Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 622,464 G→A 11.8% S1009S (TCG→TCA)  sdrE → Ser‑Asp rich fibrinogen/bone sialoprotein‑binding protein SdrE

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP000730622,4640GA11.8% 267.1 / 6.2 116S1009S (TCG→TCA) sdrESer‑Asp rich fibrinogen/bone sialoprotein‑binding protein SdrE
Reads supporting (aligned to +/- strand):  ref base G (44/53);  new base A (9/6);  total (55/61)
Fisher's exact test for biased strand distribution p-value = 4.06e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 118 total aligned reads displayed.

GTGATTCAGATTCAGACAGCGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGTGA  >  CP000730/622331‑622604
                                                                                                                                     |                                                                                                                                            
gcgatacagattcaGACAGCGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAg                                                                                                                                       <  2:939453/139‑1 (MQ=255)
gTGATTCAGATTCAGACAGCGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAg                                                                                                                                       >  1:905293/1‑141 (MQ=255)
 tGATTCAGATTCAGACAGCGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGa                                                                                                                                      <  1:170741/141‑1 (MQ=255)
   attcagattcagACAGCGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAACGACTCTGATTCAGATAGCGATTCGGACTCAGACa                                                                                                                                    <  2:950858/141‑1 (MQ=255)
    ttcagatgcagaCAGCGACGCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAg                                                                                                                                   <  2:470529/141‑1 (MQ=255)
     tcagattcagaCAGCGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACTCAGACAGCGACTCAGACGCAGATAGCGGCTCAGACTCAGACAgg                                                                                                                                  >  2:387311/1‑140 (MQ=14)
      cagattcagaCAGCGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGATTCAGACACAGACAGCGACTCAGATGCAGAAAGCGATACAGCCGCCGACAGCg                                                                                                                                 >  2:767175/1‑141 (MQ=14)
       agattcagaCAGCGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGa                                                                                                                                <  1:96858/141‑1 (MQ=255)
          ttcagaCAGCGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGactc                                                                                                                             <  1:1188255/141‑4 (MQ=11)
           tcagaCAGCGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGATTCAGACTCAGATAGAGACTCAGATTCAGATAGCGATTCAGACGCAGACAgagagaca                                                                                                                            >  2:1061828/1‑137 (MQ=11)
            cagaCAGCGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAg                                                                                                                           >  1:476483/1‑141 (MQ=255)
            cagaCAGCGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAg                                                                                                                           <  1:755767/141‑1 (MQ=255)
             agaCAGCGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCGGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGATTCAGa                                                                                                                          >  1:595652/1‑141 (MQ=255)
              gaCAGCGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAACGACTCAGATTCAGATAGCGAttcagattcagatgcaggtaaacat                                                                                                                         >  1:756491/1‑128 (MQ=11)
                  gCGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGACAGCGATTCAGACTCAGACAGCGactcagactcag                                                                                                                     >  2:88784/1‑141 (MQ=255)
                  gCGACACAGATTCAGATAGCGACTCAGACTCCGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAg                                                                                                                     <  2:209556/141‑1 (MQ=255)
                   cGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCTATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGa                                                                                                                    <  1:1108540/141‑1 (MQ=255)
                   cGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGa                                                                                                                    <  2:506568/141‑1 (MQ=255)
                      cTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCCGACAGCGATTCAGACTCAGATAg                                                                                                                 >  1:627566/1‑141 (MQ=255)
                      cTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAg                                                                                                                 >  1:345121/1‑141 (MQ=255)
                       tcagattcagatAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGc                                                                                                                >  1:826155/1‑141 (MQ=255)
                       tcagattcagatAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGATAGCGATTCAGACTCAGACAGCGACTCAGACTCAGATAGCGAGTCGGACTCAGACAGCGAGTCAGACTCAGATAGc                                                                                                                >  2:1044799/1‑141 (MQ=255)
                       tcagattcagatAGCGACTCAGATTCGGACAGCGACTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGACTCTGATAGc                                                                                                                >  2:487024/1‑141 (MQ=255)
                        cagattcagatAGCGACTCAGATTCGGACAGCGACTCAGACTCAGATAGCGACTCAGACTCAGACAGCGATTCAGACTCAGACAGAGACTCAGATTCAGAAAGCGATACAGACGCAGAAAGCGAGTCAGACACAGAAAGcc                                                                                                               >  2:910409/1‑140 (MQ=11)
                          gattcagatAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCgac                                                                                                             <  1:144129/141‑1 (MQ=255)
                              cagatAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCgactcag                                                                                                         >  1:1065127/1‑141 (MQ=255)
                               agatAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCgactcaga                                                                                                        <  2:22090/141‑1 (MQ=255)
                               agatAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCgactcaga                                                                                                        >  1:1190783/1‑141 (MQ=255)
                                gatAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACAGAGACAGCGACTCAGATTCAGAGAGCGATTCAGACTCAGGACGCGAGTCAGACGCAGCGAGAgacgcaggc                                                                                                       >  2:400334/1‑139 (MQ=11)
                                     cGACTCAGATTCGTACAGCGATTCACACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGAttcagactcaga                                                                                                  <  2:11963/141‑1 (MQ=255)
                                      gtcTCAGAATCAGATAGCGATTCAGAATCAGAGAGCGACTCAGATCCAGATAGCGATTCAGATTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACtcagactcagac                                                                                                 <  2:448289/139‑1 (MQ=11)
                                      gACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGTACTCAGACAGCGATTCAGACTCAGATAGCGACtcagactcagac                                                                                                 <  1:1137425/141‑1 (MQ=255)
                                      gACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACtcagactcagac                                                                                                 <  1:601783/141‑1 (MQ=255)
                                        cgctgaggacgagggCGATTACGGCTCAGAAGCCGTCTGAGATTCCGACAGCGAGTCAGGTTCAGACAGCGACTCAGATTCAGACAGCGATCGGGAGTCAGACAGCGATTCTGACTCAGATAGCGACTCAGACTCAGACAg                                                                                               <  2:943176/127‑1 (MQ=2)
                                        atCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAg                                                                                               <  2:389719/140‑1 (MQ=255)
                                          cAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCg                                                                                             >  1:196242/1‑141 (MQ=255)
                                           gggttCGGCCACCGTATCAGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGACTGCGACTCAGATTCAGATTGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGa                                                                                            <  2:3623/138‑1 (MQ=14)
                                           aGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGa                                                                                            <  1:764735/141‑1 (MQ=255)
                                              ttCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACtc                                                                                         >  2:110801/1‑141 (MQ=255)
                                              ttCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACtc                                                                                         <  1:404810/141‑1 (MQ=255)
                                              tgcGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCCGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACtc                                                                                         <  1:1077592/139‑1 (MQ=255)
                                                cagACAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACtcag                                                                                       <  2:82402/139‑1 (MQ=255)
                                                cGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACtcag                                                                                       <  1:1051770/141‑1 (MQ=255)
                                                cGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACtcag                                                                                       >  2:778804/1‑141 (MQ=255)
                                                  gagggcgatggggACGCAGGTAGCGACGCAGATTGAGATAGCGATGCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACtcagat                                                                                     <  2:1191417/129‑1 (MQ=14)
                                                  gACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACtcagat                                                                                     >  1:1123107/1‑141 (MQ=255)
                                                  gACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGACTCAGATAGCGACTCAGATTCAGATAGC‑‑‑‑‑‑GACTCAGACAGCGACTCAGACTCAGATAGAGATGCAGACTCAGACAGCGACacagactcagac                                                                               >  2:777602/1‑140 (MQ=11)
                                                    cAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGCAGCGGACGCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACtcagagtc                                                                                   >  1:21054/1‑141 (MQ=14)
                                                      gCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACtcagattcag                                                                                 >  1:556580/1‑141 (MQ=255)
                                                      gCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGACTCAGACTCAGATAGCGACTCAGACTCAGACAGCGactcagactcag                                                                                 >  2:326109/1‑141 (MQ=255)
                                                      gCGATTCAGACTCAGATAGCGACTCAGACTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGACAGCGACTCAGAATCAGACAGCGACtcagcttcgg                                                                                 >  1:556574/1‑139 (MQ=255)
                                                           tcagactcagacAGCGACTCAGATTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGc                                                                            <  2:1176409/141‑1 (MQ=255)
                                                           tCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGACTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGc                                                                            >  2:436237/1‑141 (MQ=255)
                                                           tCAGACTCAGATAGCGACTCAGATGCAGATAGCGATTCAGACTCAGACAGCGCCTCAGATTCAGATAGCGATTCGGACTCAGCCAGCGATTCCGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGc                                                                            <  1:979579/141‑1 (MQ=255)
                                                                  cAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACCCAGACAGTGATTCGGATTCAGCGAGTGATTCgg                                                                     <  2:1124207/141‑1 (MQ=11)
                                                                   tatctgaatcTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGa                                                                    <  2:30660/132‑1 (MQ=255)
                                                                   aGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGACAGCGATTCGGACTCAGACAGCGACTCAGACTCAGACAGCGATTCAGACTCAGACAGCGACTCAGACTCAGATAGCGAGTCAGa                                                                    >  2:741951/1‑141 (MQ=11)
                                                                    gATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGAc                                                                   <  1:1063237/141‑1 (MQ=255)
                                                                    gATAGCGACTCAGATTCAGAGAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGAc                                                                   <  1:1133533/141‑1 (MQ=255)
                                                                      tAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTc                                                                 <  1:334841/141‑1 (MQ=255)
                                                                      tAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTc                                                                 >  1:648331/1‑141 (MQ=255)
                                                                      tAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCAGACTc                                                                 >  2:507027/1‑141 (MQ=255)
                                                                      aagcaacaaagatacagaaAGCGACTCAGAGTCAGAAAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGACTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTc                                                                 <  2:268270/132‑1 (MQ=11)
                                                                      aaGCGACTCAGATTCAGACAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTc                                                                 <  2:12511/140‑1 (MQ=255)
                                                                       aGCGACTCAGATTCAGATAGCGCCTCAGCCGCAGACAGCGACTCAGATTCAGACAGCGATTCCGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGAGACTCAGATACAGAGAGCGACTCGGACTCa                                                                >  2:542608/1‑141 (MQ=14)
                                                                          gACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGAt                                                             <  1:906299/141‑1 (MQ=255)
                                                                            cTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAg                                                           <  1:1087574/141‑1 (MQ=255)
                                                                            cTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAg                                                           >  1:820356/1‑141 (MQ=255)
                                                                            cTCAGATTCAGATAGCGAGCCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAg                                                           <  2:441410/141‑1 (MQ=255)
                                                                               agattcagatAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGa                                                        <  2:240181/141‑1 (MQ=255)
                                                                                gattcagatAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGAc                                                       >  1:421084/1‑141 (MQ=255)
                                                                                 attcagatAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACt                                                      <  1:132415/141‑1 (MQ=255)
                                                                                  ttcagatAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTc                                                     >  1:1175523/1‑141 (MQ=255)
                                                                                   tcagatAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCa                                                    >  1:86064/1‑141 (MQ=255)
                                                                                    cagatAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAg                                                   <  1:1162300/141‑1 (MQ=255)
                                                                                     agatAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGa                                                  >  1:935597/1‑141 (MQ=255)
                                                                                      gatAGCGATTCAGACTCAGACGGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGCGAGTCGGACTCAGAGAGCGACTCAGaa                                                 >  2:438781/1‑140 (MQ=255)
                                                                                              ttCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGACAg                                         <  1:3956/141‑1 (MQ=255)
                                                                                              cacagactcagtcTGCGACTCAGATTCAGATAGCGACTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCTATTCGGACTCAGATAGCGACTCAGATTCAGACAg                                         <  2:174752/139‑1 (MQ=255)
                                                                                                  gatgaagacAGCGAACCAGATACAGATAGCGATGCAGACGATGCAAGAGACTGAGATTCAGACACAGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGACAGCGAt                                     <  1:1103461/136‑1 (MQ=2)
                                                                                                  gactcagacAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGACAGCGAt                                     >  1:130582/1‑141 (MQ=255)
                                                                                                    ctcagacAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGACAGCGATTc                                   >  1:1185325/1‑141 (MQ=255)
                                                                                                      cagacAGCGACTAAGATTCAGATAGCGATACAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGACAGCGATTCAg                                 <  2:1093131/141‑1 (MQ=255)
                                                                                                       agacAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGACTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGACTCAGAAAGCGACTCAGa                                >  2:1141525/1‑141 (MQ=11)
                                                                                                       agacAGCGACTCAGATTCAGACAGCGATTCGGACTCAGACAGCGATTCAGACTCAGACAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGACAGCGATTCAGa                                <  2:811025/141‑1 (MQ=255)
                                                                                                        gtcAGCGACTCAGATTCAGATAGCGATTCTGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGACAGCGATTCAGAc                               <  2:1082061/139‑1 (MQ=255)
                                                                                                        gacAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGACAGCGATTCAGAc                               <  2:694147/141‑1 (MQ=255)
                                                                                                            gCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACTCAg                           >  1:545944/1‑141 (MQ=255)
                                                                                                            gCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGactcagactcag                           >  2:513621/1‑141 (MQ=255)
                                                                                                              gACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACTCAGAt                         >  1:316017/1‑141 (MQ=255)
                                                                                                              gACTCAGATTCAGACAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACTCAGAt                         <  2:158939/141‑1 (MQ=255)
                                                                                                                 tcagattcagatAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGAt                                                                         <  2:583061/90‑1 (MQ=255)
                                                                                                                 tcagattcagatAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGAt                                                                         >  1:583061/1‑90 (MQ=255)
                                                                                                                  cagattcagatAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGACTCGGATAGCg                     <  2:648331/141‑1 (MQ=255)
                                                                                                                    gattcagatAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACTCAGATAGCgac                   >  2:1052521/1‑141 (MQ=255)
                                                                                                                    gattcagagAGCGATTCGGACTCAGACAGCGATTCAGACTCAGACAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACTCAGATAGCgac                   <  1:1019137/141‑1 (MQ=255)
                                                                                                                      ttcagacAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACTCAGATAGCgactc                 <  1:1007668/141‑1 (MQ=255)
                                                                                                                                  ttCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAg     <  2:826155/141‑1 (MQ=255)
                                                                                                                                   tCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGt    >  1:354289/1‑141 (MQ=255)
                                                                                                                                     ggACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGTga  <  2:556580/141‑1 (MQ=255)
                                                                                                                                     |                                                                                                                                            
GTGATTCAGATTCAGACAGCGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGACAGTGA  >  CP000730/622331‑622604

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑