| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description | 
| RA | CP000730 | 76,265 | C→T | 34.7% | intergenic (+323/‑811) | USA300HOU_0072 → / → USA300HOU_0075 | universal stress protein/lysophospholipase | 
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 76,265 | 0 | C | T | 34.7% | 189.2 / 191.0 | 220 | intergenic (+323/‑811) | USA300HOU_0072/USA300HOU_0075 | universal stress protein/lysophospholipase | 
| Reads supporting (aligned to +/- strand): ref base C (83/60); new base T (43/33); total (127/93) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.54e-01 | |||||||||||
Only 100 of 220 total aligned reads displayed.
CAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAG  >  CP000730/76129‑76403                                                                                                                                        |                                                                                                                                            aatgaagtTAACAACGATAGAAAAAAAAAGGTTCTTTTGCAAAGTTGAATCTATAGTAAAAAAAAAAAAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTgg                                                                                                                                        <  2:196424/141‑1 (MQ=11)          aataatTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCt                                                                                                                               >  2:335496/1‑141 (MQ=255)                      gtaaatgaGGTTCTGTTGCAAAGTTGAATTTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCAtt                                                                                                                   <  2:237635/134‑1 (MQ=255)                      gtaaatgaGGTTCTGTTGCAAAGTTGAATTTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATAGAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCAtt                                                                                                                   <  1:51004/134‑1 (MQ=11)                       gttagaaGGTTCTTTTGCAAAGTTGAATTTATAATATAATTAAAAACAAAAGTAATCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTg                                                                                                                  <  2:145906/135‑1 (MQ=11)                        aaTAGAGGTTCTGGTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGCGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGa                                                                                                                 <  2:262436/141‑1 (MQ=255)                         aatgaGGTTCTGTTGCAAAGTTGAATTTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAg                                                                                                                <  1:333272/137‑1 (MQ=2)                           tgaGGTTCTGTTGCAAAGTTGCATTTATAGTATAATTTTAAACAATAGAAGAGTTCCGTACAAACTATTTCAGATATAAACATTTTAACAATGATTTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGtt                                                                                                              <  2:359269/139‑1 (MQ=11)                           ataGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAAAAAGGAGGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTgcggt                                                                                                              >  1:134857/1‑137 (MQ=255)                            gaGGTTCTGTTGCAAAGTTGAATTTATAATATAATCTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAgctc                                                                                                             >  2:66066/2‑138 (MQ=255)                             aGGTTCTGTTGCAAAGTTGAATTTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATTTTGGGCATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTAt                                                                                                            >  1:271527/1‑141 (MQ=1)                                        gaaaGTTGAATTTATAATATAATTTTAACAAAAAGGAGTCTTTTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATc                                                                                                 <  2:112078/140‑1 (MQ=255)                                        cAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATc                                                                                                 >  1:128590/1‑141 (MQ=35)                                            agtGAATCTATAGTAAAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTGGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGaa                                                                                             <  1:290331/139‑1 (MQ=255)                                               tgttCTGTAGTATAATTTTAACAAAAAGGAGGCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTGTCACTGTAGCCGTTGGCTACTATCTAAGATATGCGTTGAGTTATCGTGATATATCTGAAata                                                                                          >  2:3970/4‑141 (MQ=11)                                                         tataATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGCTTTAAACAATTTAACAAGGATGTTCAACCGGGAGCCGTTGCCCTCAATTTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAAc                                                                                <  1:87723/141‑1 (MQ=11)                                                             aTTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACgtg‑g                                                                           <  1:117299/141‑1 (MQ=12)                                                              ttttAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACatg‑gt                                                                          >  1:206246/1‑141 (MQ=12)                                                              ttttAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGAACAAAAAAACTAAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACgtg‑gt                                                                          <  1:121091/141‑1 (MQ=11)                                                                ttAACAAAAAGGGGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑gtgt                                                                        <  2:107521/141‑1 (MQ=12)                                                                ttAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑gtgt                                                                        <  1:310058/141‑1 (MQ=17)                                                                tcaaCAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACCGTAGCTGTTGGCTACCATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑gtgt                                                                        <  1:191513/139‑1 (MQ=255)                                                                    cAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAAc                                                                    >  2:28773/1‑141 (MQ=17)                                                                    aaaaaaGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAAc                                                                    <  2:284906/140‑1 (MQ=12)                                                                     aaaaaGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACg                                                                   <  2:132959/141‑1 (MQ=17)                                                                     aaaaaGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACg                                                                   <  1:255967/141‑1 (MQ=12)                                                                     aaaaaGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACg                                                                   <  1:160928/141‑1 (MQ=17)                                                                       aaaGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGtt                                                                 >  1:73529/1‑141 (MQ=17)                                                                         aGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTtca                                                               >  1:260038/1‑141 (MQ=17)                                                                         aGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTtca                                                               <  2:49281/141‑1 (MQ=17)                                                                           gAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGTTGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATAACTGAAATATTAAGAGGACGTG‑GTGTAGACGTtcatc                                                             >  2:188712/1‑141 (MQ=11)                                                                           gAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTtcatc                                                             >  2:210508/1‑141 (MQ=17)                                                                           gAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTTAGATAACGTG‑GTGTAAACGTtcatc                                                             <  2:264711/141‑1 (MQ=255)                                                                            aGTCTTCTGTATGAACTATTTCAGATATAATCAGTTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTtcatca                                                            >  2:343205/1‑141 (MQ=12)                                                                            aGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTtcatca                                                            >  1:370462/1‑141 (MQ=32)                                                                             gTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGGCTGTGCGAGAGAACTGAAATATTAAGGGAACGTG‑GTGTAAACGTTcatcat                                                           >  1:84621/1‑141 (MQ=11)                                                                             gTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTcatcat                                                           >  1:130731/1‑141 (MQ=17)                                                                             gTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTcatcat                                                           >  1:171190/1‑141 (MQ=12)                                                                             gTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGCTcatcat                                                           >  2:200650/1‑141 (MQ=12)                                                                             gTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑CTGTAAACGTTcatcat                                                           >  2:268382/1‑141 (MQ=12)                                                                             gTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTACCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACATTcatcat                                                           >  2:260914/1‑141 (MQ=255)                                                                              tcttctGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCAtt                                                          <  2:47172/141‑1 (MQ=17)                                                                              tcttctGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTAATCAtt                                                          <  2:90476/141‑1 (MQ=17)                                                                               cttctGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTc                                                         >  2:101219/1‑141 (MQ=17)                                                                               cttctGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTc                                                         <  1:109016/141‑1 (MQ=17)                                                                                ttctGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAGACGTTCATCATTCa                                                        >  2:364287/1‑141 (MQ=12)                                                                                    gTATGAATTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACga                                                    <  1:28499/141‑2 (MQ=12)                                                                                    gTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACgg                                                    <  2:22444/141‑1 (MQ=32)                                                                                      aTGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACgatc                                                  <  1:51947/141‑4 (MQ=255)                                                                                       tgcaCTATTTCAGATATAAACAAGTTAACAAGGATGTTAGCACTTTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCt                                                 <  2:12903/138‑1 (MQ=11)                                                                                       tGAACTATTTCAGATCTAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTACGATATGCATTGAGGTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAAAGTTCATCATTCAACGGTCt                                                 >  2:213949/1‑141 (MQ=11)                                                                                       tGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCt                                                 <  2:136146/141‑1 (MQ=255)                                                                                          aCTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTAcc                                              <  1:97905/141‑1 (MQ=17)                                                                                          aCTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTAcc                                              >  1:60671/1‑141 (MQ=12)                                                                                          aCTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTAcc                                              >  1:213637/1‑141 (MQ=12)                                                                                           cTATTTCAGCTATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATCTGCATTGAGTTATCGTGATATGACTGAATGATTAGGGCGACGTG‑GTGTTGACGTTCCTCATTGCACGGTCTTCCg                                             >  2:292637/1‑141 (MQ=11)                                                                                            tATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGt                                            <  2:272632/141‑1 (MQ=32)                                                                                             aTTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGtt                                           >  1:356484/1‑141 (MQ=17)                                                                                                tCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTggg                                        <  1:291983/141‑1 (MQ=12)                                                                                                 cAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATGATTCAAGGATCTACCGTTGGGt                                       >  2:197192/1‑141 (MQ=11)                                                                                                  aGATCTAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTCCATCATTCAACGATCTACCGTTGGGtt                                      <  1:194941/141‑1 (MQ=11)                                                                                                  aGATATAAACAATTTACCAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGtt                                      >  2:171932/1‑141 (MQ=11)                                                                                                  aGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGtt                                      <  1:116124/141‑1 (MQ=255)                                                                                                   gATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAACTATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTc                                     >  2:165617/1‑141 (MQ=17)                                                                                                   gATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTc                                     <  1:234082/141‑1 (MQ=255)                                                                                                   gATATAAACAATTTAACAAGGATGTTATCACTGCAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCAGAAATAGTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTc                                     >  2:246389/1‑141 (MQ=11)                                                                                                       taAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGa                                 >  1:66343/1‑141 (MQ=17)                                                                                                       taAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGa                                 <  2:305998/141‑1 (MQ=17)                                                                                                       taAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGa                                 >  1:146869/1‑141 (MQ=17)                                                                                                       taAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGa                                 <  2:159781/141‑1 (MQ=17)                                                                                                         aaCAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAat                               <  2:54938/141‑1 (MQ=32)                                                                                                            aaTTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATg                            <  1:137732/141‑1 (MQ=17)                                                                                                              tttAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACTATCTACCGTTGGGTTCAAGAATATGcc                          <  2:3467/141‑1 (MQ=255)                                                                                                               ttAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGccc                         >  2:83311/1‑141 (MQ=255)                                                                                                                 aaCAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCa                       >  1:281408/1‑141 (MQ=17)                                                                                                                 aaCAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTAATCCTTCAACGGTCTACCGTTGGGTTCAAGAATGTGCCCCa                       >  2:8626/1‑141 (MQ=12)                                                                                                                  aCAAGGGTGTTCTCACTGTAGCGGTTGGCTACTATCTAAGTTATGCATGGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCaa                      >  2:370948/1‑141 (MQ=11)                                                                                                                  aCAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAAAATTAAGGGAACGTG‑GTGTAAACGTTCAGCATTAAACGGTCTACGGTTGGTGTCAAGATTATGCCCCaa                      >  2:72824/1‑141 (MQ=11)                                                                                                                  aCAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATGTTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCaa                      >  1:198167/1‑141 (MQ=255)                                                                                                                  aCAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTGCAAGACTATGCCCCaa                      >  1:327803/1‑141 (MQ=11)                                                                                                                  aCAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAAAATTAAGAGACCGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAACATGCCCCaa                      >  2:326591/1‑141 (MQ=11)                                                                                                                   cAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGTGCTATCATAATATAACTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAAt                     >  1:113394/1‑141 (MQ=11)                                                                                                                    aaGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATGTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTATACCGTTGGGTTCAAGAATATGCCCCAAtt                    >  2:27694/1‑141 (MQ=12)                                                                                                                    aaGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAAtt                    >  2:280789/1‑141 (MQ=255)                                                                                                                    aaGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAAtt                    >  1:173371/1‑141 (MQ=12)                                                                                                                     aGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGAGCA‑GTGCAGGAAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCACttt                   >  1:367510/1‑141 (MQ=11)                                                                                                                        aTGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTtat                <  2:233478/141‑1 (MQ=255)                                                                                                                         tGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTtata               <  2:217926/141‑1 (MQ=255)                                                                                                                          gTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACATTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCACCAATTTTatat              >  1:216961/1‑141 (MQ=255)                                                                                                                           ttATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATc             >  1:336915/1‑141 (MQ=25)                                                                                                                           ttATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATc             >  2:193814/1‑141 (MQ=255)                                                                                                                            tATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCa            <  1:297940/141‑1 (MQ=255)                                                                                                                             aTCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGGTCAAGAATATGCCCCAATTTTATATCaa           >  1:94327/1‑141 (MQ=21)                                                                                                                                  tGTAGCCGTTGGTTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTg      <  1:303295/141‑1 (MQ=21)                                                                                                                                   gcaGCCGTTGGCTACTATCTAAGACATGCATTGAGTTATCGCGATATATCTGAAATATTAAGGGAACGTG‑GTGTAATCGCTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTgg     <  1:82767/139‑1 (MQ=255)                                                                                                                                   gaaGCCGTTGGCTACTATCCAAGATATGGATTGAGTTATCGTGATATATCTGAAAGATCACGGGAACGGG‑GTGTACACGTTCATCCCTCAACGGTCTACCGCTGGGCCCAAGAATATGCCCCAATTTTATATCAAATTTgg     <  2:104167/139‑1 (MQ=11)                                                                                                                                   gTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTgg     >  2:115989/1‑141 (MQ=35)                                                                                                                                    tAGCCGTTGGCTACTATCTAAGATCTGCATTGAGCTATCGTGATATATCGGAAGTATTAAGAGACGGTG‑GAGAAAAGGTTCATCATTCAACGATCGAGCGTTGGGTGCAAGAATATGCCCCAAGTTTAGATCAAATTTGga    >  2:320178/1‑141 (MQ=11)                                                                                                                                    tAGCCGTTGGCTACTAGCTAAGATATGCATTGAGCTATTGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATACAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGga    >  1:207752/1‑141 (MQ=11)                                                                                                                                      gCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGgaag  >  1:245417/1‑141 (MQ=255)                                                                                                                                        |                                                                                                                                           CAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAG  >  CP000730/76129‑76403 | 
| Alignment Legend | 
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG | 
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑ |