| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 613948 = | 113 (1.190) | 9 (0.100) | 5/282 | 10.2 | 6.7% | coding (2260/2844 nt) | sdrC | Ser‑Asp rich fibrinogen/bone sialoprotein‑binding protein SdrC |
| ? | CP000730 | = 614091 | 140 (1.490) | coding (2403/2844 nt) | sdrC | Ser‑Asp rich fibrinogen/bone sialoprotein‑binding protein SdrC | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCACTGTCTGAGTCCGAATCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/614096‑613948‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctGTCTGAGTCCGAATCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATC < CP000730/614091‑613945 cCACTGTCTGAGTCCGAATCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCT < 2:122760/148‑1aCACTGTCTGAGTCTGAATCGCTATCTGAATCTGAATCGCTATGTGAGGCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCT < 2:192376/148‑1TCACTGTCTGAGTCCGAATCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCT < 2:923679/149‑1 TCTGAATCGCTATCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTCAATCGCTATCTGAGTCGGAATCGCattct > 1:36811/1‑136 tcccgtaTCTGAATCTGTATCTCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTC < 1:209092/134‑1 CGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCT < 1:1091983/40‑1 ctctttctCTGTCTGAATCTGAATCCCTGTCTGAGTCCGAATCGCTATCTGAATCTGAATCGCTCTCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTG < 1:864178/133‑1 gaGTCTGAATCTGCCTCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGACTCGCTATCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGGTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAG < 1:881979/139‑1 aggccGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGT < 1:1192012/136‑1 ATCTGAGTCGCTGTTCGACGCCGAACCGCTACCTGAGTCTGATTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTC < 1:481870/141‑1 agTCGCTGTCGGAGTCCGAATCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAAT < 1:795850/139‑1 aacccCTGTCTGAGTCCGAATCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCG < 2:76651/144‑1 AATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAAT < 1:795470/141‑1 ATCGCCGTCTGAGTCCGAATCGGTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATC < 1:914943/141‑1 CTGTCTGAGTCCGAATCGCTATCTGAATCTGAATCGCTTCCTTAGGCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATC < 2:633436/149‑1 CTGTCTAAGCCCATATCGCTATCAGAATCTGAATCGCTATCTGAATCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATC < 2:431204/149‑1 TCACTGTCTGAGTCCGAATCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/614096‑613948‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctGTCTGAGTCCGAATCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATC < CP000730/614091‑613945 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |