Predicted mutation
evidence seq id position mutation annotation gene description
RA CP000730 1,063,849 C→T D214N (GAC→AAC)  brpA ← LytR family transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007301,063,8490CT98.5% 215.2 / NA 68D214N (GAC→AAC) brpALytR family transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base T (31/36);  total (31/37)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CAGAGTTAGTTAAATTATGCTTTGCATTTTTACCTACAATTTGAATCACGTTATCAAGTTTATCAATAGAATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTCTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCTTACCAGTATCATCTGTGTTAGGTTCATTTAAGTCGTATGGCACATCATAGTATATGC  >  CP000730/1063711‑1063986
                                                                                                                                          |                                                                                                                                         
cAGAGTTAGTTAAATTATGCTTTGCATTTTTACCTACAATTTGAATCACGTTATCAAGTTTATCAATAGAATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAGGTTTg                                                                                                                                         >  1:124309/1‑141 (MQ=255)
 agagTTAGTTAAATTATGCTTTGCATTTTTACCTACAATTTGAATCACGTTATCAAGTTTATCAATAGAATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGa                                                                                                                                        >  2:613080/1‑141 (MQ=255)
   agttagttAAATTATGCTTTGCATTTTTACCTACAATTTGAATCACGTTATCAAGTTTATCAATAGAATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAAt                                                                                                                                      <  1:323915/141‑1 (MQ=255)
       agttaAATTATGCTTTGCATTTTTACCTACAATTTGAATCACGTTATCAAGTTTATCAATAGAATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGGTTTAAGTTGGAATCatg                                                                                                                                  >  1:269348/1‑141 (MQ=255)
        gttaAATTAAGCTTTGCATTTTTACCTACAAGTTGAATCACGTTATCAAGTTTATCACTTGAATAAAATTCTTGTGATTTTTGGATTAAAATCTTATTTAAATCAATTTGAAGTTGTCCACGTTTCAAGTTTGAATCatgt                                                                                                                                 >  2:268992/1‑140 (MQ=255)
         ttaAATTATGCTTTGCATTTTTACCTACAATTTGAATCACGTTATCAAGTTTATCAATAGAATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCatgat                                                                                                                                <  1:143085/141‑1 (MQ=255)
           aaaTTATGCTTTGCATTTTTACCTACAATTTGAATCACGTTATCAAGTTTATCAATAGAATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGt                                                                                                                              <  2:751653/141‑1 (MQ=255)
                  gCTTTGCATTGTTACCTACATTTTGAATCACGTTATCAAGTTTATCAATAGAATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTATTTc                                                                                                                       >  2:337375/1‑141 (MQ=255)
                       gCATTTTTACCTACAATTTGAATCACGTTATCAAGTTTATCAATAGAATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCa                                                                                                                  <  1:297761/141‑1 (MQ=255)
                            tttACCTACAATTTTAATCACGTTATCAAGTTTATCAACAGAAGCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGc                                                                                                             <  2:393439/141‑1 (MQ=255)
                             ttACCTACAATTTGAATCACGTTATCAAGTTTATCAATAGAATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCt                                                                                                            >  1:416828/1‑141 (MQ=255)
                               aCCTACAATTTGAATCACGTTATCAAGTTTATCAATAGAATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTaa                                                                                                          <  1:249072/141‑1 (MQ=255)
                               aCCTACAATTTGAATCACGTTATCAAGTTTATCAATAGAATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTaa                                                                                                          <  2:160155/141‑1 (MQ=255)
                                         tGAATCACGTTATCAAGTTTATCAATAGAATCAACTTCCTGTGCGTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCCAGTTCTAGCAACTGCTCAAGCCtcatca                                                                                                >  1:562581/1‑141 (MQ=255)
                                           aaTCACGTTATCAAGTTTATCAATAGAATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCAcc                                                                                              >  1:834594/1‑141 (MQ=255)
                                            accgcGTTATCAAGTTTATCAATAGAATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCa                                                                                             <  2:562581/137‑1 (MQ=255)
                                            aTCACGTTATCAAGTTTATCAATAGAATCAACTTCCTGTGCTTTTTGGAGTAAAATCTTAATTAATTGCATTCGCCGTTGTACACGTTTTTAGTTTGAATAGTGATGTCTAGTTCTAGTAACTGCTAAGGTTtcatcaacc                                                                                             >  1:446464/1‑138 (MQ=255)
                                            aTCACGTTATCAAGTTTATCAATAGAATCAACTTCCTGTGCTTTTTGGAATAACATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAGGCCTCATCACCa                                                                                             >  1:981660/1‑141 (MQ=255)
                                            aTCACGTTATCAAGTTTATCAATAGAATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCa                                                                                             >  1:910467/1‑141 (MQ=255)
                                            aTCACGTTATCAAGTTTATCAATAGAATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCa                                                                                             >  2:115840/1‑141 (MQ=255)
                                            aTCACGTTATCAAGTTTATCAATAGAATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCa                                                                                             >  1:956906/1‑141 (MQ=255)
                                            aTCACGTTATCAAGTTTATCAATAGAATCAAAATCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCAACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCa                                                                                             >  2:654581/1‑141 (MQ=255)
                                              cACGTTATCAAGTTTATCAATAGAATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCAtt                                                                                           <  2:906169/141‑1 (MQ=255)
                                                    aTCAAGTTTATCAATAGAATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAAttt                                                                                     >  1:621378/1‑141 (MQ=255)
                                                    aTCAAGTTTATCAATAGAATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCCCATCACCATTTACttt                                                                                     >  2:663032/1‑141 (MQ=255)
                                                        aGTTTATCAATAGAATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTgg                                                                                 <  2:327461/141‑1 (MQ=255)
                                                            tATCAATAGAATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTAcc                                                                             <  1:859605/141‑1 (MQ=255)
                                                            tATCAATAGAAGCAACTTCCTGGGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTAcc                                                                             <  1:744706/141‑1 (MQ=255)
                                                              tCAATAGGATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCt                                                                           <  2:708568/141‑1 (MQ=255)
                                                              tCAATAGAATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCt                                                                           <  2:877545/141‑1 (MQ=255)
                                                              tCAATAGAATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGAAGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGGAACTGCTAAAGCCTCATCACCATTTTATTTTTGGTACCCt                                                                           <  2:286816/141‑1 (MQ=255)
                                                              tCAATAGAATCAACCTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCCCGTATAAAGTCTAATACTTATTTATTAGGTCTAGCAACTTCTGAAGCCTCATCACCATTTCATATTTGGGACCCt                                                                           <  2:209374/141‑1 (MQ=255)
                                                                   aGAATCAACTTCCTGTGCTTTTTGGAATAAATTCTTAATTAATTCCATTTGACGTTGTATTTGTTTTATGTTTGAATCATGATGTCTAGTTCTGGCATCTGCTAATGTGTTTTCATATTTTTTTTTTTGGTGCTCtttttt                                                                      >  2:102130/1‑141 (MQ=255)
                                                                   aGAATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCtttttt                                                                      >  2:970085/1‑141 (MQ=255)
                                                                          aCTTCCTGTGCTTTTTTTTTTTTTTTCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTATTTTTTGTTACCCTTttttaatttta                                                               >  2:755602/1‑141 (MQ=255)
                                                                           cTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGGTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTttttaattttaa                                                              <  1:448527/141‑1 (MQ=255)
                                                                            ttCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTtttaattttaat                                                             >  2:496837/1‑141 (MQ=255)
                                                                             tCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATc                                                            >  1:781947/1‑141 (MQ=255)
                                                                              ccTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCt                                                           >  1:619788/1‑141 (MQ=255)
                                                                               cTGTGCTTTTTGGAATAAACTCTTAAGTAATTCCATTTGACGTTGTCCACTTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAATGCCTCCTCACCATTTATTTTTTGGTACCCTTTTTTTATTTTAATCtt                                                          <  2:160167/141‑1 (MQ=255)
                                                                               cTGTGCTTTTTGGAATAAAATCTTCATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCtt                                                          <  2:160151/141‑1 (MQ=255)
                                                                                 gtgCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAGGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTtttttatttttatttttat                                                        >  2:589331/1‑140 (MQ=255)
                                                                                    cTTTTTGGACTAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCTTACCAg                                                     <  2:690388/141‑1 (MQ=255)
                                                                                    cTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCTTACCAg                                                     <  2:233886/141‑1 (MQ=255)
                                                                                     tttttGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTACTCTTACCTGt                                                    <  2:834594/141‑1 (MQ=255)
                                                                                     tttttGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCTTACCAGt                                                    <  1:38854/141‑1 (MQ=255)
                                                                                       tttGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCTTACCAGTat                                                  <  1:878864/141‑1 (MQ=255)
                                                                                          ggAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCCCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCTTACCAGTctcat                                               >  2:586003/1‑141 (MQ=255)
                                                                                            aaTAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCTTACCAGTATCATCt                                             >  2:905498/1‑141 (MQ=255)
                                                                                            aaTAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCTTACCAGTATCATCt                                             <  1:613080/141‑1 (MQ=255)
                                                                                            aaTAAAATCTTAATAAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCTTACTAGTTTCATCt                                             >  2:673805/1‑141 (MQ=255)
                                                                                              tAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCTTACCAGTATCATCtgt                                           <  1:990686/141‑1 (MQ=255)
                                                                                              tAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCTTACCAGTATCATCtgt                                           <  1:446231/141‑1 (MQ=255)
                                                                                              tAAAATCTTAATTAATTCCATTTGACGTTGCCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCTTACCAGTATCATCtgt                                           <  1:263802/141‑1 (MQ=255)
                                                                                              tAAAACTTTAATTAATTCCATGTGACGTTGTCCACGGGTTATGTTTGAAGCATGATGTCTAGTACTAGCAACTGCTAAAGCCTCACCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCTTACCAGTATCATCtgt                                           <  1:622961/141‑1 (MQ=255)
                                                                                                         ttaattCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCTTACCAGTATCATCTGTGTTAGGTTCAt                                <  2:18043/141‑1 (MQ=255)
                                                                                                         ttaattCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCTTACCAGTATCATCTGTGTTAGGTTCAt                                <  2:292036/141‑1 (MQ=255)
                                                                                                            attCCATTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCTTACCAGTATCATCTGTGTTAGGTTCATTTa                             <  2:981660/141‑1 (MQ=255)
                                                                                                                 aTTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCTTACCGGTATCATCTGTGTTAGGTTCATTTAAGTCg                        >  1:766007/1‑141 (MQ=255)
                                                                                                                 aTTTGACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCTTACCAGTATCATCTTTGTTAGGTGCTTTTagttct                        >  1:441818/1‑136 (MQ=255)
                                                                                                                    tGACGTTGTCCACGTGGTAAGTTTGAATCATGATGTCTAGTTCTAGCAACAGCTTAAGCCTCATCACCATGTAATCTGTGGTACCCTTTTTTAATTTTAATCTTACCAGTATCATCTGTGTTAGGTTCATTTAAGTCGTAt                     >  1:197011/1‑141 (MQ=255)
                                                                                                                     gACGTTGTCCACTTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCTTACCAGTATCATCTGTGTTAGGTTCATTTAAGTCGTATg                    <  2:558768/141‑1 (MQ=255)
                                                                                                                     gACGTTGTCCACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCTTACCAGTATCATCTGTGTTAGGTTCATTTAAGTCGTATg                    <  2:188183/141‑1 (MQ=255)
                                                                                                                             ccACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCTTACCAGTATCATCTGTGTTAGGTTCATTTAAGTCGTATGGCAcatca            >  2:985064/1‑141 (MQ=255)
                                                                                                                              cACGTTTTAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCTTACCAGTATCATCTGAGTTAGGTTCATTTAAGTCGTATGGcacacaca           >  2:765494/1‑137 (MQ=255)
                                                                                                                                     tAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCTTACCAGTATCATCTGTGTTAGGTTCATTTAAGTCGTATGGCACATCATAGTatat    <  1:613034/141‑1 (MQ=255)
                                                                                                                                     tAAGTTTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCTTACCAGTATCATCTGTGTTAGGTTCATTTAAGTCGTATGGCACATCATAGTatat    <  1:114841/141‑1 (MQ=255)
                                                                                                                                       aGTTTGAATCATGATGTCTAGTTCGAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCTTACCAGTATCATCTGTGTTAGGTTCATTTAAGTCGTATGGCACATCATAGTATATGc  <  1:403790/141‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                         
CAGAGTTAGTTAAATTATGCTTTGCATTTTTACCTACAATTTGAATCACGTTATCAAGTTTATCAATAGAATCAACTTCCTGTGCTTTTTGGAATAAAATCTTAATTAATTCCATTTGACGTTGTCCACGTTTTAAGTCTGAATCATGATGTCTAGTTCTAGCAACTGCTAAAGCCTCATCACCATTTAATTTTTGGTACCCTTTTTTAATTTTAATCTTACCAGTATCATCTGTGTTAGGTTCATTTAAGTCGTATGGCACATCATAGTATATGC  >  CP000730/1063711‑1063986

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: