New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 = 45071625 (0.380)33 (0.580) 27/226 NT 63.0% intergenic (+83/‑266) set19/set20 staphylococcal exotoxin/staphylococcal exotoxin
?CP000730 451778 = 17 (0.300)intergenic (+77/‑369) set20/set21 staphylococcal exotoxin/staphylococcal exotoxin

CATGGCAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTGTTATGTTCGATGATTTGAGAACCCGAATTTTCGATGGGTCCAAATATGACGTGGAAGAGACCTGAATTTATCTGTAAATCCCTATCTATCGGGTGTGAAGCACAACGGGATCAGTTTTATTTAACGAACATTATAGATT  >  CP000730/450576‑450856
                                                                                                                                            |                                                                                                                                            
cATGGCAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTT                                                                                                                                              >  1:710142‑M1/1‑141 (MQ=255)
  tGGCAGATGTCATAGATGGCACTAATATTGATCACATTGAAGTGAATATAAAATAATCATGACAATCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGAAAACGGCCTACATGTTCCATAGCTTCATTTtt                                                                                                                                            >  2:118344‑M1/1‑139 (MQ=255)
  tGGCAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTGt                                                                                                                                            >  2:302976/1‑141 (MQ=255)
     cAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAAGAATCATGACATTCTCTAAATAGAAGCTGTCATCGTAGAAACAAGAAGTTAAGTGACTACGGCCTACATGTTGCTTAGCTTCTTTTttgtg                                                                                                                                         >  2:433908‑M1/1‑136 (MQ=255)
      aGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTttgtgt                                                                                                                                        >  1:73576‑M1/1‑135 (MQ=255)
               aGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAACTATAAGCTGTCATCGGAAAAAACAGAAATTAAGTGACAACGGCCTCAATGTTTCTTAGCTTCTTTTttgtgttggaaagct                                                                                                                               >  2:147145‑M1/1‑126 (MQ=255)
               aGATGGCACTAATATTAATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTAGCATCGGAAAAACAAGAAGTTAAGTAACAACGGCCTACATGTTGCTTAGCTTCTTTTGTTATGTTCgatgct                                                                                                                               >  2:204148/1‑139 (MQ=255)
                  tGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTttgtgttggagagatgaa                                                                                                                            >  1:747543‑M1/1‑123 (MQ=255)
                  tGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCCTTTtggtgttggagagatgaa                                                                                                                            <  1:405512‑M1/141‑19 (MQ=255)
                    gCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTttgtgttggagagatgaaaa                                                                                                                          <  1:498725‑M1/141‑21 (MQ=255)
                        tAATATTGATAACATTGAAGTGAATAGAAAATAATCATGATATAATCTAAATAGATGCTGACATAGGCAAATCAAGATGATAAGTGACAAAGGCATAGATGTTGCTTAGATACTTTTATTATGTGCgaggcttgtggatct                                                                                                                      >  2:119867/1‑128 (MQ=2)
                         aaTATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTttgtgttggagagatgaaaatgaag                                                                                                                     <  1:519579‑M1/141‑26 (MQ=255)
                          atatTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTttgtgttggagagatgaaaatgaagc                                                                                                                    <  1:371094‑M1/141‑27 (MQ=255)
                          aaattgATAATATTGAAGTGAATATAAAATAATCATGACATTCCTTAAATAGAAGCGGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTttgtgttggagagatgaaaatgaagc                                                                                                                    <  2:774311‑M1/139‑27 (MQ=255)
                             ttGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTACATAGAATCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTttgtgttggagagatgaaaatgaagcgta                                                                                                                 >  1:416087‑M1/1‑112 (MQ=255)
                               gATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTttgtgttggagagatgaaaatgaagcgtatc                                                                                                               >  1:83441‑M1/1‑110 (MQ=255)
                               gATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATAGGAAAAACAAGAAGTTAAGTGACAACGGCCTACAAGTTGCTTAGCTTCTTTTttgtgttggagagatgaaaatgaagcgtata                                                                                                               >  2:143705‑M1/1‑110 (MQ=255)
                               gATAACAATGAAGTGAATATAAAATAATCCTGACATTCTCTAAAGAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGGGACAACGGCCTACATGTTGCTTAGCTTCTTTTGTTATGTTCGATGATTTGAGAACCCGAAttt                                                                                                               <  1:703315/141‑1 (MQ=255)
                                 tAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTCCTTAGCTTCTTTTGTTATGTTCGATGATTTGAGAACCCGAATTTTc                                                                                                             >  1:22484/1‑141 (MQ=255)
                                   aCATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAGCGGCCTACATGTTGCTTAGCTTCTTTTGTTATGTTCGATGATTTGGGAACCCGAATTTTCGa                                                                                                           >  1:172812/1‑141 (MQ=255)
                                   aCATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTGTTATGTTCGATGATTTGAGAACCCGAATTTTCgt                                                                                                           >  1:562601/1‑140 (MQ=255)
                                     aTTGAAGTGAATATAGAATCATCATGACATTCTCTAAATAGAAGCTGTAATCGGAAAAACACGAAGTGAAGTGAGAACGGCCTACATGTTACTTAGCTTCTTTTttgtgttggagagatgaaaatgaagcatatcgatgaa                                                                                                         >  1:589322‑M1/1‑104 (MQ=255)
                                     aTTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTttgtgttggagagatgaaaatgaagcgtatcgatgaa                                                                                                         >  2:664033‑M1/1‑104 (MQ=255)
                                       tGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTGTTATGTTCGATGATTTGAGAACCCGAATTTTCGATggg                                                                                                       >  2:299905/1‑141 (MQ=255)
                                        gAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAATGGCCTACATGTTGCTTAGCTTCTTTGttgtgttggagtgatgaaaatgaatcgtatcgatgaataa                                                                                                      >  2:717450‑M1/1‑101 (MQ=255)
                                        gAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTttgtgttggagagatgaaaatgaagcttatcgatgaataa                                                                                                      >  2:269383‑M1/1‑101 (MQ=255)
                                        gAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTttgtgttggagagatgaaaatgaagcgtatcgatgaataa                                                                                                      <  1:428021‑M1/141‑41 (MQ=255)
                                          aGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTGTTATGTTCGATGCTTTGAGAACCCGAATTTTCGATGGGTcc                                                                                                    >  2:656436/1‑141 (MQ=255)
                                               atatAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTGTTATGTTCGATGATTTGAGAACCCGAATTTTCGATGGGTCCAAata                                                                                               >  2:725233/1‑141 (MQ=255)
                                                tataAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCGACATGTTGCTTAGCTTCTTCTttgtgttggagagatgaaaatgaagcgtatcgatgaataataaaaaca                                                                                              <  1:418145‑M1/141‑49 (MQ=255)
                                                    aaaTAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTttgtgttggcgagatgaaaatgaagcgtctcgatgaataataaaaacaccaa                                                                                          >  2:618916‑M1/1‑89 (MQ=255)
                                                    aaaTAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTGTTATGTTCGATGATTTGAGAACCCGAATTTTCGATGGGTCCAAATATGACg                                                                                          >  1:123018/1‑141 (MQ=255)
                                                          tCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTttgtgttggagagatgaaaatgaagcgtatcgatgaataataaaaacaccaataaaac                                                                                    <  1:779656‑M1/141‑59 (MQ=255)
                                                           cATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTTTTTTGTTATGTTCGATGATTTGAGAACCCGAATTTTCGATGGGTCCAAATATGACGTGGAaga                                                                                   <  1:423402/141‑1 (MQ=255)
                                                               aCATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTGTTATGTTCGATGATTTGAGAACCCGAATTTTCGATGGGTCCTAATATGACGTGGAAGAGAcc                                                                               <  1:479743/141‑1 (MQ=255)
                                                                 aTTGTCTAAATAGAAGCGGTCATCGGAAAAACAAGCAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTGTTATGTTCGATGATTTGAGAACCCGACTTTTCGATGGGTCCAAATATGACGTGGAAGAGACCTg                                                                             <  2:208978/141‑1 (MQ=255)
                                                                 aTTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTttgtgttggagagatgaaaatgaagcgtatcgatgaataataaaaacaccaataaaacttgtgga                                                                             >  1:234296‑M1/1‑76 (MQ=255)
                                                                  ttCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTttgtgttggagagatgaaaatgaagcgtatcgatgaataataaaaacaccaataaaacttgtggaa                                                                            >  2:327955‑M1/1‑75 (MQ=255)
                                                                  ttCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTGTTATGTTCGATGATTTGAGAACCCGAATTTTCGATGGGTCCAAATATGACGTGGAAGAGACCTGa                                                                            >  1:599021/1‑141 (MQ=255)
                                                                   tctcTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTttgtgttggagagatgaaaatgaagcgtatcgatgaataataaaaacaccaataaaacttgtggaaa                                                                           <  2:778074‑M1/141‑68 (MQ=255)
                                                                          aTAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTttttttttttttgatgaaaatgaagcgtatcgatgattaataaaaataccgataaaacttgtggaaatagttga                                                                    >  2:53523‑M1/1‑67 (MQ=255)
                                                                              aaGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGGTGCTTAGCTTCTTTTttgtgttggagagatgaaaatgaagcgtatcgatgaataataaaaacaccaataaaacttgtggaaatagttgatact                                                                <  2:255177‑M1/141‑79 (MQ=255)
                                                                                gCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTGTTATGTTCGATGATTTGAGAACCCGAATTTTCGATGGGTCCAAATATGACGTGGAAGAGACCTGAATTTATCTGTAGAt                                                              >  1:233559/1‑141 (MQ=255)
                                                                                gCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTGTTATGTTCGATGATTTGAGAACCCGAATTTTCGATGGGTCCAAATATGACGTGGAAGAGACCTGAATTTATCTGTAAAt                                                              >  1:233419/1‑141 (MQ=255)
                                                                                 cTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTGTTATGTTCGATGATTTGAGAACCCGAATTTTCGATGGGTCCAAATATGACGTGGAAGAGACCTGAATTTATCTGTAAATc                                                             <  1:565217/141‑1 (MQ=255)
                                                                                     cATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTGTGCTTCTCTTctgtttaggagagatgaaaatgaagcatatcgctgaagcataaaaacaccaataaaacttgtgggaatagttgatacttatcatc                                                         >  2:48817‑M1/1‑56 (MQ=255)
                                                                                        cGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTttgtgttggagagatgaaaatgaagcgtatcgatgaataataaaaacaccaataaaacttgtggaaatagttgatacttatagtcgcg                                                      >  2:687022‑M1/1‑53 (MQ=255)
                                                                                             taaCAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTCTTGTTATGTTCGATGATTTGAGAACCCGAATTTTCGATGGGTCCAAATATGACGTGGAAGAGACCTGAATTTATCTGTAAATCCCTATCTATCgg                                                 <  1:553737/140‑1 (MQ=255)
                                                                                                cAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTGTTATGTTCGATGATTTGAGAACCCGAATTTTCGATGGGTCCAAATATGACGTGGAAGAGACCTGAATTTATCTGTAAATCCCTATCTATCGGgtg                                              >  1:279262/1‑141 (MQ=255)
                                                                                                cAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTGTTATGTTCGATGATTTGAGAACCCGAATTTTCGATGGGTCCAAATATGACGTGGAAGAGACCTGAATTTATCTGTAAATCCCTATCTATCGGgtg                                              >  1:527466/1‑141 (MQ=255)
                                                                                                 aagaagTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTttgtgttggagagatgaaaatgaagcgtatcgatgaataataaaaacaccaataaaacttgtggaaatagttgatacttatagtcgcgcgttgtcct                                             <  2:648011‑M1/141‑98 (MQ=255)
                                                                                                  agaagTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTttgtgttgtagagatgaaaatgaagcgtatcgatgaataataaaaacaccaataaagcttgtggaaatagttgatacttatagtcgcgcgttgtcctt                                            >  1:541829‑M1/1‑43 (MQ=255)
                                                                                                  agaagTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTttgtgttggagagatgaaaatgaagcgtatcgatgaataataaaaacaccaataaaacttgtggaaatagttgatacttatagtcgcgcgttgtcctt                                            >  1:246997‑M1/1‑43 (MQ=255)
                                                                                                  agaagTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTttgtgttggagagatgaaaatgaagcgtatcgatgaataataaaaacaccaataaaacttgtggaaatagttgatacttatagtcgcgcgttgtcctt                                            >  1:247036‑M1/1‑43 (MQ=255)
                                                                                                   gaagTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTGTTATGTTCGATGATTTGAGAACCCGAATTTTCGATGGGTCCAAATATGACGTGGAAGAGAGCTGAATTTATCTGTAAATCCCTATCTATCGGGTGTGa                                           <  2:130461/141‑1 (MQ=255)
                                                                                                   aaagTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTGTTATGTTCGATGATTTGAGAACCCGAATTTTCGATGGGTCCAAATATGACGTGGAAGAGACCTGAATTTATCTGTAAATCCCTATCTATCGGGTGTGa                                           <  1:693208/140‑1 (MQ=255)
                                                                                                             gACAACGGCCTACATGTTGCTTAGCTTCTTTTttgtgttggagagatgaaaatgaagcgtatcgatgaataataaaaacaccaataaaccttgtggaaatagttgatacttatagtcgcgcgttgtccttttcgtgacatg                                 <  2:311499‑M1/141‑110 (MQ=255)
                                                                                                              aCAACGGCCTACATGTTGCTTAGCTTCTTTTttgtgttggagagatgaaaatgaagcgtatcgatgaataataaaaacaccaataaaacttgtggaaatagttgatacttatagtcgcgcgttgtccttttcgtgacatga                                <  2:644769‑M1/141‑111 (MQ=255)
                                                                                                                     ccTACATGTTGCTTAGCTTCTTTTttgtgttggagagatgaaaatgaagcgtatcgatgaataataaaaacaccaataaaacttgtggcaatagttgatacttatagtcgcgcgttgtccttttcgtgaactgaaacaatg                         >  2:313435‑M1/1‑24 (MQ=255)
                                                                                                                         cATGTTGCTTAGCTTCTTTTGTTATGGTCGATGATTTGAGAACCCGAATTTTTGATGGGTCCAAATATGACGTGGAAGAGACCTGAATTTATCTGTAAATCCCTATCTATCGGGTGTGAAGCACAACGGGATCAGTtttat                     <  2:259146/141‑1 (MQ=255)
                                                                                                                                  tAGCTTCTTTTttgtgttggagagatgaaaatgaagcgtatcgatgaataataaaaacaccaataaaacttgtggaaatagttgatacttatagtcgcgcgttgtccttttcgtgacatgaaacaatgtggaaaacatagt            <  1:327955‑M1/141‑131 (MQ=255)
                                                                                                                                  tAGCTTCTGGTGTTATGTTAGATGAGTTGAGACCCCGAATGTTCGATGGGTCCAAATATGACGTGGAAGAGACCTGAATTTATCTGTCAATCCCTATCTAGCGGGTGTGAAGCACAACGGGATCAGTTTTATTTAACGAAc            <  2:14010/141‑1 (MQ=255)
                                                                                                                                  tAGCGTCTTTTttgtgttggagagatgaaaatgaagcgtatcgaggaataataaaaacaccaataaaacttgtggaaatagttgatacttatagtcgcgcgttgtccttttcgtgacatgaaacaatgtggaaaacatagt            <  1:209024‑M1/141‑131 (MQ=255)
                                                                                                                                    gCTTCTTTTttgtgttggagagatgaaaatgaagcgtatcgatgaataataaaaacaccaataaaacttgtggaaatagttgatacttatagtcgcgcgttgtccttttcgtgacatgaaacaatgtggaaaacatagtta          >  1:435586‑M1/1‑9 (MQ=255)
                                                                                                                                     cttcttTTttgagttggagagatgaaaatgaagcgtatcgatgaataataaaaacaccaataaaacttgtggaaatagttgataattatagtcgcgcgttgtccttttcgtgacatgaaacaatgtggaaaacatagttaa         >  2:625156‑M1/1‑8 (MQ=255)
                                                                                                                                     cttcttTTGTTATGTTCGATGATTTGAGAACCCGAATTTTCGATGGGTCCAAATATGACGTGGAAGAGACCTGAATTTATCTGTAAATCCCTATCTATCGGGTGTGAAGCACACCGGGATGAGTGTTATTTAACGGACAtt         >  1:336318/1‑141 (MQ=255)
                                                                                                                                      ttcttTTttgtgttggagagatgaaaatgaagcgtatcgatgaataataaaaacaccaataaaacttgtggaaatagttgatacttatagtcgcgcgttgtccttttcgtgacatgaaacaatgtggaaaacatagttaaa        >  1:345314‑M1/1‑7 (MQ=255)
                                                                                                                                         ttttttgtgttggagagatgaaaatgaagcgtatcgatgaataataaaaacaccaataaaacttgtggaaatagttgatacttatagtcgcgcgttgtccttttcgtgacatgaaacaatgtggaaaacatagttaaattg     >  1:286322‑M1/1‑4 (MQ=255)
                                                                                                                                         ttttttgtgttggagagatgaaaatgaagcgtatcgatgaataataaaaacaccaataaaacttgtggaaatagttgatacttatagtcgcgcgttgtccttttcgtgacatgaaacaatgtggaaaacatagttaaattg     >  1:362347‑M1/1‑4 (MQ=255)
                                                                                                                                         ttttttgtgttggagagatgaaaatgaagcgtatcgatgaataataaaaacaccaataaaacttgtggaaatagttgatacttatagtcgcgcgttgtccttttcgtgacatgaaacaatgtggaaaacatagttaaattg     >  1:286334‑M1/1‑4 (MQ=255)
                                                                                                                                         ttttgtgtgttggagagatgaaaatgaagcgtatcgatgaataataaaaacaccaataaaacttgtggaaatagttgatacttatagtcgcgcgttgtccttttcgtgacatgaaacaatgtggaaaacatagttaaattg     <  1:487584‑M1/141‑138 (MQ=255)
                                                                                                                                          tttttgtgttggagagatgaaaatgaagcgtatcgatgaataataaaaacaccaataaaacttgtggaaatagttgatacttatagtcgcgcgttgtccttttcgtgacatgaaacactgtgggaaacatagttaaattga    >  2:396471‑M1/1‑3 (MQ=255)
                                                                                                                                           ttGTTATGTTCGATGATTTGAGAACCCGAATTTTCGATGGGTCCAAATATGGCGTGGAAGAGACCTGAATTTATCTGTAAATCCCTATCTATCGGGTGTGAAGCACAACGGGATAAGTTTTATTTAACGAACATTATAGAt   >  1:484299/1‑141 (MQ=255)
                                                                                                                                            tGTTATGTTCGATGATTTGAGAACCCGAATTTTCGATGGGTCCAAATATGACGTGGAAGAGACCTGAATTTATCTGTAAATCCCTATCTATCGGGTGTGAAGCACAACGGGATCAGTTTTATTTAACGAACATCATAGAtt  >  2:670041/1‑141 (MQ=255)
                                                                                                                                            |                                                                                                                                            
CATGGCAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTGTTATGTTCGATGATTTGAGAACCCGAATTTTCGATGGGTCCAAATATGACGTGGAAGAGACCTGAATTTATCTGTAAATCCCTATCTATCGGGTGTGAAGCACAACGGGATCAGTTTTATTTAACGAACATTATAGATT  >  CP000730/450576‑450856

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.