=18)
                                  gAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTa                                                                                                           <  1:78418/141‑1 (MQ=255)
                                  gAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTa                                                                                                           >  2:797171/1‑141 (MQ=255)
                                   aaaTCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACTAATGATGATTATAATGTaa                                                                                                          >  1:768803/1‑141 (MQ=255)
                                   aaaTCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTaa                                                                                                          <  2:409093/141‑1 (MQ=255)
                                    aaTCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACTAATGATGATTATAATGTaaa                                                                                                         <  2:721382/141‑1 (MQ=255)
                                    aaTCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGAGGGAGATATATCATATCATCCATAGGTGCCGAGTTATTCGGCTAAATATCAATTAACTAATGATTATTATAATGTaaa                                                                                                         <  2:177374/141‑1 (MQ=17)
                                     aTCGAAAACTTTAAGTTTTTTTTTTTTTTTTTCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATTTATAATATAATCCAGAGGTTCCGAGTTATTCAACTCAATATCAATTAACTATTTATGATTATAATTTaata                                                                                                        >  2:347287/1‑139 (MQ=255)
                                     aTCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTaaaa                                                                                                        >  1:825257/1‑141 (MQ=255)
                                      tCGAAAACTTTAAGTTGTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTGATTCGGCTAAATATCAATTAACTAATGATGATTATGATGTAAAAc                                                                                                       >  2:324037/1‑141 (MQ=17)
                                          acaCTTTAAGTTTTGTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATCTCAATTAACTAATGATGATTATAATGTAAAACAAtt                                                                                                   <  2:422146/139‑1 (MQ=255)
                                             cTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACg                                                                                                <  1:662602/141‑1 (MQ=255)
                                              tttAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACgc                                                                                               <  2:515142/141‑2 (MQ=255)
                                              tttAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATACCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACgc                                                                                               <  1:232745/141‑2 (MQ=255)
                                              ttaagtggttttGGGCAATATAGCAATTTAAAAGATTTAATGAATTAGAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATCTCAATTAGCTAATGATGATTATAATGTAAAACAATTACgc                                                                                               <  2:300793/133‑2 (MQ=17)
                                               ttAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAGTATCAATTAACTAATGATGATTTTAATATAAAACAATTACATa                                                                                              >  2:41841/1‑141 (MQ=255)
                                                tAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTaa                                                                                             <  1:360438/141‑1 (MQ=255)
                                                tAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTaa                                                                                             <  2:323807/141‑1 (MQ=255)
                                                 aaGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTaaa                                                                                            >  1:671774/1‑141 (MQ=255)
                                                         tGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGCAAAAGATATGa                                                                                    <  1:847745/141‑1 (MQ=255)
                                                            cgcgtacagacaTTGTAAATCTTTAACCAATTACAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAACTCAATATCAATGAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACAt                                                                                 <  1:347356/130‑1 (MQ=14)
                                                                  taGCAATTTTGAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATAAACTGCTGATGATTATAATGTAAAACAATTACGCAAAAGATATGATATACcgac                                                                           <  2:907786/141‑1 (MQ=11)
                                                                  taGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGCAAAAGATATGATATAccgac                                                                           <  2:760177/141‑4 (MQ=11)
                                                                    gCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACcaacaa                                                                         <  2:588029/141‑1 (MQ=255)
                                                                    gCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACcaacaa                                                                         <  1:223033/141‑1 (MQ=255)
                                                                             aaGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACTAATGATGATTATAATGTAAAACAATTAAGAAAAAGATATTATATACGGACGAATAAAgctc                                                                >  2:479695/1‑139 (MQ=11)
                                                                               gATTTAATGAATTATACAGGTAGTAAGAAATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCg                                                              >  2:214201/1‑141 (MQ=17)
                                                                                 tttAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGaa                                                            <  1:14694/141‑1 (MQ=255)
                                                                                    aaTGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAACCAATTACGTAAAAGATATGACATACCAACAAATAAACCGCCGAAGCt                                                         >  1:103367/1‑141 (MQ=255)
                                                                                       aaaTTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCtgtt                                                      <  1:653306/140‑1 (MQ=255)
                                                                                          ttATAAAGATGGAGATATATAATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTtttgt‑t                                                  >  1:601713/1‑141 (MQ=255)
                                                                                             taAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGT‑TGaa                                               <  1:325141/141‑1 (MQ=255)
                                                                                             taAAGATGGAGATACATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGT‑TGaa                                               <  1:173116/141‑1 (MQ=255)
                                                                                              acaGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACGAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGT‑TGaaa                                              <  2:877745/139‑1 (MQ=255)
                                                                                              aaaGATGGAGATATCTCATATAATCCAGCGGTGCCGTGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACCTACCAACAAAGAGCGCGCAGCAGCagttgggcaag                                               >  1:687457/1‑135 (MQ=14)
                                                                                                      agaTATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGT‑TGAAAGGTACAgg                                      >  1:615663/1‑141 (MQ=255)
                                                                                                                   aaTCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGGTGGTGT‑TTATAGGTACAGGGAATTTAAAAGGt                         >  1:566670/1‑141 (MQ=255)
                                                                                                                   aaTACAGAAGTCACGAATTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAAAAAATAAAGCTCAGCAG‑TTTTGTATGAAAGGTACAGGGAATTTAAAAGGt                         >  2:449245/1‑141 (MQ=14)
                                                                                                                     tCCATAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAACGCCGTAGCTGTTGT‑TGAAAGGTACAGTGAATTTAAAAGGTtc                       >  1:700573/1‑141 (MQ=255)
                                                                                                                      ccAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGT‑TGAAAGGTACAGGGAATTTAAAAGGTtca                      <  1:899002/141‑1 (MQ=255)
                                                                                                                      ccAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGT‑TGAAAGGTACAGGGAATTTAAAAGGTtca                      <  2:539814/141‑1 (MQ=255)
                                                                                                                        agatGTGCCGAGTTATGCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGCAGCTGTTGT‑TGAAAGGTACAGGGAATTTAAAAGGTtcatc                    <  2:527362/141‑1 (MQ=255)
                                                                                                                        agagGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGT‑TGAAAGGTACAGGGAATTTAAAAGGTtcatc                    <  1:273101/141‑1 (MQ=255)
                                                                                                                        agagGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGT‑TGAAAGGTACAGGGAATTTAAAAGGTtcatc                    <  1:194754/141‑1 (MQ=255)
                                                                                                                        agagGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGT‑TGAAAGGTACAGGGAATTTAAAAGGTtcatc                    <  2:954212/141‑1 (MQ=255)
                                                                                                                        agagGTGCCGAGTTATTCAGCTCAATATCAATTAACTAACGATGCTTCGTATGAAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGT‑TGAAAGGTACAGGGAATTTAAAAGGTtcatc                    <  1:468817/141‑1 (MQ=17)
                                                                                                                          agGTTCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAGTTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGATGCTGTTGT‑TGAAAGATACAGGGAATTTAAAAGGTTCATCAg                  >  1:601289/1‑141 (MQ=255)
                                                                                                                            gTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGT‑TGAAAGGTACAGGGAATTTAAAAGGTtcatacgtt                >  2:591911/1‑136 (MQ=255)
                                                                                                                            gTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGT‑TGAAAGGTACAGGGAATTTAAAAGGTTCATCAGtg                >  2:930952/1‑140 (MQ=255)
                                                                                                                             tGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGT‑TGAAAGGTACAGGGAATTTAAAAGGTTCATCAGTTg               >  1:897286/1‑141 (MQ=255)
                                                                                                                              gCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTACAAGCTATGACATACCAACAAATAAAGCGTCGAAGCTGTTGT‑TGAAAGGTAAAGGGAATTTAAAAGGTTCATCAGTTgg              >  2:602254/1‑141 (MQ=255)
                                                                                                                              gCCAAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGGCGTTGT‑TGAAAGGTACAGGGAATTTAAAAGGTTCAACAGTTgg              >  2:432222/1‑141 (MQ=255)
                                                                                                                                     tATTCACCTCAACATCAATTAATTAATGAATATTATAATGTACAACAATTAAGTAAAAGATATGACATACCAACAAATAAAGCGCTGAAGCTGTTGT‑TGAAAGCTACAGGGAATTTAAAAGGTTCCTCAGTTGTATATaaa       <  2:110122/141‑1 (MQ=14)
                                                                                                                                     tATTAAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGT‑TGAAAGGTACAGGGAATTTAAAAGGTTCATCAGTTGGATATaaa       <  1:206233/141‑1 (MQ=255)
                                                                                                                                      aTTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGT‑TGAAAGGTACAGGGAATTTAAAAGGTTCATCAGTTGGATATaaaa      >  1:878004/1‑141 (MQ=255)
                                                                                                                                       ttCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGT‑TGAAAGGTACAGGGAATTTAAAAGGTTCATCAGTTGGATATaaaaa     <  1:797171/141‑1 (MQ=255)
                                                                                                                                       ttCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGT‑TGAAAGGTACAGGGAATTTAAAAGGTTCATCAGTTGGATATaaaaa     <  1:525618/141‑1 (MQ=255)
                                                                                                                                       ttCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGT‑TGAAAGGTACAGGGAATTCAAAAGGGTCATCAGTTGGATATaaaaa     >  1:668384/1‑141 (MQ=255)
                                                                                                                                       ttCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAAAAATTACGTAAAAGATATGAAATACCAACAAATAAAGAGCCGAAGCTGTTGA‑TGAAAGGTACAGGGAATGTAAAAGGTTCATCAGTTGGATATaaaaa     >  2:983789/1‑141 (MQ=17)
                                                                                                                                         cAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGT‑TGAAAGGTACAGGGAATTTAAAAGGTTCATCAGTTGGATATaaaaaaa   >  1:218119/1‑141 (MQ=255)
                                                                                                                                          aGCTCAATATACATGAACTAATGATGATTATAATGTAAAACAATTACGTAAAATATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGT‑TGAAAGGTACAGGGAATTTAAAAGGTTCATCAGTTGGATATAAAAAAAt  <  2:399226/141‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                             
TACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGT‑TGAAAGGTACAGGGAATTTAAAAGGTTCATCAGTTGGATATAAAAAAAT  >  CP000730/111374‑111652

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑