New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 = 800928106 (0.840)4 (0.030) 4/282 6.8 4.1% intergenic (+62/‑289) hisC1/USA300HOU_0748 histidinol‑phosphate transaminase/hypothetical protein
?CP000730 801948 = 85 (0.710)intergenic (+189/+435) USA300HOU_0748/dgkA1 hypothetical protein/possible diacylglycerol kinase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 106 total aligned reads displayed.

CAACTGGTGTTAGAATTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGA  >  CP000730/800784‑801076
                                                                                                                                                |                                                                                                                                                    
cAACTGGTGTTAGAATTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGc                                                                                                                                                  >  2:985613/1‑149 (MQ=255)
cAACTGGTGTTAGAATTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGc                                                                                                                                                  >  2:1115356/1‑149 (MQ=255)
cAACTGGTGTTAGAATTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGc                                                                                                                                                  >  1:218346/1‑149 (MQ=255)
cAACTGGTGTTAGAATTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGc                                                                                                                                                  >  1:153676/1‑149 (MQ=255)
cAACTGGTGTTAGAATTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGc                                                                                                                                                  >  1:1255942/1‑149 (MQ=255)
  aCTGGTGTTAGAATTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCAt                                                                                                                                                <  2:269666/149‑1 (MQ=255)
    tGGTGTTAGAATTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTg                                                                                                                                              <  1:808216/149‑1 (MQ=255)
       tgtTAGAATTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCt                                                                                                                                           <  2:462361/149‑1 (MQ=255)
       tgtTAGAATTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCt                                                                                                                                           <  2:1259921/149‑1 (MQ=255)
        gtTAGAATTACAATTGGTTTTCAAGACCAAAATGCTAACTTGTTAGATGCTTTATCAAACTTTAAACAAGACTTTTAAGTGGGGACGTGGACAGAAAGGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTg                                                                                                                                          <  1:1326533/149‑1 (MQ=21)
          tAGAATTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTa                                                                                                                                        >  1:728116/1‑149 (MQ=255)
             aaTTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGaa                                                                                                                                     <  2:628739/149‑1 (MQ=255)
             aaTTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGaa                                                                                                                                     <  1:1250647/149‑1 (MQ=255)
             aaTTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGaa                                                                                                                                     <  1:161352/149‑1 (MQ=255)
             aaTTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGaa                                                                                                                                     <  1:1242437/149‑1 (MQ=255)
                 aCAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATAATTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTTTCGTTAGAAAttt                                                                                                                                 >  2:1284429/1‑148 (MQ=255)
                    aTTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGa                                                                                                                              <  2:925069/149‑1 (MQ=255)
                     ttGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCTCCCCGACTTGCATTGTCTGTATGAACTgggga                                                                                                                             >  1:146416/1‑147 (MQ=37)
                     ttGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGaa                                                                                                                             >  2:480728/1‑149 (MQ=255)
                      tGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAt                                                                                                                            <  1:629212/149‑1 (MQ=255)
                              aaGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTtc                                                                                                                    >  2:1190376/1‑149 (MQ=255)
                               aGAACAGATTGGTAAAATGCAAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCGACTTCCATTGTCTGTAGAAATTGGGAATCAACTTtcc                                                                                                                   >  2:1302817/1‑148 (MQ=21)
                               aGAACAAAATGATAAAATGTTAGAAGTTTTGTCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCCCCCCAACTTGCATTGTCTGTAGGAATTGGGacgccgattact                                                                                                                   >  1:326557/1‑138 (MQ=25)
                               aGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATTCTTGCGCAAAATTTATTGCGTCGTCCTTCCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTtct                                                                                                                   <  2:629315/149‑1 (MQ=25)
                               aGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTtct                                                                                                                   >  1:1085334/1‑149 (MQ=255)
                               aGAACAAAATGATAAAATGTTAGAAGTGTTATCAAACTTTAAATACGAATAGTAAGTAGGGAGTGGGACAGAAATGATACTGTCGCAAAATTTGTTGCGTCGTCCCACCCCAACTTCCATTGTCTGTGGAAATTGGGAACCCAATTtcc                                                                                                                   >  2:29950/1‑148 (MQ=21)
                                         gATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTggg                                                                                                         >  1:250202/1‑149 (MQ=255)
                                           tAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGc                                                                                                       <  2:363235/149‑1 (MQ=255)
                                           tAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCGGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGc                                                                                                       <  1:1331343/149‑1 (MQ=255)
                                               aTGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCccg                                                                                                   >  2:673288/1‑149 (MQ=255)
                                               aTGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCccg                                                                                                   >  1:754542/1‑149 (MQ=255)
                                                  ttAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCCATTTCCCTTGGTTGGGGCCccgccg                                                                                                >  2:72112/1‑149 (MQ=255)
                                                   tAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCgg                                                                                               >  2:246113/1‑149 (MQ=255)
                                                      aaGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCaa                                                                                            >  1:475369/1‑149 (MQ=255)
                                                       aGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAg                                                                                           >  1:13774/1‑149 (MQ=255)
                                                            tATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGa                                                                                      <  1:483397/149‑1 (MQ=255)
                                                              tCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCCCTTTGTTGGGGACCCGCCGGCGAGGTTGagt                                                                                    >  1:426620/1‑147 (MQ=255)
                                                              tCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCATTTTGTGAGGTCCCTGCCGGCACGGTTGACt                                                                                    >  1:630490/1‑149 (MQ=18)
                                                              tCAAACTTTAAATACGAATAGTAAGTGGGGAGTGCGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCAACACAATCTAGTGCTTTCAGTAGAAATTGGTAATCCAATTTCTCTTTGTTGGCGCCCCGCCGGCAAGGTTGACt                                                                                    <  2:611425/149‑1 (MQ=18)
                                                              acAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTCTTTAGTAGTACCACCCCAGTTTGTATTTTCTGCAGACATTGGGAATCCAATTTCTCTTTGTTGCGGCCCCGCCGGCACGGTTGACt                                                                                    <  2:913/148‑1 (MQ=18)
                                                               cAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTa                                                                                   >  1:548289/1‑149 (MQ=255)
                                                                       aaaTACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGaa                                                                           <  2:275779/149‑1 (MQ=255)
                                                                       aaaTACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGaa                                                                           >  2:225959/1‑149 (MQ=255)
                                                                            cGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAg                                                                      <  1:1075513/149‑1 (MQ=255)
                                                                            cGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGAATaaaaaagaaaaaag                                                                      <  2:499015/149‑1 (MQ=255)
                                                                                tAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTg                                                                  >  2:687024/1‑149 (MQ=255)
                                                                                 aGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGt                                                                 <  1:1295127/149‑1 (MQ=255)
                                                                                      gTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACaa                                                            <  1:1115356/149‑1 (MQ=255)
                                                                                       tGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAg                                                           >  1:408252/1‑149 (MQ=40)
                                                                                       tGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGGTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAg                                                           >  1:1255714/1‑149 (MQ=255)
                                                                                        ggggAGTGGGACAGAACTGCTACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAgc                                                          <  2:1301599/149‑1 (MQ=255)
                                                                                         gggAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCGATTTCTCTTTGTTGTGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTAGAAgcg                                                         >  1:160935/1‑149 (MQ=255)
                                                                                         gggAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAgcg                                                         >  1:1200107/1‑149 (MQ=39)
                                                                                         gggAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAgcg                                                         >  1:931310/1‑149 (MQ=38)
                                                                                         gggAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAgcg                                                         >  2:964000/1‑149 (MQ=39)
                                                                                         gggAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAgcg                                                         >  2:76019/1‑149 (MQ=39)
                                                                                           gAGTGGGACAGAAATGCTACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCa                                                       <  2:404401/149‑1 (MQ=38)
                                                                                           gAGCGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCAAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCa                                                       <  1:609732/149‑1 (MQ=255)
                                                                                                      aactgaatcttctgCAAAATTTATTGCTTCGTCCCCCCCCAAGTTGCAATGTCTGCAGAAAGTGGGAATCCAATTTCGCTTTGTTGGGGCCCCCCCGGTAAGGTTGAAAAAAAAAAAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAg                                            <  2:111342/136‑1 (MQ=19)
                                                                                                        aTGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTc                                          >  2:1170510/1‑149 (MQ=255)
                                                                                                        aTGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATCTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTCCAGTc                                          >  2:854442/1‑149 (MQ=255)
                                                                                                          gATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCaa                                        <  2:694141/149‑1 (MQ=40)
                                                                                                          aaTACTTTCGCAAAATTTATCTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCaa                                        <  2:391956/148‑1 (MQ=255)
                                                                                                             aCTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAacta                                     >  1:110936/1‑149 (MQ=38)
                                                                                                             aCTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTAGTTTAGTCAgctt                                     >  2:34858/1‑148 (MQ=255)
                                                                                                               tttCGCAAAATTTATTTCGTCGTCCCCCCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGAGCACCGGCGGCAGGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCCGTCAactact                                   >  1:639283/1‑149 (MQ=11)
                                                                                                               tttCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAactact                                   >  2:603859/1‑149 (MQ=38)
                                                                                                               tttCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAactact                                   >  1:701380/1‑149 (MQ=37)
                                                                                                                ttCGCAAAATTTATTTCGTCGTCCCACTCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTg                                  <  1:1229943/149‑1 (MQ=25)
                                                                                                                ttCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTg                                  >  1:439186/1‑149 (MQ=35)
                                                                                                                ttCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTg                                  <  1:596734/149‑1 (MQ=37)
                                                                                                                ttCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTg                                  <  2:1315407/149‑1 (MQ=35)
                                                                                                                 tCGCAAAGTTTATTTCGTCGTCCCACCCCAACGTGCATGGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACAAGAAAAAAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGc                                 <  2:1047059/149‑1 (MQ=11)
                                                                                                                 tCGCAAAATTTATTTCGTCGCCCCACCCCAACTTGCATTGTCTGTATAAATTGGGCATCCAATTTCGCTTTGTTGGGTCTCCGCCTTCAAGTTTTACAAGAAATGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACCACTGc                                 <  2:1016065/149‑1 (MQ=11)
                                                                                                                 tCGCAAAATTTATTTCGGCGGCCCAACCCAACTTGCATTGTCTGTAGAAATCGGGAGTCCAATTTCTCGTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGc                                 <  2:780752/149‑1 (MQ=11)
                                                                                                                  cGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGcc                                >  2:1328685/1‑149 (MQ=34)
                                                                                                                  cGCAAAATTTACTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGcc                                <  1:832783/149‑1 (MQ=25)
                                                                                                                  cGCAAAATTCATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGcc                                <  1:181854/149‑1 (MQ=25)
                                                                                                                   gCAAAATTTATTTCGGCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCa                               <  1:752385/149‑1 (MQ=21)
                                                                                                                    cAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCaa                              >  1:1345860/1‑149 (MQ=34)
                                                                                                                     aaaaTTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCACTTACACTTTGTCGGGGCCCCCGCGGCAAGGTTGACTAGCATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTCCTGCCAat                             >  1:1325569/1‑149 (MQ=11)
                                                                                                                     aaaaTTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAat                             >  1:415297/1‑149 (MQ=33)
                                                                                                                     aaaaTTTATTTCGTCGTCCCACCACAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACAAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAat                             <  2:34777/149‑1 (MQ=21)
                                                                                                                     aaaaTTCTTTGCGTCGTCCCAACACAACTTGCATTGTCTGTAGTAATTGGTAATCCAATGTCTCTTTGTTGGGGCCCCGCTGTCAATGTTGAAAAAAAATGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAat                             <  2:402642/149‑1 (MQ=11)
                                                                                                                          ttttttcttactcCCACCCAAACTTGCATTGTCTGTAGAAATTCGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCCGCAACGTCGACAAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGCCAACTACTGCCAATATAAc                        <  2:272702/138‑1 (MQ=11)
                                                                                                                          ttatttCGTCGTCCCACCCCAACTTGCATTGTCCGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAAc                        <  2:1313459/149‑1 (MQ=25)
                                                                                                                             tgtcgacgGCCGACTCCAACTAGCATGGTCTGTAGAAATTCGAAATCCAATTTCTCTTTGTTGGGGCCCCGCAGGAAAGGTTGACTAGAATTGAAAAAAGCATGTTACAAGCGCATTTTCGTTCAGTCAACTAATGCCAATATAACttt                     <  2:737018/147‑1 (MQ=11)
                                                                                                                                 gtcgtcCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTag                 >  1:1081317/1‑149 (MQ=35)
                                                                                                                                  tcgtcCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAAAATAACTATGTaga                >  2:1238251/1‑149 (MQ=21)
                                                                                                                                  tcgtcCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCACTTTCGTTCACTCAACTACTGCCAATATACCCTCGTagc                >  2:1082683/1‑148 (MQ=11)
                                                                                                                                   cgccccaatccAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGACCCGCCGGCAAGGTTGACTAAAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAAATACTGCCAATATAACTTTGTagag               <  1:137140/140‑1 (MQ=11)
                                                                                                                                    gtcCCACCCCAACTTGTATTGTCTGTAGAAATGGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACACGCGTCTTTTCGTTCAGTCAACTACTGCCAATATAATTGTGTAGAGc              <  2:454179/149‑1 (MQ=11)
                                                                                                                                    ctcCCCCCCCAACTTGCATTGTCTCTAGAAATTGGGAATCCACTTTCTCTTGGTGTTGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGc              <  1:841064/148‑1 (MQ=11)
                                                                                                                                      cccACCCCAACTTGCATTGTGTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCAt            <  2:1305609/149‑1 (MQ=25)
                                                                                                                                      cccACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCAt            <  1:333440/149‑1 (MQ=35)
                                                                                                                                             cAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACAt     <  1:1187111/149‑1 (MQ=38)
                                                                                                                                              aaCTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACAtt    >  1:728588/1‑149 (MQ=38)
                                                                                                                                               aCTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTg   >  1:1195036/1‑149 (MQ=39)
                                                                                                                                               aCTTGCATTGTCTGTAGAAATTGCGAATCCAATTTCTCTTTGTTGGAGCCCCGCCGGCAAGGTTGCCTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTg   >  2:242150/1‑149 (MQ=255)
                                                                                                                                                cTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGa  <  2:415297/149‑1 (MQ=39)
                                                                                                                                                |                                                                                                                                                    
CAACTGGTGTTAGAATTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGA  >  CP000730/800784‑801076

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.