Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP000730	2,279,705	G→A	intergenic (+1373/+6659)	mtlD → / ← glmM	mannitol‑1‑phosphate 5‑dehydrogenase/phosphoglucosamine mutase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP000730	2,279,705	0	G	A	100.0%	271.4 / NA	84	intergenic (+1373/+6659)	mtlD/glmM	mannitol‑1‑phosphate 5‑dehydrogenase/phosphoglucosamine mutase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (51/33);  total (51/33)

TTGTGCCGTTATTAGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTGCTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAATTTGCT  >  CP000730/2279568‑2279839                                                                                                                                           |                                                                                                                                       ttGTGCCGTTATTAGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACtg                                                                                                                                     <  1:245123/141‑1 (MQ=255)        gTTATTAGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTc                                                                                                                              >  1:16617/1‑141 (MQ=255)        gTTATTAGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTc                                                                                                                              <  1:467765/141‑1 (MQ=255)               gTTGATTGTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGtt                                                                                                                       >  1:858408/1‑141 (MQ=255)               gTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTTTTGTTTCACCTGtt                                                                                                                       <  1:734487/141‑1 (MQ=255)               gTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCCCCTGtt                                                                                                                       >  1:675569/1‑141 (MQ=255)               gTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCAACTAAAAGC‑GGGGTTACTGTTGTTTCACCTGtt                                                                                                                       <  1:1013608/141‑1 (MQ=255)               gTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACGAGAATTGTTATTAGCTTCAACATTACCAGTTGCCCCATC‑CGTTGCTGTAGTTACTGTTGTTTCACCTGtt                                                                                                                       >  1:995190/1‑141 (MQ=255)               gTTGATTCTAATTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCGGTTGTTACGGTTGTTTCCCCTGtt                                                                                                                       >  1:473792/1‑141 (MQ=255)                   aTTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCg                                                                                                                   <  1:1129910/141‑1 (MQ=255)                       tACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑GGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATc                                                                                                               >  1:606238/1‑141 (MQ=255)                       tACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATc                                                                                                               >  1:894386/1‑141 (MQ=255)                         cTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCAc                                                                                                             <  1:1343509/141‑1 (MQ=255)                         cTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCAc                                                                                                             >  1:453544/1‑141 (MQ=255)                         cTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCAc                                                                                                             >  1:396609/1‑141 (MQ=255)                         cTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCAc                                                                                                             >  1:811751/1‑141 (MQ=255)                           tCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTAATGTTGTTTCACCTGTTGCCGCATCACta                                                                                                           >  1:957085/1‑141 (MQ=255)                              ggTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACtatta                                                                                                        >  1:1157834/1‑141 (MQ=255)                              ggTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACtatta                                                                                                        >  1:901399/1‑141 (MQ=255)                                tttACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTattatt                                                                                                      >  1:427498/1‑141 (MQ=255)                                tttACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTattatt                                                                                                      >  1:1343966/1‑141 (MQ=255)                                 ttACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTTCTGATGTTACTGTTGTTTTACCTGGTGCCTCATCACTATTAttt                                                                                                     <  1:751086/141‑1 (MQ=255)                                         tACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGtgttgt                                                                                             >  1:132090/1‑141 (MQ=255)                                         tACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACGGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGtgttgt                                                                                             >  1:795424/1‑141 (MQ=255)                                                ttATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGaa                                                                                      <  1:277858/141‑1 (MQ=255)                                                 tATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAg                                                                                     >  1:464908/1‑141 (MQ=255)                                                 tATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAg                                                                                     >  1:1209977/1‑141 (MQ=255)                                                 tATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAg                                                                                     >  1:1254361/1‑141 (MQ=255)                                                 tATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATAACTATTATTTGGTGTTGTCgggggag                                                                                     >  1:393751/1‑136 (MQ=255)                                                   tCCATTGTCAAACTGTTTGTTGATACATCTACACTAGAATTGTTATTACCATGGCAGTTATCCTTTGCATCATC‑TGTTGCTGATGTTACTGTGGTTGTACCTGTGGCCTCATCACTATTAGTTGGTGTTGTCGGAGAAGCg                                                                                   >  1:1007869/1‑141 (MQ=255)                                                    ccATCGCCGAACTGCTTGTTGCTCCACCTTCACTAGAATTCCTATTAACTTGCGCTTTATCATTTGCATCATC‑AGTTGCCGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGt                                                                                  <  1:162605/141‑1 (MQ=255)                                                     cATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTc                                                                                 >  1:1144592/1‑141 (MQ=255)                                                      cttGTCGGACTGTTTGTTTATGCCTCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCt                                                                                <  1:17648/140‑1 (MQ=255)                                                         gTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCt                                                                             >  1:516037/1‑141 (MQ=255)                                                              aCTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGcc                                                                        >  1:1253044/1‑141 (MQ=255)                                                                   ttgttgATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATCATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTac                                                                   >  1:519309/1‑140 (MQ=255)                                                                          tGCATCTACACTAGCACTGTTATTAGCTTCCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTgtcgt                                                            <  1:262262/141‑1 (MQ=255)                                                                          tGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTgtcgt                                                            <  1:361166/141‑1 (MQ=255)                                                                           gCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCCCACGTTTCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTgtcgtc                                                           >  1:1358088/1‑141 (MQ=255)                                                                           gCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTgtcgtc                                                           >  1:396393/1‑141 (MQ=255)                                                                           gCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTgtcgtc                                                           >  1:440438/1‑141 (MQ=255)                                                                           gCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTACACATTAAATTTTTCGGAGAAGCGTCTGCTTTGCCATTAGCTgtcgtc                                                           >  1:710618/1‑141 (MQ=255)                                                                           gCATCTACACTAGAATCGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTgtcgtc                                                           >  1:681787/1‑141 (MQ=255)                                                                               cTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAg                                                       >  1:981494/1‑141 (MQ=255)                                                                                 acacTAAAAAGGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTACTTTGCCATTAGCTGTCGTCTCAGAt                                                     >  1:1010719/1‑141 (MQ=255)                                                                                  cacTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGAtc                                                    >  1:94188/1‑140 (MQ=255)                                                                                    cTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCGTTGCCATTAGCTGTCGTCTCAGATACg                                                  >  1:126784/1‑141 (MQ=255)                                                                                     tAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGt                                                 <  1:1049357/141‑1 (MQ=255)                                                                                     tAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGt                                                 <  1:557770/141‑1 (MQ=255)                                                                                         aTTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAgg                                             <  1:1203415/141‑1 (MQ=255)                                                                                         aTTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAgg                                             <  1:332619/141‑1 (MQ=255)                                                                                           tGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTGGCTGTCGTCTCAGATACGTTAGGtt                                           >  1:1163285/1‑141 (MQ=255)                                                                                               attaGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTcc                                       >  1:91654/1‑141 (MQ=255)                                                                                                 taGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAg                                     <  1:479398/141‑1 (MQ=255)                                                                                                  aGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGt                                    >  1:1174264/1‑141 (MQ=255)                                                                                                      tGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTAttt                                <  1:1341173/141‑1 (MQ=255)                                                                                                        cGGTTTATCATTTGCATCATC‑AGTTGCCGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTc                              <  1:152093/141‑1 (MQ=255)                                                                                                         ggTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGACGCGTCTGCTTTGCCATTACCTGTCGTCTCAGATACGTTAGGTTGTCCAGTACTTTCt                             >  1:1316839/1‑141 (MQ=255)                                                                                                         ggTTTATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGGTGTCGGAGAAACACCCGCTTAGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCt                             >  1:1294719/1‑141 (MQ=255)                                                                                                            ttATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGgt                          >  1:672006/1‑141 (MQ=255)                                                                                                             tATCATTTGCATCATG‑AGTTGCTGACGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGgtg                         >  1:687399/1‑141 (MQ=255)                                                                                                             tATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGgtg                         >  1:399715/1‑141 (MQ=255)                                                                                                             tATCATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGgtg                         >  1:1065879/1‑141 (MQ=255)                                                                                                                cATTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTg                      >  1:198536/1‑141 (MQ=255)                                                                                                                 aTTTGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGc                     >  1:536775/1‑141 (MQ=255)                                                                                                                    tGCATCATC‑CGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCAtt                  <  1:1264406/141‑1 (MQ=255)                                                                                                                    tGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCAtt                  <  1:365482/141‑1 (MQ=255)                                                                                                                    tGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCAtt                  <  1:1339975/141‑1 (MQ=255)                                                                                                                    tGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCAtt                  <  1:108111/141‑1 (MQ=255)                                                                                                                    tGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCAtt                  <  1:138117/141‑1 (MQ=255)                                                                                                                    tGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCAtt                  <  1:275910/141‑1 (MQ=255)                                                                                                                    tGCATCATC‑AGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCAtt                  <  1:579753/141‑1 (MQ=255)                                                                                                                        tcatc‑aGTTGCTGGTGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCa              <  1:163603/141‑1 (MQ=255)                                                                                                                        tcatc‑aGTTGCTGATGTTACTGTTGTTTCACCTGTTTCCGCATCACTATTATTTAGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATGCGTTAGGTTGTCCAGTATGTTTTGGTGTTGCATTAGCa              <  1:766760/141‑1 (MQ=255)                                                                                                                        tcatc‑aGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTGTTTTTTGGTGTTGCATTAGCa              <  1:701510/141‑1 (MQ=255)                                                                                                                        tcatc‑aGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCa              <  1:1332140/141‑1 (MQ=255)                                                                                                                           tc‑aGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCAttt           >  1:59176/1‑141 (MQ=255)                                                                                                                            c‑aGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCGGTATTTTCTGGTGTTGCATTAGCATTTg          >  1:1082457/1‑141 (MQ=255)                                                                                                                            c‑aGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTg          >  1:533391/1‑141 (MQ=255)                                                                                                                            c‑aGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTg          >  1:1241160/1‑141 (MQ=255)                                                                                                                            c‑aGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTg          >  1:40099/1‑141 (MQ=255)                                                                                                                                 tGCTGATGTTACTGTTGTTTCCCCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAAtt      <  1:1005871/141‑1 (MQ=255)                                                                                                                                     gATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAATTTGCt  <  1:11937/141‑1 (MQ=255)                                                                                                                                     gATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAATTTGCt  <  1:690589/141‑1 (MQ=255)                                                                                                                                           |                                                                                                                                       TTGTGCCGTTATTAGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATC‑AGTTGCTGATGTTGCTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAATTTGCT  >  CP000730/2279568‑2279839

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑