| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description | 
| RA | CP000730 | 328,487 | C→A | 8.6% | I210I (ATC→ATA) | USA300HOU_0294 → | hypothetical membrane protein | 
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 328,487 | 0 | C | A | 8.6% | 327.1 / 14.6 | 100 | I210I (ATC→ATA) | USA300HOU_0294 | hypothetical membrane protein | 
| Reads supporting (aligned to +/- strand): ref base C (45/46); new base A (4/5); total (49/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.49e-01 | |||||||||||
Only 100 of 105 total aligned reads displayed.
TATATAAGTCTAATAGTTCCTGTAACACAGCAAGAAGAGATTTTTATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCTATTTATTATATAGCTATGATTGCTAGTTTGTTTAAAAGTGAAGGTTTTTC  >  CP000730/328347‑328627                                                                                                                                            |                                                                                                                                            tatataAGTCTAATAGTTCCTGTAACACAGCAAGAAGAGATTTTTATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATc                                                                                                                                              <  1:430625/141‑1 (MQ=255)tatataAGTCTAATAGTTCCTGTAACACAGCAAGAAGAGATTTTTATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATc                                                                                                                                              <  1:426021/141‑1 (MQ=255) atataAGTCTAATAGTTCCTGTAACACAGCAAGAAGAGATTTTTATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCg                                                                                                                                             <  2:104060/141‑1 (MQ=255) atataAGTCTAATAGTTCCTGTAACACAGCAAGAAGAGATTTTTATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCg                                                                                                                                             <  2:260529/141‑1 (MQ=255)    taAGTCTAATAGTTCCTGTAACACAGCAAGAAGAGATTTTTATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGaaa                                                                                                                                          <  2:1090563/141‑1 (MQ=255)     aaGTCTAATAGTTCCTGTAACACAGCAAGAAGAGATTTTTATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGaaaa                                                                                                                                         <  2:830170/141‑1 (MQ=255)     aaGTCTAATAGTTCCTGTAACACAGCAAGAAGAGATTTTTATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGaaaa                                                                                                                                         <  2:103649/141‑1 (MQ=255)      aGTCTAATAGTTCCTGTAACACAGCAAGAAGAGATTTTTATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAAt                                                                                                                                        >  2:1024946/1‑141 (MQ=255)       gTCTAATAGTTCCTGTAACACAGCAAGAAGAGATTTTTATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATg                                                                                                                                       <  1:18541/141‑1 (MQ=255)           aaTAGTTCCTGTAACACAGCAAGAAGAGATTTTTATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAgg                                                                                                                                   >  2:667180/1‑141 (MQ=255)                ttCCTGTAACACAGCAAGAAGAGATTTTTATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGa                                                                                                                              <  1:855120/141‑1 (MQ=255)                 tCCTGTAACACAGCAAGAAGAGATTTTTATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGAc                                                                                                                             >  2:165588/1‑141 (MQ=255)                 tCCTGTAACACAGCAAGAAGAGATTTTTATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGAc                                                                                                                             >  1:306247/1‑141 (MQ=255)                  ccTGTAACACAGCAAGAAGAGATTTTTATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACa                                                                                                                            >  2:842838/1‑141 (MQ=255)                   cTGTAACACAGCAAGAAGAGATTTTTATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACaa                                                                                                                           >  2:184510/1‑141 (MQ=255)                   cTGTAACACAGCAAGAAGAGATTTTTATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATAGAAAATGAAGGTAAGACaa                                                                                                                           >  1:192991/1‑141 (MQ=255)                    tGTAACACAGCAAGAAGAGATTTTTATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAAt                                                                                                                          <  1:1159933/141‑1 (MQ=255)                           caGCAAGAAGAGATTTTTATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAgg                                                                                                                   <  2:925224/141‑1 (MQ=255)                              cAAGAAGAGATTTTTATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGaaa                                                                                                                >  2:37309/1‑141 (MQ=255)                                  aagaGATTTTTATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACa                                                                                                            >  2:568814/1‑141 (MQ=255)                                  aagaGATTTTTATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACa                                                                                                            <  2:1184409/141‑1 (MQ=255)                                     tgaTTTTTATAGGGTTAAGTTTATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATaa                                                                                                         <  1:10015/140‑1 (MQ=255)                                     agaTTTTTATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATaa                                                                                                         >  2:2667/1‑141 (MQ=255)                                     agaTTTTTATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATaa                                                                                                         >  1:96323/1‑141 (MQ=255)                                      gaTTTTTATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATaaa                                                                                                        >  2:923758/1‑141 (MQ=255)                                          tttATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAaat                                                                                                    <  2:1162181/141‑1 (MQ=255)                                            tataGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAaataa                                                                                                  >  1:1100074/1‑141 (MQ=255)                                            tataGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAaataa                                                                                                  >  1:1100008/1‑141 (MQ=255)                                              taGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTACTTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAataata                                                                                                <  1:297532/141‑1 (MQ=255)                                              taGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAataata                                                                                                <  1:1057092/141‑1 (MQ=255)                                                gggTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAgg                                                                                              >  1:621359/1‑141 (MQ=255)                                                  gTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAg                                                                                            >  2:70533/1‑141 (MQ=255)                                                  gTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAg                                                                                            >  2:803225/1‑141 (MQ=255)                                                   ttAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGt                                                                                           >  2:88918/1‑141 (MQ=255)                                                   ttAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGt                                                                                           <  2:58900/141‑1 (MQ=255)                                                         atatTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAAcc                                                                                     <  1:735383/141‑1 (MQ=255)                                                          tatTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCa                                                                                    >  2:806271/1‑141 (MQ=255)                                                          tatTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCa                                                                                    >  2:211280/1‑141 (MQ=255)                                                           atTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATAGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTGTAACCAt                                                                                   <  1:946267/141‑1 (MQ=255)                                                            ttgatgaaTATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTGACCATg                                                                                  >  2:104288/7‑141 (MQ=255)                                                            ttCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATg                                                                                  >  1:25416/1‑141 (MQ=255)                                                             tcatcaATATAATTGTTGATTCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATAGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGa                                                                                 <  2:1100892/141‑1 (MQ=255)                                                             tcatcaATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATACGAGTATTAAGAAAGATATCGAAAATGAAGGTAACACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGa                                                                                 <  1:254920/141‑1 (MQ=255)                                                                tcaATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATaa                                                                              <  2:1133461/141‑1 (MQ=255)                                                                 caATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAAt                                                                             >  1:115559/1‑141 (MQ=255)                                                                  aaTATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGGTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAAtt                                                                            <  1:134004/141‑1 (MQ=255)                                                                   atatAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAAttt                                                                           <  1:2462/141‑1 (MQ=255)                                                                    tataATTGTTTATGATCTTTTTGTTAGGTCATATTTTAAATGCGCGTTATATAAGAGTATTAAGAAAGATAACGAAAAGGAAGGTAAGCCAATGTAAAAAAAAAAAAAAAAAAATAATAGGAGTCTAACCATGATAAtttt                                                                          <  2:94205/141‑1 (MQ=255)                                                                    tataATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAAtttt                                                                          >  1:691277/1‑141 (MQ=255)                                                                    tataATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAACGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAAtttt                                                                          >  2:928025/1‑141 (MQ=255)                                                                    tataATGGTTGATGCGCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAAtttt                                                                          <  1:441569/141‑1 (MQ=255)                                                                      taATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATtttta                                                                        >  2:1118810/1‑141 (MQ=255)                                                                          tgttgATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATttttatttt                                                                    <  1:400377/141‑1 (MQ=255)                                                                             tgATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAAAGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTtaaa                                                                 >  2:575788/1‑140 (MQ=255)                                                                              gATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTtaata                                                                <  1:477519/141‑1 (MQ=255)                                                                                tGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAAc                                                              >  2:201017/1‑141 (MQ=255)                                                                                tGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATAGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAAc                                                              <  1:1158341/141‑1 (MQ=255)                                                                                 gCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACa                                                             <  2:58398/141‑1 (MQ=255)                                                                                 gCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACa                                                             >  1:177469/1‑141 (MQ=255)                                                                                   tcttctTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAat                                                           >  2:766543/1‑141 (MQ=255)                                                                                      tcttGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATAtt                                                        <  1:334976/141‑1 (MQ=255)                                                                                       cttGTTAGGTCATATTTTAATTACGTGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATAttt                                                       <  1:667969/141‑1 (MQ=255)                                                                                       cttGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATAttt                                                       >  1:537669/1‑141 (MQ=255)                                                                                        ttGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTg                                                      <  1:184510/141‑1 (MQ=255)                                                                                        ttGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTg                                                      <  1:302053/141‑1 (MQ=255)                                                                                         tGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATAGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGc                                                     <  2:1110160/141‑1 (MQ=255)                                                                                         tGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATGAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGc                                                     <  1:881357/141‑1 (MQ=255)                                                                                          gTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCt                                                    >  2:957527/1‑141 (MQ=255)                                                                                          gTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCt                                                    >  1:731816/1‑141 (MQ=255)                                                                                           ttAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCta                                                   >  1:98885/1‑141 (MQ=255)                                                                                            tAGGTCATATTTTTATTACGCGTAATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTATGACAATGTAAAGGAAAGACACAATAAATAGTACGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCtat                                                  <  2:214516/141‑1 (MQ=255)                                                                                              ggTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCtattt                                                <  1:752990/141‑1 (MQ=255)                                                                                              ggTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCtattt                                                >  1:413900/1‑141 (MQ=255)                                                                                                 cATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATAGAAACTGACGATAAGGCTTTATTTATTAAAGAAAATAAAATGAATATGATGCTAACCATGATAATTTTTATTTTAATAACAATATTTGCtatttatt                                             >  1:236624/1‑141 (MQ=255)                                                                                                     ttttAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCTATTTATtatat                                         <  2:243586/141‑1 (MQ=255)                                                                                                      tttAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCTATTTATtatata                                        >  2:252027/1‑141 (MQ=255)                                                                                                        tAATTACGCGTTGTACAAGACTATGCAGAAAGATATCGAAACTGAAGGTAAGACAGTGTATAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTCATAACACTATTTGCTATTTCTtatacacc                                      >  2:925711/1‑137 (MQ=255)                                                                                                        tAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCTATTTATTATATAGc                                      <  1:883735/141‑1 (MQ=255)                                                                                                         aaTTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCTATTTATTATATAGCt                                     >  1:33720/1‑141 (MQ=255)                                                                                                              cgcgTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCTATTTATTATATAGCTATGAt                                >  1:477960/1‑141 (MQ=255)                                                                                                                 gTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCTATTTATTATATAGCTATGATTGc                             <  1:644847/141‑1 (MQ=255)                                                                                                                  ttATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCTATTTATTATATAGCTATGATTGCt                            >  1:131303/1‑141 (MQ=255)                                                                                                                        aaGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCTATTTATTATATAGCTATGATTGCTAgtttg                      >  1:518288/1‑141 (MQ=255)                                                                                                                        aaGAGTATTAAGAAAGATATAGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCTATTTATTATATAGCTATGATTGCTAgtttg                      >  1:1056450/1‑141 (MQ=255)                                                                                                                            gTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCTATTTATTATATAGCTATGATTGCTAGTTTGTTTa                  <  1:299261/141‑1 (MQ=255)                                                                                                                               ttAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTTTTTTTTTTTCAATATTTGCTATTTATTATATAGCTATGATTGCTAGTTTGTTTaaaa               >  2:577337/1‑141 (MQ=255)                                                                                                                                 aagaaagaTATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGAt                                                                                >  1:260079/1‑74 (MQ=255)                                                                                                                                 aagaaagaTATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGAt                                                                                <  2:260079/74‑1 (MQ=255)                                                                                                                                 aagaaagaTATAGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCTATTTATTATATAGCTATGATTGCTAGTTTGTTTAAAAGt             >  2:274788/1‑141 (MQ=255)                                                                                                                                  agaaagaTATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAATACATAATAGCCGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCTATTTATTATATAGCTATGATTGCTAGTTTGTTTAAAAGTg            <  1:112848/141‑1 (MQ=255)                                                                                                                                  agaaagaTATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCTATTTATTATATAGCTATGATTGCTAGTTTGTTTAAAAGTg            >  2:218602/1‑141 (MQ=255)                                                                                                                                   gaaagaTATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCTATTTATTATATAGCTATGATTGCTAGTTTGTTTAAAAGTGa           <  2:30931/141‑1 (MQ=255)                                                                                                                                      agaTATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTGACCATGATAATTTTTATTTTAATAACAATATTTGCTATTTATTATATAGCTATGATTGCTAGTTTGTTTAAAAGTGAAgg        <  1:104288/141‑1 (MQ=255)                                                                                                                                        atatCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCTATTTATTATATAGCTATGATTGCTAGTTTGTTTAAAAGTGAAGGtt      >  1:269605/1‑141 (MQ=255)                                                                                                                                         tatCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCTATTTATTATATAGCTATGATTGCTAGTTTGTTTAAAAGTGAAGGttt     <  1:1178650/141‑1 (MQ=255)                                                                                                                                          atCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCTATTTATTATATAGCTATGATTGCTAGTTTGTTTAAAAGTGAAGGtttt    <  2:115559/141‑1 (MQ=255)                                                                                                                                           tCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCTATTTATTATATAGCTATGATTGCTAGTTTGTTTAAAAGTGAAGGttttt   <  2:1064371/141‑1 (MQ=255)                                                                                                                                           tCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCTATTTATTATATAGCTATGATTGCTAGTTTGTTTAAAAGTGAAGGttttt   >  2:595976/1‑141 (MQ=255)                                                                                                                                            cGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCTATTTATTATATAGCTATGATTGCTAGTTTGTTTAAAAGTGAAGGTTTTTc  <  1:13883/141‑1 (MQ=255)                                                                                                                                            cGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCTATTTATTATATAGCTATGATTGCTAGTTTGTTTAAAAGTGAAGGTTTTTc  >  1:275006/1‑141 (MQ=255)                                                                                                                                            |                                                                                                                                            TATATAAGTCTAATAGTTCCTGTAACACAGCAAGAAGAGATTTTTATAGGGTTAAGTATATTCATCAATATAATTGTTGATGCTCTTCTTGTTAGGTCATATTTTAATTACGCGTTATATAAGAGTATTAAGAAAGATATCGAAAATGAAGGTAAGACAATGTAAAGGAAAGACATAAAAAATAATAGGAGTCTAACCATGATAATTTTTATTTTAATAACAATATTTGCTATTTATTATATAGCTATGATTGCTAGTTTGTTTAAAAGTGAAGGTTTTTC  >  CP000730/328347‑328627 | 
| Alignment Legend | 
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG | 
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑ |