| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | = 528477 | 79 (0.800) | 4 (0.050) | 4/230 | NT | 5.5% | intergenic (+18/‑149) | tatD/rnmV | TatD family deoxyribonuclease/hypothetical protein |
| ? | CP000730 | = 528526 | 68 (0.770) | intergenic (+67/‑100) | tatD/rnmV | TatD family deoxyribonuclease/hypothetical protein | |||||
TAGAGGGAAGCGAAATGAACCGGCGAGAGTAACTTTAGTAGCTGAACAAATTGCTGAATTAAAAGGCTTATCTTATGAAGAAGTGTGCGAACAAACAACTAAAAATGCAGAGAAATTGTTTAATTTAAATTCATAAAGTTAAAAGTGAGAAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/528324‑528477‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaagtgagaaagaACCATAGCATATTAAACGAATATAGCATCGTTTACATTTATGGCGGTGATCTTTCTCACTTTTAACTTTATGAATTTAAATTAAACAATTTCTCTGCATTTTTAGTTGTTTGTTCGCACACTTCTTCATAAGATAAGCC < CP000730/528526‑528388 TAGAGGGAAGCGAAATGAACCGGCGAGAGTAACTTTAGTAGCTGAACAAATTGCTGAATTAAAAGGCTTATCTTATGAAGAAGTGTGCGAACAAACAACTAAAAATGCAGAGAAATTGTTTAATTTAAATTCATAAAGTTA < 2:844274/141‑1 GAGGGAAGCGAAATGAACCGGCGAGAGTAACTTTAGTAGCTGAACAAATTGCTGAATTAAAAGGCTTATCTTATGAAGAAGTGTGAAAAAAAAAAAAAAAAAATGCAGAGAAATTGTTTAATTTAAATTCATAAAGTTAAA < 2:566426/141‑1 AGGGAAGCGAAATGAACCGGCGAGAGTAACTTTAGTAGCTGAACAAATTGCTGAATTAAAAGGCTTATCTTATGAAGAAGTGTGCGAACAAACAACTAAAAATGCAGAGAAATTGTTTAATTTAAATTCATAAAGTTAAAA < 2:694141/141‑1 GGAAGCGAAATGAACCGGCGAGAGTAACTTTAGTAGCTGAACAAATTGCTGAATTAAAAGGCTTATCTTATGAAGAAGTGTGCGAACAAACAACTAAAAATGCAGAGAAATTGTTTAATTTAAATTCATAAAGTTAAAAGT < 1:8225/141‑1 GAAGCGAAATGAACCGGCGAGAGTAACTTTAGTAGCTGAACAAATTGCTGAATTAAAAGGCTTATCTTATGAAGAAGTGTGCGAACAAACAACTAAAAATGCAGAGAAATTGTTTAATTTAAATTCATAAAGTTAAAAGTG < 1:717064/141‑1 AAGCGAAATGAACCGGCGAGAGTAACTTTAGTAGCTGAACAAATTGCTGAATTAAAAGGCTTATCTTATGAAGAAGTGTGCGAACAAACAACTAAAAATGCAGAGAAATTGTTTAATTTAAATTCATAAAGTTAAAAGTGA > 1:1164389/1‑141 AGCGAAATGAACCGGCGAGAGTAACTTTAGTAGCTGAACAAATTGCTGAATTAAAAGGCTTATCTTATGAAGAAGTGTGCGAACAAACAACTAAAAATGCAGAGAAATTGTTTAATTTAAATTCATAAAGTTAAAAGTGAG > 2:628351/1‑141 AAATGAACCGGCGAGAGTAACTTTAGTAGCTGAACAAATTGCTGAATTAAAAGGCTTATCTTATGAAGAAGTGTGCGAACAAACAACTAAAAATGCAGAGAAATTGTTTAATTTAAATTCATAAAGTTAAAAGTGAGAAAG > 2:1083690/1‑141 AATGAACCGGCGAGAGTAACTTTAGTAGCTGAACAAATTGCTGAATTAAAAGGCTTATCTTATGAAGAAGGGTGCGAACAAACAACTAAAAATGCAGAGAAATTGTTTAATTTAAATTCATAAAGTTAAAAGTGAGAAAGA > 2:304791/1‑141 ATGAAGAAGTGTGCGAACAAACAACTAAAAATGCAGAGAAATTGTTTAATTTAAATTCATAAAGTTAAAAGTGAGAAAGAACCATAGCATATTAAACGAATATAGCATCGTTTACATTTATGGCGGTGATCTTTCTCACTT < 1:166289/141‑1 AGTGTGCGAACAAACAACTAAAAATGCAGAGAAATTGTTTAATTTAAATTCATAAAGTTAAAAGTGAGAAAGAACCATAGCATATTAAACGAATATAGCATCGTTTACATTTATGGCG > 1:59633/1‑118 AGTGTGCGAACAAACAACTAAAAATGCAGAGAAATTGTTTAATTTAAATTCATAAAGTTAAAAGTGAGAAAGAACCATAGCATATTAAACGAATATAGCATCGTTTACATTTATGGCG < 2:59633/118‑1 TGTGCGAACAAACAACTAAAAATGCAGAGAAATTGTTTAATTTAAATTCATAAAGTTAAAAGTGAGAAAGAACCATAGCATATTAAACGAATATAGCATCGTTTACATTTATGGCGGTGATCTTTCTCACTTTTAACTTTA < 1:963997/141‑1 AAAAGTGAGAAAGAACCATAGCATATTAAACGAATATAGCATCGTTTACATTTATGGCGGTGATCTTTCTCACTTTTAACTTTATGAATTTAAATTAAACAATTTCTCTGCATTTTTAGTTGTTTGTTCGCACNCTTCTTC > 2:896664/1‑141 AAGTGAGAAAGAACCATAGCATATTAAACGAATATAGCATCGTTTACATTTATGGCGGTGATCTTTCTCACTTTTAACTTTATGAATTTAAATTAAACAATTTCTCTGCATTTTTAGTTGTTTGTTCGCACACTTCTTCAT < 1:1176295/141‑1 GTGAGAAAGAACCATAGCATATTAAACGAATATAGCATCGTTTACATTTATGGCGGTGATCTTTCTCACTTTTAACTTTATGAATTTAAATTAAACAATTTCTCTGCATTTTTAGTTGTTTGTTCGCACACTTCTTCATAA > 1:304791/1‑141 TGAGAAAGAACCATAGCATATTAAACGAATATAGCATCGTTTACATTTATGGCGGTGATCTTTCTCACTTTTAACTTTATGAATTTAAATTAAACAATTTCTCTGCATTTTTAGTTGTTTGTTCGCACACTTCTTCATAAG < 2:200472/141‑1 GAGAAAGAACCATAGCATATTAAACGAATATAGCATCGTTTACATTTATGGCGGTGATCTTTCTCACTTTTAACTTTATGAATTTAAATTAAACAATTTCTCTGCATTTTTAGTTGTTTGTTCGCACACTTCTTCATAAGA < 2:191805/141‑1 AAAGAACCATAGCATATTAAACGAATATAGCATCGTTTACATTTATGGCGGTGATCTTTCTCACTTTTAACTTTATGAATTTAAATTAAACAATTTCTCTGCATTTTTAGTTGTTTGTTCGCACACTTCTTCATAAGATAA < 2:5822/141‑1 AAAGAACCATAGCATATTAAACGAATATAGCATCGTTTACATTTATGGCGGTGATCTTTCTCACTTTTAACTTTATGAATTTAAATTAAACAATTTCTCTGCATTTTTAGTTGTTTGTTCGCACACTTCTTCATAAGATAA < 2:319203/141‑1 AAAGAACCATAGCATATTAAACGAATATAGCATCGTTTACATTTATGGCGGTGATCTTTCTCACTTTTAACTTTATGAATTTAAATTAAACAATTTCTCTGCATTTTTAGTTGTTTGTTCGCACACTTCTTCATAAGATAA < 1:1162613/141‑1 AAGAACCATAGCATATTAAACGAATATAGCATCGTTTACATTTATGGCGGTGATCTTTCTCACTTTTAACTTTATGAATTTAAATTAAACAATTTCTCTGCATTTTTAGTTGTTTGTTCGCACACTTCTTCATAAGATAAG < 2:201234/141‑1 AGAACCATAGCATATTAAACGAATATAGCATCGTTTACATTTATGGCGGTGATCTTTCTCACTTTTAACTTTATGAATTTAAATTAAACAATTTCTCTGCATTTTTAGTTGTTTGTTCGCACACTTCTTCATAAGATAAGC < 1:1014463/141‑1 GAACCATAGCATATTAAACGAATATAGCATCGTTTACATTTATGGCGGTGATCTTTCTCACTTTTAACTTTATGAATTTAAATTAAACAATTTCTCTGCATTTTTAGTTGTTTGTTCGCACACTTCTTCATAAGATAAGCC < 2:366795/141‑1 GAACCATAGCATATTAAACGAATATAGCATCGTTTACATTTATGGCGGTGATCTTTCTCACTTTTAACTTTATGAATTTAAATTAAACAATTTCTCTGCATTTTTAGTTGTTTGTTCGCACACTTCTTCATAAGATAAGCC > 2:799471/1‑141 TAGAGGGAAGCGAAATGAACCGGCGAGAGTAACTTTAGTAGCTGAACAAATTGCTGAATTAAAAGGCTTATCTTATGAAGAAGTGTGCGAACAAACAACTAAAAATGCAGAGAAATTGTTTAATTTAAATTCATAAAGTTAAAAGTGAGAAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/528324‑528477‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaagtgagaaagaACCATAGCATATTAAACGAATATAGCATCGTTTACATTTATGGCGGTGATCTTTCTCACTTTTAACTTTATGAATTTAAATTAAACAATTTCTCTGCATTTTTAGTTGTTTGTTCGCACACTTCTTCATAAGATAAGCC < CP000730/528526‑528388 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |