Predicted mutation
evidence seq id position mutation annotation gene description
RA CP000730 2,358,585 G→C D111E (GAC→GAG rpoA ← DNA‑directed RNA polymerase alpha subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007302,358,5850GC100.0% 396.8 / NA 116D111E (GAC→GAGrpoADNA‑directed RNA polymerase alpha subunit
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (54/62);  total (54/62)

Only 100 of 116 total aligned reads displayed.

CTAGTATTATTTTGTTCTGCTAATGCGTAACCTCTACCCTTGTTAGCAACTAGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATGTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATGTTCATAATAATTGTAGAAACATCTTCAACTACATTGTCTACTGCTG  >  CP000730/2358448‑2358721
                                                                                                                                         |                                                                                                                                        
cTAGTATTATTTTGTTCTGCTAATGCGTAACCTCTACCCTTGTTAGCAACTAGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCg                                                                                                                                       <  2:853140/141‑1 (MQ=255)
       tattTTGTTCTGCTAATGCGTAACCTCTACCCTTGTTAGCAACTAGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTg                                                                                                                                >  1:773289/1‑141 (MQ=255)
          tttGTTCTGCTAATGCGTAACCTCTACCCTTGTTAGCAACTAGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACAGCACTATCATGTGTAATCTCGCTTGCTGttt                                                                                                                             >  2:628655/1‑140 (MQ=255)
                cTGCTAATGCGTAACCTCTACCCTTGTTAGCAACTAGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGc                                                                                                                       >  2:848519/1‑141 (MQ=255)
                cTGCTAATGCGTAACCTCTACCCTTGTTAGCAACTAGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGc                                                                                                                       >  1:484066/1‑141 (MQ=255)
                cTGCTAATGCGTAACCTCTACCCTTGTTAGCAACTAGACGAATTTTTAAGTGACCAAATTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATAACTATAATGTGTAATCTCGCTTGCTGTTACTTCGc                                                                                                                       >  1:781506/1‑141 (MQ=255)
                  gCTGATGCGTAACCTCGACCCTTGTTAGCAATAAGACAAATTTTTAAGTGACCACCTTTTTAGACTTTGGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCAGGTGTAATCTCGCTTGCTGTTACTTCGCCt                                                                                                                     >  2:453042/1‑141 (MQ=255)
                  gCTAATGCGTAACCTCTACCCTTGTTAGCAACTAGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGTTTGCTGTTACTTCGCCt                                                                                                                     <  2:517201/141‑1 (MQ=255)
                   cTAATGCGTAACCTCTACCCTTGTTAGCAACTAGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCCGTTACTTCGCCtt                                                                                                                    <  2:934584/141‑1 (MQ=255)
                    tAATGCGTAACCTCTTCCCTTGTTAGCAACTAGACGACTTTTTTAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTGCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTtc                                                                                                                   <  1:700830/141‑1 (MQ=255)
                    tAATGCGTAACCTCTACCCTTGTTAGCAACTAGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTtc                                                                                                                   <  1:281348/141‑1 (MQ=255)
                    tAATGCGTAACCTCTACCCTTGTTAGCAACTAGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTtc                                                                                                                   <  1:762589/141‑1 (MQ=255)
                    tAATGCGTAACCTCTACCCTTGTTAGCAACTAGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTtc                                                                                                                   <  1:883445/141‑1 (MQ=255)
                     aaTGCGTAACCTCTACCCTTGTTAGCAACTAGACGAATTTTTAAGTGACCACCTTTAGTTACTGTTGCAATTTTAAGCTCTGGGTTTAAAGTTTGAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTcca                                                                                                                  >  2:649027/1‑141 (MQ=255)
                     aaTGCGTAACCTCTACCCTTGTTAGCAACTAGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCttaa                                                                                                                  >  2:494912/1‑139 (MQ=255)
                      aTGCGTAACCTCTACCCTTGTTAGCAACTAGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCTTtcat                                                                                                                 >  2:548695/1‑141 (MQ=255)
                      aTGCGTAACCTCTACCCTTGTTAGCAACTAGACGAATTTGTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTtcat                                                                                                                 >  2:265122/1‑141 (MQ=255)
                        gCGTAACCTCTACCCTTGTTAGCAACTAGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTtcatca                                                                                                               >  1:905493/1‑141 (MQ=255)
                        gCGTAACCTCTACCCTTGTTAGCAACTAGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTtcatca                                                                                                               >  1:35153/1‑141 (MQ=255)
                         cGTAACCTCTACCCTTGTTAGCAACTAGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATATGTAATCTCGCTTGCTGTTACTTCGCCTGCCTCAc                                                                                                              >  1:121229/1‑141 (MQ=255)
                            aaCCTCTACCCTTGTTAGCAACTAGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGGTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCttcttcccata                                                                                                           >  1:402936/1‑136 (MQ=255)
                             aCCTCTACCCTTGTTAGCAACTAGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTAc                                                                                                          >  1:694833/1‑141 (MQ=255)
                               ctctACCCTTGTTAGCAACTAGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACAt                                                                                                        >  1:214083/1‑141 (MQ=255)
                               ctctACCCTTGTTAGCAACTAGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACAt                                                                                                        >  1:430012/1‑141 (MQ=255)
                                       ttGTTAGCAACTAGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCATTCTTATGTTTAATCTCGCTTGCTGTGACTTCGCCTTCATCACGTTCATCAATTTCt                                                                                                <  2:956701/141‑1 (MQ=255)
                                       ttGTTAGCAACTAGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCt                                                                                                <  2:840442/141‑1 (MQ=255)
                                       ttGTTAGCAACTAGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCt                                                                                                <  2:350629/141‑1 (MQ=255)
                                            aGCAACTAGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTCCATCAATTTCTAAAGt                                                                                           >  2:934960/1‑141 (MQ=255)
                                                  tAGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCCCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATAACGTACATCAATTTCTAAAGTTTTAtc                                                                                     >  2:787217/1‑141 (MQ=255)
                                                  tAGACGAATTTTGAAGTGAGCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTACACTGGCTAGCTGTCGGGTTGCCTTCATAACGTACATCAATTTCTAAAGTTTTAtc                                                                                     >  2:953082/1‑141 (MQ=255)
                                                   aGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATTTTTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTAtct                                                                                    <  1:136171/141‑1 (MQ=255)
                                                    gACGAATTTTTAAGTGACCACCTTTAGTTACTGTTTCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTGACTTCGCCTTCATCACGTACATCAATTTCTACAGTTTTAtctt                                                                                   <  2:958361/141‑1 (MQ=255)
                                                    gACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTAtctt                                                                                   <  1:395600/141‑1 (MQ=255)
                                                             ttAAGTGACCGCCTTTCGATCCTGTTGCAAGTTTAAGCTCTGGTTTTAAAAGTTCAACATCACGATCATGTGTAAGCTCTCTTGCTATTACTTCGCCTTCATCTCGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGt                                                                          <  2:388745/141‑1 (MQ=255)
                                                              tAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTa                                                                         <  1:155331/141‑1 (MQ=255)
                                                                aGTGACCCCCTTTAGAGACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTaaa                                                                       <  1:488091/141‑1 (MQ=255)
                                                                  tcagcaccTTTAGATACTGTTGCAATTTTAAGTTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAAtt                                                                     <  2:29331/137‑1 (MQ=255)
                                                                  tGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAAtt                                                                     >  1:99008/1‑141 (MQ=255)
                                                                  tGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAAtt                                                                     <  2:463336/141‑1 (MQ=255)
                                                                  tGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAAtt                                                                     <  1:279245/141‑1 (MQ=255)
                                                                   gACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAAttt                                                                    >  2:435511/1‑141 (MQ=255)
                                                                        ccTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAAt                                                               >  1:395686/1‑141 (MQ=255)
                                                                         cTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATg                                                              <  2:161435/141‑1 (MQ=255)
                                                                         cTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTCTTATCTTCTTCAGAGTAAATTTTCAATg                                                              >  2:241074/1‑141 (MQ=255)
                                                                          tttAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGc                                                             <  1:535453/141‑1 (MQ=255)
                                                                          tttAGATACTGTTGCAATTTTAAGCTCTGGCTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGc                                                             <  1:514225/141‑1 (MQ=255)
                                                                           ttAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCt                                                            <  2:35153/141‑1 (MQ=255)
                                                                           ttAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCt                                                            >  1:519280/1‑141 (MQ=255)
                                                                           ttAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGACTTCATCACGTACATCAATTGCTCAAGTTTTATCTTCTTCCGCGAAAATTTTCACTGCt                                                            >  1:426297/1‑141 (MQ=255)
                                                                             ataTACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCACTTCCTCAAGTATCCTCTCCATCCGACCAAATCTTCAAACCTaa                                                          <  2:481231/139‑1 (MQ=255)
                                                                             aGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAACTTTTccagtctaa                                                          >  2:813749/1‑133 (MQ=255)
                                                                               gtACTGTTGCAATTTTAGGCTCTGGGTTTAAGATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGCGTAAATTTTCAATGCTAAtt                                                        <  2:805796/140‑1 (MQ=255)
                                                                               aTACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTTTCTTCTTCAGAGTAAATTTTCAATGCTAAtt                                                        <  1:986510/141‑1 (MQ=255)
                                                                               aTACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAAtt                                                        <  2:565951/141‑1 (MQ=255)
                                                                               aTACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAAtt                                                        <  2:197971/141‑1 (MQ=255)
                                                                               aTACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAAtt                                                        >  1:119333/1‑141 (MQ=255)
                                                                               aTACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAAtt                                                        <  2:503663/141‑1 (MQ=255)
                                                                               aTACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAAtt                                                        <  2:805765/141‑1 (MQ=255)
                                                                               aTACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAAGGCGAAtt                                                        >  1:126860/1‑141 (MQ=255)
                                                                               aTACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTAATGCCGTGTAAATTTTCAATGCTAGtt                                                        >  1:923349/1‑141 (MQ=255)
                                                                                  cggTTGCTGTTTTAGTCTCTTGGTTTAACATTTCAACAACTCTTTCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTGATCCCGTACATTAATTTCTAATGTTTTATCTTCTTCAGAGGAAATTTTCACTGCTAATTGtt                                                     <  2:245210/139‑1 (MQ=255)
                                                                                  cTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGtt                                                     <  1:848519/141‑1 (MQ=255)
                                                                                  cTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGtt                                                     <  2:484066/141‑1 (MQ=255)
                                                                                      tGCAATTTTAAGCTCTGGGTTTAAAATTTCACCATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATg                                                <  1:855969/141‑1 (MQ=255)
                                                                                      tGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTACTTGTTTAAt                                                 >  2:252538/1‑141 (MQ=255)
                                                                                      tGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAAt                                                 >  2:899902/1‑141 (MQ=255)
                                                                                       tcAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATg                                                <  2:645506/140‑1 (MQ=255)
                                                                                       gCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATg                                                <  2:468788/141‑1 (MQ=255)
                                                                                       gCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATg                                                <  1:614917/141‑1 (MQ=255)
                                                                                        cAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATGt                                               <  1:899902/141‑1 (MQ=255)
                                                                                         aaTTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATGtt                                              >  1:380488/1‑141 (MQ=255)
                                                                                         aaTTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACAGCAATTTCTAAAGTTTTATCTTCTTCACAGTAAATTTTCAATGCTAATCGTTTTATgct                                              >  1:300581/1‑139 (MQ=255)
                                                                                          aTTTTAAGCTCTGGGTTTAAAATTTCAACCTCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATACTAATTGTTTCATGttt                                             >  1:947143/1‑140 (MQ=255)
                                                                                              tAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATGTTCataa                                         >  1:302204/1‑141 (MQ=255)
                                                                                                aGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTTTTTAATGTTCataata                                       >  2:79431/1‑141 (MQ=255)
                                                                                                aGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATGTTCataata                                       <  1:294331/141‑1 (MQ=255)
                                                                                                aGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATGCTCatatta                                       >  2:861376/1‑141 (MQ=255)
                                                                                                 gCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATGTTCAtaataa                                      <  2:629243/141‑1 (MQ=255)
                                                                                                 gCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATGTTCAtaataa                                      >  1:44272/1‑141 (MQ=255)
                                                                                                 gCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATGTTCAtaataa                                      <  1:344801/141‑1 (MQ=255)
                                                                                                  ctctGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATGTTCATaataat                                     <  2:688004/141‑1 (MQ=255)
                                                                                                  ctctGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATGTTCATaataat                                     <  2:66044/141‑1 (MQ=255)
                                                                                                  ctctGGGTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATGTTCATaataat                                     <  1:435511/141‑1 (MQ=255)
                                                                                                      gggTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATGTTCATAATAATTGTa                                 >  1:959088/1‑141 (MQ=255)
                                                                                                       ggTTTAAAATTTCAACATTACTATCATGTGTAAGCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATTCTAATTGTTTAATGTTCATAATAATTGTAg                                <  2:233525/141‑1 (MQ=255)
                                                                                                       ggTTTAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATGTTCATAATAATTGTAg                                <  1:169044/141‑1 (MQ=255)
                                                                                                          ttAAAATTTCAACATCACTATCATGTTTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATGTTCATAATAATTGTAGaaa                             <  2:694833/141‑1 (MQ=255)
                                                                                                          ttAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTTCTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATGTTCATAATAATTGTAGaaa                             <  2:985765/141‑1 (MQ=255)
                                                                                                          ttAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATGTTCATAATAATTGTAGaaa                             <  1:70328/141‑1 (MQ=255)
                                                                                                           tAAAATTTCAACATCACTATCATGTGTAATCTGGCTTGCGGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCCGAGTAAATTTTCAATGCTAATTGTTTAATGTTCATAATAATTGTACAAAc                            >  2:371835/1‑141 (MQ=255)
                                                                                                           tAAAATTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATGTTCATAATAATTGTAGAAAc                            <  2:365964/141‑1 (MQ=255)
                                                                                                            aaaaTTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATGTTCATAATAATTGTAGAAACa                           >  1:564713/1‑141 (MQ=255)
                                                                                                            aaaaTTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTCTTGAGTAAATTTTCAATGCTAGTTGTTTAATGTTCATAATAATTGTAGAAAcg                           >  1:28237/1‑140 (MQ=255)
                                                                                                             aaaTTTCAACATCACTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATGTTCATAATAATTGTAGAAACAt                          >  2:392101/1‑141 (MQ=255)
                                                                                                               ttttCTACATCACTATCACGTGTAATCTCGCTGGCTGTTACTTCGCCTTCATCACGTACATCAAGTTCGAAAGTTCTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATGTTCATGATAATTGTAGAAACATCt                        <  2:846121/140‑1 (MQ=255)
                                                                                                                           ctgtCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATGTTCATAATAATTGTAGAAACATCTTCAACTACATTg            <  2:236439/138‑1 (MQ=255)
                                                                                                                           cTATCATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATGTTCATAATAATTGTAGAAACATCTTCAACTACATTg            <  2:77400/141‑1 (MQ=255)
                                                                                                                             aTCATGTGTAATCTCGCATGGTGTTACTTCGCCATCATCACGTACATCAATTTCTAAGGTTTTATCTTCTTCTGAGTAAATTTTGACTGCTAATTGTTTTATATTTGTAGTAATTATAGAATAATCTTTAATTAAATtctc          >  2:459088/1‑141 (MQ=255)
                                                                                                                               cATGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATGTTCATAATAATTGTAGAAACATCTTCAACTACATTGTCTa        >  1:409006/1‑141 (MQ=255)
                                                                                                                                aTGTGTAATCTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATGTTCATAATAATTGTAGAAACATCTTCAACTACATTGTCtcc       >  1:462742/1‑139 (MQ=255)
                                                                                                                                         |                                                                                                                                        
CTAGTATTATTTTGTTCTGCTAATGCGTAACCTCTACCCTTGTTAGCAACTAGACGAATTTTTAAGTGACCACCTTTAGATACTGTTGCAATTTTAAGCTCTGGGTTTAAAATTTCAACATCACTATCATGTGTAATGTCGCTTGCTGTTACTTCGCCTTCATCACGTACATCAATTTCTAAAGTTTTATCTTCTTCAGAGTAAATTTTCAATGCTAATTGTTTAATGTTCATAATAATTGTAGAAACATCTTCAACTACATTGTCTACTGCTG  >  CP000730/2358448‑2358721

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: