Predicted mutation
evidence seq id position mutation annotation gene description
RA CP000730 584,121 G→T intergenic (+205/‑67) rplA → / → rplJ ribosomal protein L1/ribosomal protein L10

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP000730584,1210GT100.0% 230.8 / NA 77intergenic (+205/‑67)rplA/rplJribosomal protein L1/ribosomal protein L10
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (50/27);  total (50/27)

TAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCGTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTACTATCAAATTCAGTT  >  CP000730/583985‑584256
                                                                                                                                        |                                                                                                                                       
tAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGAAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAACTAATTTTTGTCTTggg                                                                                                                                     >  2:898634/1‑141 (MQ=255)
tAATTTCCAAGGTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCATTggg                                                                                                                                     >  2:871674/1‑141 (MQ=255)
 aaTTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGt                                                                                                                                    >  1:577919/1‑141 (MQ=255)
  aTTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTa                                                                                                                                   >  1:785279/1‑141 (MQ=255)
   tttCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGAACGTAGGAGTTATTTATAACTTAAAATTTATCATGCCGAGGCTAAAATTGACTTGCACGTGATGATCTATGGTCTTTAAAGCCATTTTTGTCTTTGGTAg                                                                                                                                  >  2:520001/1‑141 (MQ=255)
     tCCAAGTTATATTACTTATTGTTATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGaa                                                                                                                                <  1:597799/141‑1 (MQ=255)
     tCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTCGGGGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGaa                                                                                                                                <  1:819134/141‑1 (MQ=255)
     tCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGaa                                                                                                                                <  1:240885/141‑1 (MQ=255)
     tCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGaa                                                                                                                                <  1:252280/141‑1 (MQ=255)
     tCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGaa                                                                                                                                <  1:662312/141‑1 (MQ=255)
      ccAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGaaa                                                                                                                               >  2:475867/1‑141 (MQ=255)
      ccAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTCTGCCTTGGGTAGaaa                                                                                                                               >  1:204735/1‑141 (MQ=255)
       cAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAg                                                                                                                              >  2:614795/1‑141 (MQ=255)
         aGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTGGGGTAGAAAGTg                                                                                                                            >  1:379278/1‑141 (MQ=255)
             atatTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCttt                                                                                                                        >  1:934345/1‑141 (MQ=255)
             atatTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTAATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCttt                                                                                                                        >  1:776305/1‑141 (MQ=255)
              tatTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCtttt                                                                                                                       >  1:330580/1‑141 (MQ=255)
                           tattattTTACCAAAGCCAGTAGGAGTTATTTATAACTTAACATCTCTCCTGGCGAGGCTAAAATTGACTTGCACGTGCTTATCTATGTTGTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTa                                                                                                          <  2:648536/140‑1 (MQ=255)
                           gATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTa                                                                                                          <  1:186660/141‑1 (MQ=255)
                           gATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTa                                                                                                          <  1:452387/141‑1 (MQ=255)
                           gATTAGTTTACCTAAGACAGTAGGAGTTCTTTATAACTTAAACTTTACCCTGCCGCGGCTAAAATTGACTTGAACGTGAGGATCTAGGTTCTTTCAAGCACTTTTGGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTa                                                                                                          <  1:226806/141‑1 (MQ=255)
                            attattGTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTttaaaattaataa                                                                                                         <  2:8848/141‑11 (MQ=255)
                                 tttACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTaaaaaaa                                                                                                    >  2:59885/1‑141 (MQ=255)
                                 tttACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTaaaaaaa                                                                                                    >  2:499021/1‑141 (MQ=255)
                                     ccTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCAc                                                                                                >  1:572516/1‑141 (MQ=255)
                                       tAAGACAGTTGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCAcaa                                                                                              <  2:464043/141‑3 (MQ=255)
                                       tAAGACAATAGGAGATATATAAAACAAAAAATAAAACCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCATTTTTTGCCTTGGGTAGAAAGTTCTTTTTTAAAAAAAAAAAAAAAAAGCACCa                                                                                              <  2:998438/141‑1 (MQ=255)
                                            cAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGAACCAAAAAt                                                                                         >  2:806136/1‑141 (MQ=255)
                                             aGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAAtt                                                                                        >  1:200232/1‑141 (MQ=255)
                                             aGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAAtt                                                                                        <  2:785279/141‑1 (MQ=255)
                                                aGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTaa                                                                                     >  2:173450/1‑141 (MQ=255)
                                                aGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAAGTTaa                                                                                     >  2:271635/1‑141 (MQ=255)
                                                aGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAATGCTTTTTTTATTAATTTTCAAACACGCACCAAAAATGTaa                                                                                     >  2:629056/1‑141 (MQ=255)
                                                  gAGTTATTTGTGACTTAAAAGGGATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGGTCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAAt                                                                                   >  2:752657/1‑141 (MQ=255)
                                                  gAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAAt                                                                                   >  2:733807/1‑141 (MQ=255)
                                                  gAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAAt                                                                                   >  2:363997/1‑141 (MQ=255)
                                                   aGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAACATTGACTTGAACGTGATGATCTATGGTCTTTCAAGCAATTTTTTTTTTTGTATGAAAGTGATTTTTGTATTATCTTTAGATAATGCAGCaacgagttatatg                                                                                  >  2:269374/1‑130 (MQ=255)
                                                          tataACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGgtgt                                                                           >  2:814133/1‑141 (MQ=255)
                                                          tataACTTAAAATTTATCATGGCGAGGCTAAAATTGACTTGAACGTGATGAGCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAACGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGgtgt                                                                           >  2:706875/1‑141 (MQ=255)
                                                                 tAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATg                                                                    <  2:330580/141‑1 (MQ=255)
                                                                    aaTTTATCCTTCCGAGGCTAAAATTGACTAGAACGTGATGATCTATGATCGTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCt                                                                 >  2:731751/1‑141 (MQ=255)
                                                                    aaTTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTTATTTTAAAAAAAGCACCAAAAATTTAAATTGAGGTGTATGAATGTCt                                                                 >  2:128665/1‑141 (MQ=255)
                                                                     aTTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCtt                                                                >  2:736343/1‑140 (MQ=255)
                                                                     aTTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTg                                                                <  1:614795/141‑1 (MQ=255)
                                                                        tATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTa                                                             <  2:490066/141‑1 (MQ=255)
                                                                         aTCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCCCCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTAt                                                            >  1:926696/1‑141 (MQ=255)
                                                                         aTCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCGGAATGTATGCTAt                                                            >  1:831208/1‑141 (MQ=255)
                                                                         aTCCTGCCGAGGCTAAAATAGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTAt                                                            >  1:593973/1‑141 (MQ=255)
                                                                          tCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATc                                                           >  1:855858/1‑141 (MQ=255)
                                                                                cGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTATAGAAAGCACCAAAACCTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGaa                                                     >  1:875227/1‑141 (MQ=255)
                                                                                cGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGaa                                                     >  2:87574/1‑141 (MQ=255)
                                                                                 gAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAg                                                    <  2:156303/141‑1 (MQ=255)
                                                                                   ggCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCt                                                  <  2:917407/141‑1 (MQ=255)
                                                                                   ggCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCt                                                  <  1:190689/141‑1 (MQ=255)
                                                                                   ggCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAAGGTCTGCTATCATTGAAGCt                                                  >  1:296460/1‑141 (MQ=255)
                                                                                   ggCTAAAATTGACTTGAACGTGAGGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCt                                                  <  2:667022/141‑1 (MQ=255)
                                                                                     cTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGCAGCTaa                                                >  2:503503/1‑141 (MQ=255)
                                                                                     cTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTaa                                                >  1:347398/1‑141 (MQ=255)
                                                                                     cTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTaa                                                >  1:175885/1‑141 (MQ=255)
                                                                                     cTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGAGTCTGAATGTCTGCTATCATTGAAGCTaa                                                >  2:788737/1‑141 (MQ=255)
                                                                                       aaaaTTTACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTaaaa                                              <  2:265828/141‑1 (MQ=255)
                                                                                              aattGAATGTGATGATCTATGATCTTTCAACGACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACt                                       <  2:72588/139‑1 (MQ=255)
                                                                                               cTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTa                                      >  1:407418/1‑141 (MQ=255)
                                                                                                          tgatctatgatctTTCAAGCACTTTTTTTTTTTTTTTTAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCAGCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAAt                           >  2:760913/1‑141 (MQ=255)
                                                                                                          tgatctatgatctTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAAt                           >  2:41491/1‑141 (MQ=255)
                                                                                                                ttggtctTTCAAGCACTTTTTGCCTTGGTTAGGAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGa                     <  2:297101/137‑1 (MQ=255)
                                                                                                                     ctTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTAc                >  2:150234/1‑141 (MQ=255)
                                                                                                                          aaGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTACTATCa           <  1:806136/141‑1 (MQ=255)
                                                                                                                          aaGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTACTATCa           >  2:409343/1‑141 (MQ=255)
                                                                                                                            gcgcTTTTTGCGTTGGGTAGATAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTACTATCaaa         <  1:332538/138‑1 (MQ=255)
                                                                                                                            gCACTTTTTTCTTTTTGTAGAAAGTGCATTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGACTGCTATCATTGAAGCCAAAAAACTACTAGTTGATGAAATTGCTGAGGTGTAATCaaa         >  2:363124/1‑141 (MQ=255)
                                                                                                                            gCACTTTATGTCTTGCGTCGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAACTTAAATGGAGGTGTCTGAATGTCCGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTACTATCaaa         <  1:1755/141‑1 (MQ=255)
                                                                                                                            acattttttACCTTGAGTAGAAAGTGCTTTTTTAAAAAAATAAAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTACTATCaaa         <  2:873404/137‑1 (MQ=255)
                                                                                                                                 ttttGCCTTGGGTAGAAAGTGCTTTTTTTTTTTTTTTTTAAAAAAGCACCAACAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAACAATCAACTAGTTCATGAAATTTCTGAGGTACTCTCAAATTCat    >  2:54271/1‑140 (MQ=255)
                                                                                                                                  tttGCCTTGGGTAGAAAGTGCTTTTTTTTTTATTTTTAAAAAAAGCACCAAAAATTTAAATTGAGGTGTCTGAATGTCTGCTATCATTGTAGCTCAAAAACAACTAGTTGATGAAATTGCTGAGGTAGTATCAAATTCatt   >  2:837348/1‑139 (MQ=255)
                                                                                                                                  tttGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTACTATCAAATTCAGt   >  1:962498/1‑141 (MQ=255)
                                                                                                                                   ttGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTACTATCAGATTCAGtt  >  1:324437/1‑141 (MQ=255)
                                                                                                                                        |                                                                                                                                       
TAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCGTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTACTATCAAATTCAGTT  >  CP000730/583985‑584256

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: