| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description | 
| RA | CP000730 | 76,353 | G→A | 45.4% | intergenic (+411/‑723) | USA300HOU_0072 → / → USA300HOU_0075 | universal stress protein/lysophospholipase | 
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 76,353 | 0 | G | A | 45.4% | 53.3 / 174.9 | 163 | intergenic (+411/‑723) | USA300HOU_0072/USA300HOU_0075 | universal stress protein/lysophospholipase | 
| Reads supporting (aligned to +/- strand): ref base G (48/40); new base A (45/29); total (93/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.11e-01 | |||||||||||
Only 100 of 165 total aligned reads displayed.
GTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCATAAAAAGCTAATTACAAATGGCGTATTGATGAGACGTACATCAAAATAAAAGGAAAATGGAGCTATTTATATCGTGCCAT  >  CP000730/76213‑76491                                                                                                                                             |                                                                                                                                          gTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACgg                                                                                                                                            <  2:22444/141‑1 (MQ=32) tATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGt                                                                                                                                           >  2:89601/1‑141 (MQ=17) tATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGt                                                                                                                                           <  1:19407/141‑1 (MQ=17)   tGAACTATTTCAGATCTAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTACGATATGCATTGAGGTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAAAGTTCATCATTCAACGGTCt                                                                                                                                         >  2:213949/1‑141 (MQ=11)   tGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCt                                                                                                                                         >  2:5009/1‑141 (MQ=12)      aCTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTAcc                                                                                                                                      <  1:97905/141‑1 (MQ=17)      aCTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTAGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTGCAACATTCAACGGTCTAcc                                                                                                                                      >  1:196248/1‑141 (MQ=255)        tATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGt                                                                                                                                    <  2:104421/141‑1 (MQ=17)        tATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGt                                                                                                                                    <  2:272632/141‑1 (MQ=32)         ttttCCGATATAAACAATTTCACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGtt                                                                                                                                   <  2:193461/140‑1 (MQ=11)         aTTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGtt                                                                                                                                   >  1:356484/1‑141 (MQ=17)         aTTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGtt                                                                                                                                   >  1:303221/1‑141 (MQ=17)          tttCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTg                                                                                                                                  <  1:112097/141‑1 (MQ=12)          tttCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTg                                                                                                                                  <  1:92849/141‑1 (MQ=12)            tgaGATATAAACATTTTAACAAGGTTGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTCCCGTTggg                                                                                                                                <  2:289370/139‑1 (MQ=255)            tCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTggg                                                                                                                                <  2:213210/141‑1 (MQ=17)             cAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATGATTCAAGGATCTACCGTTGGGt                                                                                                                               >  2:197192/1‑141 (MQ=11)             cAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGt                                                                                                                               >  1:62543/1‑141 (MQ=12)             cAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACAATCTACCGTTGGGt                                                                                                                               >  2:139883/1‑141 (MQ=255)              aGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGtt                                                                                                                              >  1:164112/1‑141 (MQ=32)              aGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGtt                                                                                                                              >  2:119287/1‑141 (MQ=255)               gATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAACTATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTc                                                                                                                             >  2:165617/1‑141 (MQ=17)               gATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTc                                                                                                                             <  1:234082/141‑1 (MQ=255)                atatAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCa                                                                                                                            <  1:271861/141‑1 (MQ=17)                 tataAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATGGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGCCTACCGTTGGGTTCag                                                                                                                           >  1:356164/1‑140 (MQ=12)                  ataAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAg                                                                                                                          <  1:138836/141‑1 (MQ=17)                   taAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGa                                                                                                                         >  1:66343/1‑141 (MQ=17)                   taAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGa                                                                                                                         <  2:305998/141‑1 (MQ=17)                   taAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATACGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGa                                                                                                                         >  2:27763/1‑141 (MQ=17)                      aCAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAata                                                                                                                      >  2:261069/1‑141 (MQ=12)                      aCAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAata                                                                                                                      <  1:150092/141‑1 (MQ=255)                        aaTTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTC‑GTGCAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATg                                                                                                                    <  2:185735/141‑1 (MQ=12)                          tttAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACTATCTACCGTTGGGTTCAAGAATATGcc                                                                                                                  <  2:3467/141‑1 (MQ=255)                           ttAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGccc                                                                                                                 >  2:202779/1‑141 (MQ=12)                            tAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGcccc                                                                                                                <  2:334809/141‑1 (MQ=17)                            tAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGcccc                                                                                                                <  1:130882/141‑1 (MQ=12)                             aaCAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCa                                                                                                               >  1:281408/1‑141 (MQ=17)                             aaCAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTAATCCTTCAACGGTCTACCGTTGGGTTCAAGAATGTGCCCCa                                                                                                               >  2:8626/1‑141 (MQ=12)                              aCAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCCGAAATATTAAGGGAACGTG‑GTGTAAACGTTCAGCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCaa                                                                                                              >  2:113243/1‑141 (MQ=12)                              aCAAGGATGTTATCACTGTAGCTGTTGGCTACTATCGAAGATATGCTCTGATGTGTCTTGATATATCTGAAATATTAAGGGAACGTG‑GTGTACACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCaa                                                                                                              >  2:134410/1‑141 (MQ=11)                              aCAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCaa                                                                                                              <  2:95711/141‑1 (MQ=32)                              aCAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAAAATTAAGGGAACGTG‑GTGTAAACGTTCAGCATTAAACGGTCTACGGTTGGTGTCAAGATTATGCCCCaa                                                                                                              >  2:72824/1‑141 (MQ=11)                              aCAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTGTCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCaa                                                                                                              >  1:249234/1‑141 (MQ=255)                              aCAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATGTTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCaa                                                                                                              >  1:198167/1‑141 (MQ=255)                              aCAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTATGAGAACGTG‑GTGTAAAAGTTCATCATTCAACGATCTAACGTTGGGTTCAAGAATGTGCCCCaa                                                                                                              >  1:85380/1‑141 (MQ=11)                              aCAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCaa                                                                                                              >  1:98996/1‑141 (MQ=255)                              aCAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTGCAAGACTATGCCCCaa                                                                                                              >  1:327803/1‑141 (MQ=11)                              aCAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATAATTCAACGATCTACCGTTGGGTTCAAGAATATACCCCaa                                                                                                              >  2:135193/1‑141 (MQ=11)                               cAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGTGCTATCATAATATAACTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAAt                                                                                                             >  1:113394/1‑141 (MQ=11)                                aaGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATGTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTATACCGTTGGGTTCAAGAATATGCCCCAAtt                                                                                                            >  2:27694/1‑141 (MQ=12)                                aaGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAAtt                                                                                                            >  1:173371/1‑141 (MQ=12)                                aaGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAAtt                                                                                                            >  2:283246/1‑141 (MQ=12)                                 aGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGAGCA‑GTGCAGGAAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCACttt                                                                                                           >  1:367510/1‑141 (MQ=11)                                  ggATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAAtttt                                                                                                          >  2:199765/1‑141 (MQ=17)                                    aTGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTtat                                                                                                        <  2:233478/141‑1 (MQ=255)                                      gTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACATTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCACCAATTTTatat                                                                                                      >  1:216961/1‑141 (MQ=255)                                       ttATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATc                                                                                                     >  2:193814/1‑141 (MQ=255)                                        tATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCa                                                                                                    >  2:235591/1‑141 (MQ=25)                                        tATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCa                                                                                                    <  2:60671/141‑1 (MQ=255)                                        tATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCa                                                                                                    <  1:297940/141‑1 (MQ=255)                                         aTCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCAAATCTGCTATCaa                                                                                                   >  1:136259/1‑141 (MQ=11)                                              tGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTg                                                                                              <  1:28773/141‑1 (MQ=21)                                               gcaGCCGTTGGCTACTATCTAAGACATGCATTGAGTTATCGCGATATATCTGAAATATTAAGGGAACGTG‑GTGTAATCGCTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTgg                                                                                             <  1:82767/139‑1 (MQ=255)                                                tAGCCGTTGGCTACTATCTAAGATCTGCATTGAGCTATCGTGATATATCGGAAGTATTAAGAGACGGTG‑GAGAAAAGGTTCATCATTCAACGATCGAGCGTTGGGTGCAAGAATATGCCCCAAGTTTAGATCAAATTTGga                                                                                            >  2:320178/1‑141 (MQ=11)                                                tAGCCGTTGGCTACTAGCTAAGATATGCATTGAGCTATTGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATACAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGga                                                                                            >  1:207752/1‑141 (MQ=11)                                                 aGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCCAATTTGgaa                                                                                           >  1:29865/1‑141 (MQ=255)                                                 aGCCGTTGGCTACTATCACAAATATTTATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGgaa                                                                                           >  2:361569/1‑141 (MQ=11)                                                  gctgTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGgaag                                                                                          >  2:335437/4‑141 (MQ=25)                                                  gCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGgaag                                                                                          >  2:372491/1‑141 (MQ=255)                                                  gCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGgaag                                                                                          >  1:245417/1‑141 (MQ=255)                                                    tgTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGGAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAGTTTGgaagaa                                                                                        >  2:308894/2‑141 (MQ=21)                                                      ttGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGaaaa                                                                                      >  1:335337/1‑141 (MQ=35)                                                      ttGGATAGTATCAAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGATTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGaaaa                                                                                      >  2:44382/1‑141 (MQ=11)                                                        ggttacttTCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAg                                                                                    <  2:130687/138‑1 (MQ=255)                                                         gCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATGTGCTGGAATTTTATAACAACATTGGAAGAAAAAGc                                                                                   >  2:184108/1‑141 (MQ=11)                                                          ctactaTCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCa                                                                                  <  2:24166/141‑1 (MQ=35)                                                             ctaTCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCATaa                                                                               <  1:245157/141‑1 (MQ=255)                                                             ctaTCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCATaa                                                                               <  1:104061/141‑1 (MQ=255)                                                              aaTCTAAGATATTCATTGAGCTAACGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCATaaa                                                                              <  2:104296/140‑1 (MQ=11)                                                                tCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCATaaaaa                                                                            <  1:197152/141‑1 (MQ=35)                                                                 atAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAGGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCATaaaaaa                                                                           <  2:286866/140‑2 (MQ=255)                                                                  tAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCATaaaaaaa                                                                          >  2:207254/1‑139 (MQ=18)                                                                   aaGATATGCATGGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCATaaaaaacc                                                                         >  2:100983/1‑138 (MQ=11)                                                                    aGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTCGAAGAAAAACCATaaaaaagct                                                                        >  2:176971/1‑137 (MQ=9)                                                                    aGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCATaaaaaagct                                                                        >  2:339999/1‑137 (MQ=11)                                                                    aGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTG‑GTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCATaaaaaagct                                                                        >  1:316034/1‑137 (MQ=11)                                                                         tGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCATAAAAAGCTAATTAc                                                                   <  1:232084/141‑1 (MQ=255)                                                                         ggCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCATAAAAAGCTAATTAc                                                                   <  1:210103/140‑1 (MQ=255)                                                                                   tATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTAATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCATAAAAAGCTAATTACAAATGGCGTa                                                         >  1:12623/1‑141 (MQ=255)                                                                                      cGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCATAAAAAGCTAATTACAAATGGCGTATtg                                                      <  2:83984/141‑1 (MQ=39)                                                                                          atatatCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCCATTGTATATCAAATTTGGAAGAAAAAGCATAAAAAGCTAATTACAAATGGCGTATtgatga                                                  <  1:103729/141‑1 (MQ=255)                                                                                              atttGAAATATTAAGGGACCGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGGTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCATAAAAAGCTAATTACAAATGGCGTATTGATGAGACg                                              <  2:247691/138‑1 (MQ=255)                                                                                               tCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCATAAAAAGCTAATTACAAATGGCGTATTGATGAGACGt                                             <  1:340717/141‑1 (MQ=40)                                                                                                    aaTATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCATAAAAAGCTAATTACAAATGGCGTATTGATGAGACGTACATc                                        <  1:335496/141‑1 (MQ=40)                                                                                                        ttAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTCCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCATAAAGAGCTAATTACAAATGGCGTATTGTTGACACGTACATCaaaa                                    >  1:168859/1‑141 (MQ=255)                                                                                                              gAACGTG‑GTGTAAACGTGCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCATAAAAAGCTAATTACAAATGGCGTATTGATGAGACGTACATCAAAATAAAAg                              <  1:150105/141‑1 (MQ=38)                                                                                                                        gtAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCATAAAAAGCTAATTACAAATGGCGTATTGATGAGACGTACATCAAAATAAAAGGAAAATGGa                     >  1:320145/1‑141 (MQ=39)                                                                                                                               ttCATCATTCAACGGTCTACCGTTGGGTTCCAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCATAAAAAGCTAATTACAAATGGCGTATTGATGAGACGTACATCAAAATAAAAGGAAAATGGAGCTAttt              <  2:164112/141‑1 (MQ=255)                                                                                                                               ttCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCATAAAAAGCTAATTACAAATGGCGTATTGATGAGACGTACATCAAAATAAAAGGAAAATGGAGCTAttt              <  2:128590/141‑1 (MQ=40)                                                                                                                                           cGGTCTACCGTTGGGTTCAAGAATATGCCCACATTTTGTATAAAATTTCGAAGATAGAGCATAAGAAGCTAATTACAAATGGCGTATTGATGAGACGTACATCAAAATAAAAGGAAAGTGGAGCTATTTATATCGTGCCAt  >  2:78754/1‑141 (MQ=11)                                                                                                                                             |                                                                                                                                          GTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTG‑GTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCATAAAAAGCTAATTACAAATGGCGTATTGATGAGACGTACATCAAAATAAAAGGAAAATGGAGCTATTTATATCGTGCCAT  >  CP000730/76213‑76491 | 
| Alignment Legend | 
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG | 
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑ |