| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 111,329 | T→A | 9.3% | N133K (AAT→AAA) | USA300HOU_0110 → | possible staphylococcal tandem lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 111,329 | 0 | T | A | 9.3% | 693.2 / 9.7 | 233 | N133K (AAT→AAA) | USA300HOU_0110 | possible staphylococcal tandem lipoprotein |
| Reads supporting (aligned to +/- strand): ref base T (122/83); new base A (2/26); total (124/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.65e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 235 total aligned reads displayed.
CAAATGGCAATTCAAAATAAAGGAGAAGCTCTAAAAATAAAAGGCATGCTTTTGAAGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAA > CP000730/111189‑111469 | aaaTGGCAATTCAAAATAAAGGAGAAGCTCTAAAAATAAAAGGCATGCTTTTGAAGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAGGACGGAGAAATACGAAGTAGCTCAGGATAATc > 1:281203/1‑141 (MQ=255) aaTGGCAATTCAAAATAAAGGGGAAGCGCTAAAAATAAAAGGCATGCTTTTGAAGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAAGAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑a < 1:27365/141‑1 (MQ=255) aTGGCAATTCAAAATAAAGGAGAAGCTCTAAAAATAAAAGGCATGCTTTTGAAGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑aa < 1:818845/141‑1 (MQ=255) tGGCAATTCAAAATAAAGGAGAAGCTCTAAAAATAAAAGGCATGCTTTTGAAGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑aaa < 1:244086/141‑1 (MQ=255) ggCAATTCAAAATAAAGGAGAAGCTCTAAAAATAAAAGGCATGCTTTTGAAGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑aaaa < 1:1111430/141‑1 (MQ=255) aaTTCAAAATAAAGGAGAAGCTCTAAAAATAAAAGGCATGCTTTTGAAGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑aaaaaaa > 1:1080185/1‑141 (MQ=255) aaaTAAAGGAGAAGCTCTAAAAATAAAAGGCATGCTTTTGAAGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATcc > 2:135251/1‑141 (MQ=255) aaaTAAAGGAGAAGCACAAAAAAAAAAAGAAATACATTTGAAGATAGAAAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTAAAAAAAAAA‑AAAAAAAATATcc < 2:772292/141‑1 (MQ=255) tAAAGGAGAAGCTCTAAAAATAAAAGGCATGCTTTTGAAGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGt > 1:485251/1‑141 (MQ=255) tAAAGGAGAAGCTCTAAAAATAAAAGGCATGCTTTTGAAGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGt < 1:416781/141‑1 (MQ=255) tAAAGGAAAAGCTATAAAAATAAAAGGCATGCTTTTGAAGATAGATAGAAAAACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGt < 1:396996/141‑1 (MQ=255) aaaGGAGAAGCTCTAAAAATAAAAGGCATGCTTTTGAAGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGtt > 2:464177/1‑141 (MQ=255) gagaAGCTCTAAAAATAAAAGGCATGCTTTTGAAGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTaaaa > 1:677475/1‑141 (MQ=255) gagaAGCTCTAAAAATAAAAGGCATGCTTTTGAAGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGAAAAAAA‑AAAAAAAATATCCAGTTaaaa < 2:777338/141‑1 (MQ=255) agaAGCTCTAAAAATAAAAGGCATGCTTTTGAAGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAAt > 1:102983/1‑141 (MQ=255) gaAGCTCTAAAAATAAAAGGCATGCTATTGAAGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAAAAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTaaaagg > 2:228447/1‑139 (MQ=255) gCTCTAAAAATAAAAGGCATGCTTTTGAAGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGAtt < 1:699625/141‑1 (MQ=255) tAAAAATAAAAGGCATGNTTTTGAAGATNGATANAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGAAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATtaata > 1:831811/1‑141 (MQ=255) tAAAAATAAAAGGCATGCTTTTGAAGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTAAGGATAATC‑AAAAAAGATATCCAGTTAAAATGAGtaata > 1:941270/1‑141 (MQ=255) aaaaGGCATGCTTTTGAAGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAAtt > 1:1014399/1‑141 (MQ=255) aaaGGCATGCTTTTGAAGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTc > 1:1064134/1‑141 (MQ=255) aaaGGCATGCTTTTGAAGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTc > 2:555996/1‑141 (MQ=255) aTGCTTTTGAAGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCCTTTCt < 2:896620/141‑1 (MQ=255) aTGCTTTTGAAGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGAATAATAATAAATTCATTTca > 1:205631/1‑140 (MQ=255) tccTTTTGAAGATAGATAGAAATACAAGACGTGCAAAAGGCTTCTACTAAACGAATGAAATAAGGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTa > 2:1004819/3‑141 (MQ=255) tGCTTTTGAAGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTa > 2:171088/1‑141 (MQ=255) cTTTTGAAGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACt < 1:266461/141‑1 (MQ=255) ttGAAGATAGAAAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAg < 1:1088406/141‑1 (MQ=255) tGAAGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTAAAAAAAAAA‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAgg < 2:1177236/141‑1 (MQ=255) gAAGATAGAAAGAAATACAAGAAGAGCAAAAGGAATTTACTATACTAATGAAAAAAAGACGGAGAAATACGAAGTAGCTAAAAAAAAAA‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGa < 2:152494/141‑1 (MQ=255) aaGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGaa > 1:577242/1‑141 (MQ=255) agatagatAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAg > 1:53386/1‑141 (MQ=255) gatagataGAAATACAAGCAGTTCAAAAGGATTTTACTAAACTAAAGAAATAAAGAGGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTAATTTCTACTGAGGAAGt > 2:959198/1‑141 (MQ=255) atagaAATACAAGAAGTGCAAAAGTATTTTACTATACTAATGAAATAAATACTAAGAAATACTAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAaag < 1:410773/141‑1 (MQ=255) atagaAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAaag < 2:497655/141‑1 (MQ=255) tagaAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAaaga > 1:927908/1‑141 (MQ=255) agaAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAaagaa > 2:533679/1‑141 (MQ=255) aCAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGAAAAAAC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAAc < 2:694201/141‑1 (MQ=255) aCAAGAAGTGCAAAAGGATTTTACTATACGAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAAc < 1:773766/141‑1 (MQ=255) cAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACa < 1:568810/141‑1 (MQ=255) aagaagTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACAt > 1:307868/1‑141 (MQ=255) aagTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATaaa > 2:638143/1‑141 (MQ=255) agTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATaaaa > 1:754483/1‑141 (MQ=255) aaaaGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGa < 2:758724/141‑1 (MQ=255) aaaGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGaa > 1:239035/1‑141 (MQ=255) ttttACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTAAAGAAAAAA‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGaa < 2:78505/141‑1 (MQ=255) tttACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGaaa > 1:600561/1‑141 (MQ=255) ttACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGaaaa > 2:1091220/1‑141 (MQ=255) ttACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGaaaa > 1:692982/1‑141 (MQ=255) ttACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGaaaa > 2:740837/1‑141 (MQ=255) tactatactaATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAAc > 2:1016515/1‑141 (MQ=255) tactatactaATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATATCTAATGTGGAGGTTAGAGTAGAAAACATAAAAAAAGAAATCAAAAAc > 1:1125536/1‑141 (MQ=255) actatactaATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACt < 1:583125/141‑1 (MQ=255) actataataAAGAAATAAAGACGGAGAAATACGAAGTAGCTCAGAATAAAC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACt < 2:1103115/141‑1 (MQ=255) aatactaATGAAATAAAGACGGAGAAATACGAAGTAGCTCAAAAAAAAA‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACttt < 2:729564/140‑1 (MQ=39) aataaaaaaaaaaTAAAGACGGAGAAATACGAAGTAGCTCAGGATAAAC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAAAAAAAAAAAAAAAAAAAGAAATCGAAAACttt < 2:93181/131‑1 (MQ=38) atactaATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTa > 2:868805/1‑141 (MQ=255) actaATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑‑AAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGt > 2:201457/1‑141 (MQ=255) aaTGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGttt < 2:988866/141‑1 (MQ=255) tGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGttttt < 2:71113/141‑1 (MQ=255) gAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGtttttt > 1:722445/1‑141 (MQ=255) gAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGtttttt > 1:658850/1‑141 (MQ=255) gAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑‑AAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGttttttt > 1:317224/1‑140 (MQ=255) aaTAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTgc > 1:177521/1‑141 (MQ=255) aaaGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTc > 1:37545/1‑73 (MQ=255) aaaGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTc < 2:37545/73‑1 (MQ=255) aaaGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCa > 2:1160943/1‑141 (MQ=255) aaaGACGGAGAAATACGAAGTAGCTCAGGAGAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCa > 2:1072901/1‑141 (MQ=255) aaGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTGAGTTTTTTGCGCaa > 2:317765/1‑141 (MQ=255) aaGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCaa > 2:200050/1‑141 (MQ=255) aaGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCaa < 2:334501/141‑1 (MQ=255) aCGGAGAAATACGAAGTAGCTCAGGATAATCAAAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAata < 1:73610/141‑1 (MQ=255) aCGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAatat > 1:595677/1‑141 (MQ=255) aCGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAatat > 1:1174412/1‑141 (MQ=255) ggAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAg < 2:601286/141‑1 (MQ=255) gagaAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGc < 1:1143703/141‑1 (MQ=255) gagaAATACGAAGTAGATCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGc < 2:1034705/141‑1 (MQ=255) aaaTACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGTAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAAt > 1:999403/1‑141 (MQ=255) aaaTACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAAt < 1:404844/141‑1 (MQ=255) aaaTACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAAt < 1:1095136/141‑1 (MQ=255) aaTACGAAGTAGCTCAGGATAATA‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAAtt < 2:1028112/141‑1 (MQ=255) aaTACGAAGTAGCTCAGGATAAAC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAAtt < 2:39980/141‑1 (MQ=255) tACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAAtttt > 2:823611/1‑141 (MQ=255) aCGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTa < 1:1004265/141‑1 (MQ=255) aCGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTa < 1:419395/141‑1 (MQ=255) aCGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTa < 1:610165/141‑1 (MQ=255) cGAAGTAGCTCAGGATAATC‑‑AAAAAAATATCCAGTTAAAAGGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTaaa > 1:871446/1‑141 (MQ=255) gAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTaaa > 1:488581/1‑141 (MQ=255) aaGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTATTGCGCAATATAGCAATTTTAAAg > 2:862548/1‑141 (MQ=255) gTAGCAAAGGATAAAA‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGAt < 1:429703/141‑1 (MQ=255) gCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTa > 2:803127/1‑141 (MQ=255) tCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAAt > 2:254085/1‑141 (MQ=255) cAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATg > 2:510242/1‑141 (MQ=255) cAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATg < 2:1170720/141‑1 (MQ=255) aaGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATg < 1:1193016/140‑1 (MQ=255) aGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGa > 2:402660/1‑141 (MQ=255) ggATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGaa < 1:170688/141‑1 (MQ=255) aTAAAC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAAtt < 2:941703/141‑1 (MQ=255) aaTC‑AAAAAAAATATCCAATTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTANAGATTTAATGAATtat < 1:964703/141‑1 (MQ=255) tC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGATTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATaa > 2:582058/1‑141 (MQ=255) | CAAATGGCAATTCAAAATAAAGGAGAAGCTCTAAAAATAAAAGGCATGCTTTTGAAGATAGATAGAAATACAAGAAGTGCAAAAGGATTTTACTATACTAATGAAATAAAGACGGAGAAATACGAAGTAGCTCAGGATAATC‑AAAAAAAATATCCAGTTAAAATGATTAATAATAAATTCATTTCTACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAA > CP000730/111189‑111469 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |