Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 2,774,873 A→G 7.4% D771D (GAT→GAC clfB ← clumping factor B

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007302,774,8730AG 7.4% 247.2 / 2.2 107D771D (GAT→GACclfBclumping factor B
Reads supporting (aligned to +/- strand):  ref base A (58/38);  new base G (6/3);  total (64/43)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 119 total aligned reads displayed.

GAGTCGCTATCTGAATCCGAGTCGCTATCCGAGTCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTC  >  CP000730/2774733‑2775013
                                                                                                                                            |                                                                                                                                            
gagtcGCTATCTGAATCCGAGTCGCTATCCGAGTCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAATCTGAATCACTTTCTGAATCCGAATCGCTatctgaa                                                                                                                                              >  1:340957/1‑141 (MQ=255)
 ggtcGCGAACTGAAGGCGTGTCGCTTTCCGGGTCTGAGTCGCTTTCTGAGTCTGAATCGCTGTCGGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTatctgaat                                                                                                                                             <  2:122354/140‑1 (MQ=17)
   tcGCTATCTGAATCCGAGTCGCTATCCGAGTCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTgtctgaatct                                                                                                                                           >  1:187327/1‑141 (MQ=255)
   tcGCTATCTGAATCCGAGTCGCTATCCGAGTCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTatctgaatct                                                                                                                                           >  1:618123/1‑141 (MQ=255)
    cGCTATCTGAATCCGAGTCGCTATCCGAGTCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTatctgaatctg                                                                                                                                          >  1:507911/1‑141 (MQ=255)
      cTATCTGAATCCGAGTCGCTATCCGAGTCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAGTCCGAATCGCTAtctgaatctgaa                                                                                                                                        >  1:412595/1‑141 (MQ=255)
        aTCTGAATCCGAGTCGCTATCCGAGTCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCtgaatctgaatc                                                                                                                                      <  1:544580/141‑1 (MQ=255)
           tGAATCCGAGTCGCTATCCGAGTCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCt                                                                                                                                   <  1:713116/141‑1 (MQ=255)
                  gAGTCGCTATCCGAGTCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTGTCCGAg                                                                                                                            >  2:476514/1‑141 (MQ=255)
                   aGTCGCTATCCGAGTCTGAGTCGCTATCTGAGTCTGAATCGCTGTGTGAGTTTGAGTCGCTGTCCGGGTCTGAGTCGCTGTCTGGATCTGAATCGGTGTCTGAGTCCGAGTCGCTATCGGAGTCTGAATCGCTGTCCGAGt                                                                                                                           >  2:678787/1‑141 (MQ=14)
                   aGTCGCTATCCGAGTCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGGCTGAATCGCTGTCTGAGTCCGAATCGCCATCTGAGTCTGAATCACTATCCGAgg                                                                                                                           >  2:42846/1‑140 (MQ=14)
                   aGTCGCTATCCGAGTCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAATCCGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGt                                                                                                                           >  2:8427/1‑141 (MQ=14)
                      cGCTATCCGAGTCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGCGTCACTGTCTGAATCCGGATCGCTATCTGAATCTGAGTCGCTATCCGAGTcgg                                                                                                                        >  2:319627/1‑139 (MQ=255)
                       gCTATCCGAGTCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGa                                                                                                                       <  1:568007/141‑1 (MQ=255)
                       gCTATCCGAGTCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGa                                                                                                                       >  1:132705/1‑141 (MQ=255)
                        tttgtcgtgTCTGAGTCGCTATCTGAGTCTGAATCGCTTTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCGGAATCTGAATCACTGTCTGAATCCGATTCTCTGTGTTATTCTGAATCGCTATCCGAGTCTGAg                                                                                                                      <  2:204189/133‑1 (MQ=17)
                          aTCCGAGTCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCCGATGCTGAGTCGCTGTCTGAAGCTGAATAGCTGTCGGAATCAGAGGAGATATCCAAAGCTGAATGGCTATCCGAGATTGAGTc                                                                                                                    >  2:163366/1‑141 (MQ=14)
                          aTCCGAGGCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTc                                                                                                                    <  2:112529/141‑1 (MQ=255)
                           tCCGAGTCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCg                                                                                                                   >  1:492627/1‑141 (MQ=255)
                            tttgttCTGTGTCGCTATTTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAGTCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGc                                                                                                                  <  2:78240/136‑1 (MQ=255)
                             cGAGTCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCt                                                                                                                 <  1:737576/141‑1 (MQ=255)
                                 tCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAGTCAGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAGTCCGAGCCGCTCTCTGAATCTGAATCCCTATCTGAGTCTGAGTAGCTGgct                                                                                                             >  2:148323/1‑141 (MQ=14)
                                  cTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGGCTGAATCCGAATCGCGATCTGAATCTGAATCGCTATCCGAGTCTGAGTACCTGtcta                                                                                                            >  2:68101/1‑140 (MQ=255)
                                   ggAGTCGCTATCTGGGTCTGAATCGCGGTCTGGGTCTGTGCGGGTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGtctga                                                                                                           <  1:608493/140‑1 (MQ=18)
                                    gAGTCGCTATCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAATCCGAATCGCTGTCTGAATCTGAATCGCTGTCCGAGTCTGAGTCGCTGtctgag                                                                                                          >  2:237346/1‑140 (MQ=255)
                                    gAGTCGCTATCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAATCCGAATCGCGGTCTGAATCTGAATCGCTGTCCGCGTCTGAGTCGCTGtctgaa                                                                                                          >  2:505228/1‑141 (MQ=17)
                                    gAGTCGCTATCTGAGTATGAATCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAGTCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGtctgaa                                                                                                          >  1:391584/1‑141 (MQ=255)
                                     aGTCGCTATCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCAGAATCGCTATCTGAATCTGAATCGCTATCGGAGCCTGAGACGCTGtctgact                                                                                                         >  1:355570/1‑139 (MQ=255)
                                           tATCTGAGTCTGATTCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAGTCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTctgaatctgaat                                                                                                   <  1:200233/141‑1 (MQ=255)
                                             tCTGAGTCTGAATCGCTGTCTGAGTCTGAGTGGCTATCCGAGTCTGAGTCGCTGTCGTAATCTTAATCACTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCGCTATCCGCGTCTGAGGCGCTGtctgactctgagttg                                                                                                 >  2:166807/1‑137 (MQ=14)
                                              cTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGc                                                                                                <  1:124267/141‑1 (MQ=255)
                                               tGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCt                                                                                               >  1:675002/1‑141 (MQ=255)
                                                      gAATCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTCTCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAg                                                                                        <  2:593797/141‑1 (MQ=255)
                                                      gAATCGCTGTCTGAGTCTGAGTCGCTATCCGAGGCTGAGTCGGTGTCTGACACTAAATCATTGTCTGGAACCGAATCGCTATCTGAATCTGAATCGCTATCCTATTCTGCGTCGCTGTCTGAATCTGAATCGCTGTCTGAg                                                                                        <  1:148917/141‑1 (MQ=18)
                                                       aaTCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAGTCTGAATCACTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGt                                                                                       >  2:560268/1‑141 (MQ=255)
                                                       aaTCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAAACCGAATCGCTGTCTGAga                                                                                       >  2:203179/1‑140 (MQ=255)
                                                       aaTAGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGATGTCTGAATCTGAATCGCTGTCTGAGt                                                                                       >  1:704972/1‑141 (MQ=255)
                                                        aTCGCTGTCTGAGTCTGAGTCGCTATCCGAGCCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAGTCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAGTCTACATGACTCTCTGAGTc                                                                                      >  2:122650/1‑141 (MQ=17)
                                                         tCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCAGTGTCTGAGTCCGAGTCGCTATCTGAAGCTGAATCGCTATCGGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGtgc                                                                                     >  2:284320/1‑139 (MQ=17)
                                                         tCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTcc                                                                                     >  1:282043/1‑141 (MQ=255)
                                                          cGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCAGTATCGCTGTCTGAGACCg                                                                                    >  2:239025/1‑141 (MQ=255)
                                                          cGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCg                                                                                    <  1:722208/141‑1 (MQ=255)
                                                            cTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAGTCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGaa                                                                                  <  2:632540/141‑1 (MQ=255)
                                                            cTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGaa                                                                                  <  1:685941/141‑1 (MQ=255)
                                                            cTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGaa                                                                                  <  1:644034/141‑1 (MQ=255)
                                                            cTGTCTGAGTCTGAGTCGCGTGCCGAGTGTGAGTCGCTGTCTGAATCTGAATCACTGTCTGACTCCGAATCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGaa                                                                                  <  1:176571/141‑1 (MQ=17)
                                                              gtctgagtctgaGTCGCTATCCGAGTCTGAGTCGCTGTCTGAGTCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTGTCCGAGTCTGAGTCGCTTTGTGAAACCGAATCGCTGGCTGAGTctgcagg                                                                                >  2:19929/1‑135 (MQ=17)
                                                               tctgattctgagTCGCTATCGGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGACTCTGAATCGCTATCCGAGTCTTAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCg                                                                               <  2:325709/141‑1 (MQ=255)
                                                               tctgagtctgagTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCg                                                                               >  1:330413/1‑141 (MQ=255)
                                                                 tgagtatgagtcGCTATCAGAGTCTGAGGCGGTGTCTGAATCTGAATCACTGTCTGAATCCGAATCACTATCTGAATCTGAATCTCTGTCCGAGTCTGAGTCGCTGTCTGCATCTGAATCGCCGCCTGAGTCTGAATCggt                                                                             >  1:581289/1‑139 (MQ=17)
                                                                  gagtctgagtcGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTa                                                                            >  1:622616/1‑141 (MQ=255)
                                                                  gagtctgagtcGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTa                                                                            >  1:2913/1‑141 (MQ=255)
                                                                  gagtctgagtcGCTATCCGAGTCTGAGCCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCGGGATCTGAATGGCTGTCTGAGTCCGACTGGCtc                                                                            >  1:130062/1‑140 (MQ=18)
                                                                  gagtccgagtcGCTATCCGAGTCTGAGTCGCTGTTTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTa                                                                            <  1:339102/141‑1 (MQ=255)
                                                                     tctgagtcGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTatct                                                                         >  1:721687/1‑141 (MQ=255)
                                                                     tctgagtcGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTatct                                                                         <  1:319627/141‑1 (MQ=255)
                                                                       tgagtcGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTatctga                                                                       >  1:324813/1‑141 (MQ=255)
                                                                         agtcGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAGTCGCTGTCTGAATCTGAGTCGCTATCTGAGTGTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCGGAGTCGCTatctgagt                                                                     >  2:249088/1‑139 (MQ=14)
                                                                             gCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATATGAATCGCTATCTGAATCTGAATCGCTATTAGTGTGTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTgtctgaatctta                                                                 >  2:657201/1‑139 (MQ=17)
                                                                               tATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGt                                                               >  1:565913/1‑141 (MQ=255)
                                                                                 tCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCg                                                             >  1:761555/1‑141 (MQ=255)
                                                                                   cGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCt                                                           >  1:365952/1‑141 (MQ=255)
                                                                                    gattccgAGTCGCTATCCGAATCTGATTCGCTGGCTGAGTCCGAATCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTg                                                          <  2:658694/135‑1 (MQ=11)
                                                                                        cTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCGGAATCTGAGTCTCTATCCGAGTCTGAGGCGCTGTCTGAATCTGGATCGCTGCCTGAGTCCGAATCGCTATCTGAATCTGATTCGCTgtcta                                                      >  1:25906/1‑140 (MQ=17)
                                                                                         tGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCGGAGTCGCTgtctgg                                                     >  1:218477/1‑140 (MQ=255)
                                                                                           aGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTgtctgagt                                                   >  1:681922/1‑141 (MQ=255)
                                                                                             tCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGGGTCCGAATCGCTATCTGAATCTGAGTCGATgtctgagtcg                                                 >  2:328922/1‑140 (MQ=255)
                                                                                             tCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCGACCTGAATCTGAGTCGCTgtctgagtcg                                                 >  2:469845/1‑140 (MQ=255)
                                                                                             tCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTAGCTGAGTCTGAATCGCTGGCTGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTGTCTGAGTCCGAGTCGCTATCTGAGTCTGAGGCGCTggctgagtct                                                 >  2:328882/1‑141 (MQ=11)
                                                                                             gcGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTTTCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTgtctgagtct                                                 <  2:245917/140‑1 (MQ=255)
                                                                                                   tctgaatctgaaTCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCg                                           <  1:685002/141‑1 (MQ=255)
                                                                                                    ctgaatctgaatCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGCATCTGAGTCGCTGTCTGAGTCTGAATCGc                                          >  1:568678/1‑141 (MQ=255)
                                                                                                     tgaatctgaatcACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGACTCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAAgcgcg                                         >  2:446274/1‑140 (MQ=255)
                                                                                                      gagtctgaatcACTGTCTGAGTCTGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTa                                        <  2:666476/138‑1 (MQ=255)
                                                                                                      gaatctgaatcACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGATTCTGAATGGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTa                                        >  1:775706/1‑141 (MQ=255)
                                                                                                        atctgaatcACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTatc                                      <  1:557663/141‑1 (MQ=255)
                                                                                                         tctgaatcACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAGTCGCTatct                                     >  2:142700/1‑141 (MQ=255)
                                                                                                         gctgaatcAGTGTCTGAATCCGAATCGCTATCTGAATCCGAGTCGGTTTCCAAGGCATAGTCGATGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTatct                                     <  1:372747/140‑1 (MQ=14)
                                                                                                             atggaCTCTCTGAATCTGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTatctgaat                                 <  1:174501/137‑1 (MQ=255)
                                                                                                             aatcACTGTCTGAATCCGAATCGCTCTCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGTGCCGCCGTCGGAGTCTGAATCGCTatctgaat                                 <  1:189393/141‑1 (MQ=17)
                                                                                                             aatcACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTatctgaat                                 <  1:229006/141‑1 (MQ=255)
                                                                                                             aatcACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTAAGTCCTAGTCGCACTGAGATACGTTGTCGCTGTCTGAGTCTGAATCGCTatctgaat                                 <  1:778634/141‑1 (MQ=17)
                                                                                                               tcACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTatctgaatct                               >  1:515741/1‑141 (MQ=255)
                                                                                                               tcACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTatctgaatct                               >  1:764405/1‑141 (MQ=255)
                                                                                                                cACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGTATGGGTgtctggatctg                              >  2:447925/1‑141 (MQ=14)
                                                                                                                aaCTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTatctgaatctg                              >  2:683318/2‑141 (MQ=255)
                                                                                                                  cTGTCTGACTCCGAATCGCTATCTGAATCTGAATCGTTTTCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAg                            <  2:545300/141‑1 (MQ=255)
                                                                                                                  cTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAg                            <  1:76758/141‑1 (MQ=255)
                                                                                                                  cTGTCTGAATCCGAATCGCTATCTGAACCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGATTCTGAATCGCTATCTGAATCTGAg                            <  1:505725/141‑1 (MQ=255)
                                                                                                                     tCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTGCGAATCGCTCTCTGAATCTGAATCGCTGTATGAGTCGGAATCGCTaactgaacgggagcgc                         >  2:174555/1‑132 (MQ=14)
                                                                                                                       tGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTACCAGAATCGAAGGCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCt                       >  1:373078/1‑141 (MQ=17)
                                                                                                                        caaTCCGAATCGCTATCTGAATCTGAATCGCTATCCGACTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTa                      <  2:690137/140‑1 (MQ=255)
                                                                                                                         aaTCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCggtgt                     >  2:525933/1‑137 (MQ=255)
                                                                                                                              gAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTAtctgag                >  1:495243/1‑141 (MQ=255)
                                                                                                                                 tCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCGGAGTCGCTAtctgagtct             >  1:212703/1‑141 (MQ=255)
                                                                                                                                 tCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTGTCTGACTCTGAGTCGCTAtctaagtcg             >  2:565506/1‑140 (MQ=255)
                                                                                                                                   gCTATCTGAATCTGAATCGCGATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTAtctgagtctga           <  1:584160/141‑1 (MQ=255)
                                                                                                                                   gCTATCTGAACCTGAATCGCTATCCGAGTCTGCGTCGCTGTCTGATTCTCAAGCCCCGTCTAAATCCGAATAGCGATCTGAATATGAATCACTGTCAGTATCAGAAGCGCTGTCTGAAACTGAGTCGCTGgcttaggctga           >  2:35843/1‑141 (MQ=9)
                                                                                                                                    cTATCTGAGTCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTTAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTAtctgagtctgag          <  1:163366/141‑1 (MQ=255)
                                                                                                                                            atctgaatcGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTAtctgagtctgagtcgctgtc  <  1:700153/141‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                            
GAGTCGCTATCTGAATCCGAGTCGCTATCCGAGTCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTC  >  CP000730/2774733‑2775013

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: