BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	2793464 =	132 (1.330)	3 (0.030)	3/238	NT	2.5%	coding (2179/2982 nt)	pip	possible bacteriophage infection protein
*	?	CP000730	2793513 =	111 (1.210)	3 (0.030)	3/238	NT	2.5%	coding (2130/2982 nt)	pip	possible bacteriophage infection protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 151 total aligned reads displayed.

GCAATAATACCCGCTTGCTTTTTCAAATCATTCTTAAGTGTGTCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCT  >  CP000730/2793325‑2793603

gCAATAATACCCGCTTGCTTTTTTTTTTTTTTTTTAAGTGTGACGATTAATTTGTCGACTGTATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGaa                                                                                                                                             >  2:388388/1‑141 (MQ=255)

gCAATAATACCCGCTTGCTTTTTCAAATCATTCTTAAGTGTGTCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGaa                                                                                                                                             >  1:1139525/1‑141 (MQ=255)

gCAATAATACCCGCTTGCTTTTTCAAATCATTCTTAAGTGTGTCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGaa                                                                                                                                             >  1:1001545/1‑141 (MQ=255)

 gatgtagctaaagctgctaactttgtgcgcaatgacttaccacagttagaacagcgattaactaatgcgacagcaagtgtgaataaaaatttaccaacgttattaaatggttatgatcaagcggtaggattactaaataaa                                                                                                                                            <  1:826900‑M1/3‑1 (MQ=255)

  atgtagctaaagctgctaactttgtgcgcaatgacttaccacagttagaacagcgattaactaatgcgacagcaagtgtgaataaaaatttaccaacgttattaaatggttatgatcaagcggtaggattactaaataaaa                                                                                                                                           <  2:514284‑M1/4‑1 (MQ=255)

  aataatACCCGCTTGCTTTTTCAAATCATTCTTAAGTGTGTCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGaaaa                                                                                                                                           >  1:747483/1‑141 (MQ=255)

      agctaaagctgctaactttgtgcgcaatgacttaccacagttagaacagcgattaactaatgcgacagcaagtgtgaataaaaatttaccaacgttattaaatggttatgatcaagcggtaggattactaaatAAAAATCa                                                                                                                                       <  2:281550‑M1/8‑1 (MQ=255)

      agctaaagctgctaactttgtgcgcaatgacttaccacagttagaacagcgattaactaatgcgacagcaagtgtgaataaaaatttaccaacgttattaaatggttatgatcaagcggtaggattactaaatAAAAATCa                                                                                                                                       <  1:811064‑M1/8‑1 (MQ=255)

      agctaaagctgctaactttgtgcgcaatgacttaccacagttagaacagcgattaactaatgcgacagcaagtgtgaataaaaatttaccaacgttattaaatggttatgatcaagcggtaggattactaaatAAAAATCa                                                                                                                                       <  2:108913‑M1/8‑1 (MQ=255)

            gcttgcttTTTCAAATCATTCTTAAGTGTGTCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTaaa                                                                                                                                 >  1:514284/1‑141 (MQ=255)

            gcttgcttTTTCAAATCATTCTTAAGTGTGTCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTaaa                                                                                                                                 <  1:839872/141‑1 (MQ=255)

                    tttCAAATCATTCTTAAGTGTGTCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATaa                                                                                                                         <  1:824744/141‑1 (MQ=255)

                       cAAATCATTCTTAAGTGTGTCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGc                                                                                                                      <  2:150668/141‑1 (MQ=255)

                        aaaTCATTCTTAAGTGTGTCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGcc                                                                                                                     <  1:1164149/141‑1 (MQ=255)

                         ttttttttttAAGTGTGTCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTTAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑t                                                                                                                   >  2:420519/9‑141 (MQ=255)

                         aaTCATTCTTAAGTGTGTCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑t                                                                                                                   <  2:866900/141‑1 (MQ=255)

                          aTCATTCTTAAGTGTGTCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑tt                                                                                                                  <  1:895802/141‑1 (MQ=255)

                           tCATTCTTAAGTGTGTCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑ttt                                                                                                                 >  1:1167741/1‑141 (MQ=255)

                            cATTCTTAAGTGTGTCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑tttt                                                                                                                <  2:390843/141‑1 (MQ=255)

                                cTTAAGTGTGTCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGc                                                                                                            >  1:1150220/1‑141 (MQ=255)

                                 ttAAGTGTGTCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCt                                                                                                           >  1:444420/1‑141 (MQ=255)

                                 ttAAGTGTGTCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCt                                                                                                           >  1:794644/1‑141 (MQ=255)

                                  tAAGTGTGTCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCtt                                                                                                          <  1:266530/141‑1 (MQ=255)

                                  tAAGTGTGTCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAAATTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTACATCTGATAAAGCC‑TTTTTCGCtt                                                                                                          >  1:743088/1‑141 (MQ=255)

                                      tgtgtCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTgg                                                                                                      <  1:316880/141‑1 (MQ=255)

                                      tgtgtCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTgg                                                                                                      >  1:1097724/1‑141 (MQ=255)

                                      tgtgtCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTgg                                                                                                      <  1:120270/141‑1 (MQ=255)

                                        tgtCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCt                                                                                                    <  1:978978/141‑1 (MQ=255)

                                        tgtCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCt                                                                                                    <  2:1132527/141‑1 (MQ=255)

                                        tgtCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCt                                                                                                    <  2:33273/141‑1 (MQ=255)

                                         gtCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAANTCTGATAAAGCC‑NTTTTCGCTTGTGGCTg                                                                                                   <  1:702694/141‑1 (MQ=255)

                                         gtCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTg                                                                                                   <  2:861749/141‑1 (MQ=255)

                                          tCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGa                                                                                                  >  1:674373/1‑141 (MQ=255)

                                           cGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGAt                                                                                                 <  2:992306/141‑1 (MQ=255)

                                           cGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGAt                                                                                                 <  1:850888/141‑1 (MQ=255)

                                            gATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGAtt                                                                                                <  1:466554/141‑1 (MQ=255)

                                             gttagaacagcgattaactaatgcgacagcaagtgtgaataaaaatttaccaacgttattaaatggttatgatcaagcggtaggattactaaatAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGAttt                                                                                               >  2:552587‑M1/95‑141 (MQ=255)

                                              ttagaacagcgattaactaatgcgacagcaagtgtgaataaaaatttaccaacgttattaaatggttatgatcaagcggtaggattactaaatAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGAtttt                                                                                              >  1:1036787‑M1/94‑141 (MQ=255)

                                                 aTTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTTTTTTTTTTTTTATCATCAGGCATTGTATGTTGTGAAAAATCATCTTAAGCTGGTAATTTC‑TTTTTCGTTTTTGGCTGATTtttat                                                                                           >  2:298965/1‑141 (MQ=255)

                                                   ttGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTtttattt                                                                                         >  2:501909/1‑141 (MQ=255)

                                                   ttGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTtttattt                                                                                         >  1:1178935/1‑141 (MQ=255)

                                                    tGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTtttattta                                                                                        >  1:111676/1‑141 (MQ=255)

                                                     gTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAg                                                                                       >  2:1076060/1‑141 (MQ=255)

                                                      tCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGt                                                                                      <  1:879678/141‑1 (MQ=255)

                                                        gACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTaa                                                                                    <  1:1138433/141‑1 (MQ=255)

                                                         aCTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAAt                                                                                   <  1:753183/141‑1 (MQ=255)

                                                         aCTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAAt                                                                                   <  2:1086447/141‑1 (MQ=255)

                                                           tGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATcc                                                                                 <  1:537681/141‑1 (MQ=255)

                                                            gCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCt                                                                                <  1:924810/141‑1 (MQ=255)

                                                            gCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCt                                                                                <  1:123112/141‑1 (MQ=255)

                                                             catcatCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTa                                                                               <  1:961070/141‑1 (MQ=255)

                                                                  tcTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCt                                                                          <  2:141197/141‑1 (MQ=255)

                                                                      tGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTTTTTTGTGGTTGTTTTTTATTTAGTAATGCTACGGCTTGAt                                                                      >  2:714009/1‑141 (MQ=255)

                                                                         cTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCAt                                                                   <  2:629503/141‑1 (MQ=255)

                                                                          tAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTATCGCTTGATCATa                                                                  >  2:1054195/1‑141 (MQ=255)

                                                                           aaTTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTTTTTCGTTGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATaa                                                                 >  2:947969/1‑141 (MQ=255)

                                                                            aTTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAAc                                                                >  1:618059/1‑141 (MQ=255)

                                                                            aTTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAAc                                                                >  1:747968/1‑141 (MQ=255)

                                                                             tttCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAAcc                                                               <  2:577721/141‑1 (MQ=255)

                                                                              ttCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCa                                                              <  2:54625/141‑1 (MQ=255)

                                                                                  tGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACCTCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTATTCCTACCGCTTGATCATAACCATTta                                                          <  2:954557/141‑1 (MQ=255)

                                                                                  tGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTta                                                          <  1:343405/141‑1 (MQ=255)

                                                                                  tGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTta                                                          >  1:178565/1‑141 (MQ=255)

                                                                                    aaaaTTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTtaat                                                        <  2:564744/141‑1 (MQ=255)

                                                                                     aaaTTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTtaata                                                       <  2:412411/141‑1 (MQ=255)

                                                                                            aTTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTgg                                                <  2:315579/141‑1 (MQ=255)

                                                                                             ttCGCTTTTTTTAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGt                                               >  2:725501/1‑141 (MQ=255)

                                                                                             ttCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGt                                               <  2:1178935/141‑1 (MQ=255)

                                                                                              tCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTa                                              >  2:235505/1‑141 (MQ=255)

                                                                                               cGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTaa                                             <  1:130027/141‑1 (MQ=255)

                                                                                               cGCTGTTTTCAAATCTTTTTCAACATCATGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTaa                                             <  2:799969/141‑1 (MQ=255)

                                                                                                 cTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAAt                                           >  1:179129/1‑141 (MQ=255)

                                                                                                  ttttttCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAAtt                                          <  2:1121963/141‑1 (MQ=255)

                                                                                                    ttttCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAAtttt                                        <  1:628148/141‑1 (MQ=255)

                                                                                                      ttCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTa                                      <  2:1028886/141‑1 (MQ=255)

                                                                                                       tCAAATTTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTAt                                     >  2:888283/1‑141 (MQ=255)

                                                                                                           aTCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTcac                                 <  1:673787/141‑1 (MQ=255)

                                                                                                           aTCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTCGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTcac                                 <  1:947969/141‑1 (MQ=255)

                                                                                                             cTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCacac                               <  1:52301/141‑1 (MQ=255)

                                                                                                              tttttCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACt                              <  2:468790/141‑1 (MQ=255)

                                                                                                                tttCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTg                            >  2:876821/1‑141 (MQ=255)

                                                                                                                 ttCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGc                           <  2:595961/141‑1 (MQ=255)

                                                                                                                  tCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCt                          >  1:970563/1‑141 (MQ=255)

                                                                                                                   cAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTg                         <  1:392731/141‑1 (MQ=255)

                                                                                                                    aaCATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTTTTTTTTTTTTTATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTTCTGt                        >  2:203533/1‑141 (MQ=255)

                                                                                                                        ttttgCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTTTTTTTTATTTTTTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGct                    >  2:124374/5‑140 (MQ=255)

                                                                                                                        tCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCa                    >  1:81335/1‑141 (MQ=255)

                                                                                                                        tCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCa                    <  2:220253/141‑1 (MQ=255)

                                                                                                                         cAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCAt                   <  2:657150/141‑1 (MQ=255)

                                                                                                                            gCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAg                >  1:187892/1‑141 (MQ=255)

                                                                                                                            gCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAg                >  1:793225/1‑141 (MQ=255)

                                                                                                                             cAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGt               >  2:39602/1‑141 (MQ=255)

                                                                                                                             cAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGt               <  1:1003804/141‑1 (MQ=255)

                                                                                                                              aaTTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCCTTTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGt               >  2:199852/1‑141 (MQ=255)

                                                                                                                               atttatttTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTa             >  1:384796/1‑141 (MQ=255)

                                                                                                                                   atttTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCg         <  1:103785/141‑1 (MQ=255)

                                                                                                                                        gagaAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCGCACTTGCTGTCGCATTAGTTAATCGCTGtt    <  2:1073970/141‑1 (MQ=255)

                                                                                                                                        gagaAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGtt    <  1:1078072/141‑1 (MQ=255)

                                                                                                                                        gagaAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGtt    <  1:702075/141‑1 (MQ=255)

                                                                                                                                          aAAAAAGCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCt  >  1:601731‑M1/2‑141 (MQ=255)

GCAATAATACCCGCTTGCTTTTTCAAATCATTCTTAAGTGTGTCGATTAATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCT  >  CP000730/2793325‑2793603

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.