BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	2545705 =	105 (1.060)	3 (0.030)	3/234	NT	3.3%	intergenic (+6/+46)	hlgB/USA300HOU_2406	gamma hemolysin component B/hypothetical membrane protein
*	?	CP000730	2545745 =	78 (0.870)	3 (0.030)	3/234	NT	3.3%	intergenic (+46/+6)	hlgB/USA300HOU_2406	gamma hemolysin component B/hypothetical membrane protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 126 total aligned reads displayed.

TGGAATGGCTTCTACTGGGCAGGCGCAAATTATAAAAACTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACA  >  CP000730/2545565‑2545845

tGGAATGGCTTCTACTGGGCAGGCGCAAATTATAAAAACTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTa                                                                                                                                               >  1:586802/1‑141 (MQ=255)

tGGAATGGCTTCTACTGGGCAGGCGCAAATTATAAAAACTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTa                                                                                                                                               >  2:201427/1‑141 (MQ=255)

tGGAATGGCTTCTACTGGGCAGGCGCAAATTATAAAAACTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTa                                                                                                                                               >  1:1090556/1‑141 (MQ=255)

  ttatctattattttaaatttacctgtgtgggtagtgttgttaaacgcgattccaggcgtaatattcactttaattgtagctattcctttatatctcacattgagaaaaagaatggcagtattactaagataataaatcaaa                                                                                                                                             >  2:613183‑M1/139‑141 (MQ=255)

  ttatctattattttaaatttacctgtgtgggtagtgttgttaaacgcgattccaggcgtaatattcactttaattgtagctattcctttatatctcacattgagaaaaagaatggcagtattactaagataataaatcaaa                                                                                                                                             <  1:386908‑M1/3‑1 (MQ=255)

    atctattattttaaatttacctgtgtgggtagtgttgttaaacgcgattccaggcgtaatattcactttaattgtagctattcctttatatctcacattgagaaaaagaatggcagtattactaagataataaatcAAAac                                                                                                                                           <  2:830602‑M1/5‑1 (MQ=255)

      ggCTTCTACTGGGCAGGCGCAAATTATAAAAACTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAacac                                                                                                                                         <  1:609289/141‑1 (MQ=255)

        cTTCTACTGGGCAGGCGCAAATTATAAAAACTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACgg                                                                                                                                       >  1:1158604/1‑141 (MQ=255)

        cTTCTACTGGGCAGGCGCAAATTATAAAAACTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACgg                                                                                                                                       >  1:757868/1‑141 (MQ=255)

        cTTCTACTGGGCAGGCGCAAATTATAAAAACTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACgg                                                                                                                                       <  1:216789/141‑1 (MQ=255)

         ttattttaaatttacctgtgtgggtagtgttgttaaacgcgattccaggcgtaatattcactttaattgtagctattcctttatatctcacattgagaaaaagaatggcagtattactaagataataaatcAAAACACGGt                                                                                                                                      >  1:167745‑M1/132‑141 (MQ=255)

           attttaaatttacctgtgtgggtagtgttgttaaacgcgattccaggcgtaatattcactttaattgtagctattcctttatatctcacattgagaaaaagaatggcagtattactaagataataaatcAAAAcacggacg                                                                                                                                    <  1:844989‑M1/12‑4 (MQ=255)

              cTGGGCAGGCGCAAATTATAAAAACTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCa                                                                                                                                 <  2:1170102/141‑1 (MQ=255)

                 ggCAGGCGCAAATTATAAAAACTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACa                                                                                                                              >  2:225585/1‑141 (MQ=255)

                  gCAGGCGCAAATTATAAAAACTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAg                                                                                                                             <  1:496892/141‑1 (MQ=255)

                  gCAGGCGCAAATTATAAAAACTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAg                                                                                                                             >  2:1018362/1‑141 (MQ=255)

                  gCAGGCGCAAATTATAAAAACTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAg                                                                                                                             >  2:770860/1‑141 (MQ=255)

                  gCAGGCGCAAATTATAAAAACTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAg                                                                                                                             >  1:283072/1‑141 (MQ=255)

                  gCAGGCGCAAATTATAAAAACTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAg                                                                                                                             >  2:1123457/1‑141 (MQ=255)

                      gcgcAAATTATAAAAACTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAAt                                                                                                                         >  1:211161/1‑141 (MQ=255)

                      gcgcAAATTATAAAAACTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAAt                                                                                                                         <  1:975930/141‑1 (MQ=255)

                          aaaTTATAAAAACTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATtgt‑g                                                                                                                    <  1:1061818/141‑1 (MQ=255)

                           aaTTATAAAAACTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑ga                                                                                                                   >  1:402930/1‑141 (MQ=255)

                             ttATAAAAACTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGACGCCAACAGTAATTGT‑gacg                                                                                                                 >  2:1148137/1‑141 (MQ=255)

                                 aaaaaCTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCg                                                                                                             <  1:439819/141‑1 (MQ=255)

                                  aaaaCTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCgt                                                                                                            >  1:1002855/1‑141 (MQ=255)

                                   aaaCTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCgtg                                                                                                           <  1:875126/141‑1 (MQ=255)

                                   aaaCTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCgtg                                                                                                           <  2:474343/141‑1 (MQ=255)

                                   aaaCTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCgtg                                                                                                           >  1:654822/1‑141 (MQ=255)

                                     aCTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAGATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGtt                                                                                                         <  1:229533/141‑1 (MQ=255)

                                     aCTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGtt                                                                                                         >  1:182792/1‑141 (MQ=255)

                                        ttAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGTCCGTGTTTTg                                                                                                      <  2:93616/141‑1 (MQ=255)

                                          aaaaCTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGAt                                                                                                    <  1:86277/141‑1 (MQ=255)

                                          aaaaCTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGAt                                                                                                    <  1:968063/141‑1 (MQ=255)

                                           aaaCTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGAtt                                                                                                   >  1:187217/1‑141 (MQ=255)

                                           aaaCTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGAtt                                                                                                   >  1:1026548/1‑141 (MQ=255)

                                           aaaCTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGAtt                                                                                                   >  1:863452/1‑141 (MQ=255)

                                            aaCTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGAttt                                                                                                  >  1:1029731/1‑141 (MQ=255)

                                            aaCTAGAACATTCAAATCAACATAGGAAATTGATTGGGAAAATCACAAAGTGAAATTGTGAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGAgtt                                                                                                  >  2:113448/1‑141 (MQ=255)

                                             aCTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATtta                                                                                                 >  2:1111845/1‑141 (MQ=255)

                                                 gAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTtattat                                                                                             >  2:808469/1‑141 (MQ=255)

                                                     aTTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTAT‑GACGACCGTGTTTTGATTTATTATCTTa                                                                                         <  1:301941/141‑1 (MQ=255)

                                                          aaTCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAAt                                                                                    >  2:386908/1‑141 (MQ=255)

                                                             cAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACt                                                                                 <  2:757868/141‑1 (MQ=255)

                                                              aaCATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTg                                                                                <  1:520463/141‑1 (MQ=255)

                                                              aaCATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGGGTATTGATTTATTATCTTAGTAATACta                                                                                >  2:877079/1‑140 (MQ=255)

                                                               aCATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGc                                                                               >  2:770741/1‑141 (MQ=255)

                                                                cATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGCAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGCTTTGATTTATTATCTTAGTTATACTGcc                                                                              >  2:253427/1‑141 (MQ=255)

                                                                cATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGcc                                                                              <  2:473421/141‑1 (MQ=255)

                                                                cATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGcc                                                                              <  1:33652/141‑1 (MQ=255)

                                                                  tatGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCAt                                                                            >  2:1086734/1‑141 (MQ=255)

                                                                  tatGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATCGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCAt                                                                            >  1:939414/1‑141 (MQ=255)

                                                                  tatGAAATTGATTGGGAAAAGAACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCAt                                                                            <  1:1118480/141‑1 (MQ=255)

                                                                   catatgttgattgGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGACGCCAACAGCAATTGT‑GACGACCGAGTTTTGATTTATTAGCGTAGTAATACTGCCAtt                                                                           >  2:507175/7‑141 (MQ=255)

                                                                    tGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTc                                                                          <  2:169209/141‑1 (MQ=255)

                                                                     gAAAATGATTGAGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCt                                                                         <  2:352229/141‑1 (MQ=255)

                                                                          tgattgGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTtc                                                                    <  2:715294/141‑1 (MQ=255)

                                                                          tgattgGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTtc                                                                    <  2:515685/141‑1 (MQ=255)

                                                                              tgGGAAAATCACAGAGTGAAATTGTTAGATACGAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGCCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTCTTATCTTAGTAATACTGCCATTCTTTTTCTCaa                                                                >  2:432424/1‑141 (MQ=255)

                                                                                ggAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAAtg                                                              >  1:736611/1‑141 (MQ=255)

                                                                                   aactCACAAAGTGAAATTGTTAGATACAAAAGAACCTGAAAACAATAAATAGCTGGTATAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTga                                                           <  2:1113780/138‑1 (MQ=255)

                                                                                   aaaTCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTga                                                           >  2:1044225/1‑141 (MQ=255)

                                                                                      tCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGat                                                        <  2:342166/141‑1 (MQ=255)

                                                                                       cacaAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGata                                                       >  2:629589/1‑141 (MQ=255)

                                                                                         caAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGAtata                                                     <  2:924419/141‑1 (MQ=255)

                                                                                         caAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGAtata                                                     <  1:996549/141‑1 (MQ=255)

                                                                                         caAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGAtata                                                     >  1:560879/1‑141 (MQ=255)

                                                                                         caAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAAGACTGCCATTCTTTTTCTCAATGTGAGAtata                                                     <  2:72203/141‑1 (MQ=255)

                                                                                          aaaGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATaa                                                    >  1:901985/1‑141 (MQ=255)

                                                                                          aaaGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATaa                                                    >  1:77012/1‑141 (MQ=255)

                                                                                            tatctcacattgagaaaaagaatggcagtattactaagataataaatcAAAACACGGTCGTCA‑CAATTACTGTTGGCGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAg                                                  <  1:485778‑M1/93‑1 (MQ=255)

                                                                                            aGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAg                                                  <  2:187217/141‑1 (MQ=255)

                                                                                               gAAATTGTTAGATACAAAAGAAACTGAAAACAATCAATAGCTAGTAAAACTCGGTCGCCAACAGTAATTGT‑GACTACCGTATTTTGATTTATTATCTTAGTAATACTGCCATCCTTTTTCTCAATGTGGGATATAAAGGaa                                               <  2:1023218/141‑1 (MQ=255)

                                                                                                  aTTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAg                                            >  1:896773/1‑141 (MQ=255)

                                                                                                      ttAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTAc                                        <  2:304994/141‑1 (MQ=255)

                                                                                                        aGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACaa                                      <  1:650811/141‑1 (MQ=255)

                                                                                                          aTACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAAtt                                    <  2:954650/141‑1 (MQ=255)

                                                                                                          aTACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAAtt                                    <  1:658763/141‑1 (MQ=255)

                                                                                                               aaaGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGt                               <  1:853391/141‑1 (MQ=255)

                                                                                                                aaGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTg                              <  1:265837/141‑1 (MQ=255)

                                                                                                                 aGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGa                             >  2:23287/1‑141 (MQ=255)

                                                                                                                  tggcagtattactaagataataaatcAAAACACGGTCGTCACAATTACTGTT‑GGCGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAAt                                     <  2:171094‑M1/106‑1 (MQ=255)

                                                                                                                  tggcagtattactaagataataaatcAAAACACGGTCGTCA‑CAATTACTGTTGGCGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAAt                                     >  1:171094‑M1/27‑132 (MQ=255)

                                                                                                                  gAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGaa                            >  1:665560/1‑141 (MQ=255)

                                                                                                                     aCTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAatat                         >  1:82819/1‑141 (MQ=255)

                                                                                                                         aaaaCAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACg                     >  2:630533/1‑141 (MQ=255)

                                                                                                                         aaaaCAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATAGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACg                     >  2:874775/1‑141 (MQ=255)

                                                                                                                            aCAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCt                  <  1:807856/141‑1 (MQ=255)

                                                                                                                            aCAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCt                  <  1:901966/141‑1 (MQ=255)

                                                                                                                              aataaataGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTgg                >  1:830602/1‑141 (MQ=255)

                                                                                                                               ataaataGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGa               <  2:1102753/141‑1 (MQ=255)

                                                                                                                                 aaataGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAAt             <  1:219744/141‑1 (MQ=255)

                                                                                                                                  aataGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATc            <  2:1029731/141‑1 (MQ=255)

                                                                                                                                  aataGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATc            >  1:833478/1‑141 (MQ=255)

                                                                                                                                    taGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTCTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATcgc          >  1:1150859/1‑141 (MQ=255)

                                                                                                                                     aGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATcgcg         <  1:398957/141‑1 (MQ=255)

                                                                                                                                      gCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGt        >  2:764659/1‑141 (MQ=255)

                                                                                                                                          gTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTaa    <  2:244502/141‑1 (MQ=255)

                                                                                                                                           tAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTaac   <  1:571930/141‑1 (MQ=255)

                                                                                                                                           tAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTaac   <  2:484764/141‑1 (MQ=255)

TGGAATGGCTTCTACTGGGCAGGCGCAAATTATAAAAACTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACA  >  CP000730/2545565‑2545845

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.