Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP00073035,9700TC60.0% 604.4 / inf 852E194E (GAA→GAG) tpnIS431mec transposase
Reads supporting (aligned to +/- strand):  ref base T (155/185);  new base C (240/270);  total (397/455)
Fisher's exact test for biased strand distribution p-value = 7.26e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 854 total aligned reads displayed.

CACTAATTTATCATGTCAGTGTTCGCTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGTCAGGTTTAAGTTTAAAAGC  >  CP000730/35851‑36110
                                                                                                                       |                                                                                                                                             
                cAGTGTTCGCTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATAc                                                                                                         <  1:713840/141‑1 (MQ=11)
                cAGTGTTCGCTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATAc                                                                                                         >  2:969101/1‑141 (MQ=11)
                  gtgtTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACtt                                                                                                       <  1:808325/141‑1 (MQ=11)
                  gtgtTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGCGATAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACtt                                                                                                       >  1:867251/1‑141 (MQ=255)
                  gtgtTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATTCCATCAATACCTTTTCACGTATTC‑TTTGCTGTATTGATACtt                                                                                                       >  1:824946/1‑141 (MQ=11)
                  gtgtTCGCTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGATCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACtt                                                                                                       >  1:106952/1‑141 (MQ=17)
                     tgcGCTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACtttca                                                                                                    <  2:368751/139‑3 (MQ=17)
                      tCGCTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGAt                                                                                                   <  1:386130/141‑1 (MQ=17)
                        gtttAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATat                                                                                                 >  2:415808/3‑140 (MQ=255)
                        gtttAACTTGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATAc                                                                                                 <  2:7424/139‑1 (MQ=17)
                         tttAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAAGACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATatc                                                                                                <  1:337399/140‑3 (MQ=11)
                         tttAACTTGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATAcc                                                                                                <  1:629019/140‑1 (MQ=17)
                         cTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATAcc                                                                                                <  2:728566/141‑1 (MQ=17)
                          ttAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCt                                                                                               <  2:513895/141‑1 (MQ=255)
                          ttAACTTGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCt                                                                                               >  1:615172/1‑141 (MQ=17)
                           tAACTTGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCtt                                                                                              <  1:249282/141‑1 (MQ=17)
                              cTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGtc                                                                                           <  1:518285/141‑1 (MQ=11)
                                tGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGtctt                                                                                         <  1:577309/141‑1 (MQ=17)
                                 gCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGtcttt                                                                                        >  2:934546/1‑141 (MQ=11)
                                  cTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGtctttc                                                                                       <  1:395385/141‑1 (MQ=11)
                                  cTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGtctttc                                                                                       <  1:156/141‑1 (MQ=17)
                                   tAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGtctttct                                                                                      <  1:2271/141‑1 (MQ=255)
                                   tAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGtctttct                                                                                      <  1:777401/141‑1 (MQ=17)
                                    aGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGtctttctt                                                                                     <  2:327658/141‑1 (MQ=17)
                                     gCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTa                                                                                    <  2:1027753/141‑1 (MQ=17)
                                      cATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATATAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTAc                                                                                   >  2:443005/1‑141 (MQ=18)
                                       atgatgCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACt                                                                                  >  2:925596/1‑141 (MQ=34)
                                       atgatgCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACt                                                                                  >  2:162367/1‑141 (MQ=21)
                                       atgatgCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACt                                                                                  >  2:608600/1‑141 (MQ=21)
                                         gatgCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACttt                                                                                <  1:200657/141‑1 (MQ=35)
                                         gatgCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACttt                                                                                <  2:859861/141‑1 (MQ=25)
                                         gatgCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACttt                                                                                <  1:558446/141‑1 (MQ=25)
                                          atgCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTa                                                                               <  2:884445/141‑1 (MQ=25)
                                            gCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGCTACTTTGATATCTTGTCTTTCTTACTTTAat                                                                             >  1:238275/1‑141 (MQ=11)
                                             cTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAata                                                                            >  2:301600/1‑141 (MQ=25)
                                                    cGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGt                                                                     <  2:954528/141‑1 (MQ=14)
                                                     gTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTATTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTg                                                                    >  1:897908/1‑141 (MQ=11)
                                                     gTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATCCACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTg                                                                    >  1:600776/1‑141 (MQ=255)
                                                      tGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGa                                                                   <  2:43148/141‑1 (MQ=255)
                                                       ggCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGAt                                                                  >  2:113773/1‑141 (MQ=14)
                                                       ggCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGAt                                                                  <  1:371371/141‑1 (MQ=255)
                                                          aTGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCtt                                                               <  2:244457/141‑1 (MQ=39)
                                                           tggggAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTg                                                              <  1:413718/137‑1 (MQ=14)
                                                           tGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTCTTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCtt                                                               <  2:35947/141‑1 (MQ=14)
                                                           tGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTg                                                              <  2:630374/141‑1 (MQ=255)
                                                            ggCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGc                                                             <  1:880795/141‑1 (MQ=39)
                                                            ggCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGc                                                             <  2:841864/141‑1 (MQ=38)
                                                            ggCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGc                                                             <  2:795692/141‑1 (MQ=255)
                                                             gggAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCt                                                            >  1:587301/3‑141 (MQ=255)
                                                             gCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCt                                                            >  1:676588/1‑141 (MQ=38)
                                                              ggAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTc                                                           >  2:554213/2‑141 (MQ=255)
                                                              cGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTc                                                           <  2:375508/141‑1 (MQ=255)
                                                               gAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCa                                                          <  1:499951/141‑1 (MQ=255)
                                                                   aTCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGCGCTTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGa                                                      <  1:274594/141‑1 (MQ=255)
                                                                   aTCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGa                                                      <  1:1014389/141‑1 (MQ=255)
                                                                   aTCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGa                                                      <  2:897666/141‑1 (MQ=255)
                                                                   aTCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGa                                                      >  2:981900/1‑141 (MQ=255)
                                                                     ccGTAGATCTGAAGAGACCTGCTGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAgg                                                    <  2:124527/141‑1 (MQ=255)
                                                                            tCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCa                                             <  1:965144/141‑1 (MQ=255)
                                                                             cTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAg                                            <  1:742680/141‑1 (MQ=255)
                                                                             cTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATATATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAg                                            <  2:140811/141‑1 (MQ=255)
                                                                              tGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGa                                           <  2:396031/141‑1 (MQ=255)
                                                                              tGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGa                                           <  2:867294/141‑1 (MQ=255)
                                                                              tGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGa                                           <  1:844916/141‑1 (MQ=255)
                                                                              agAAGAGACCTGCGGTTCTTTTTATATAGAGCTTAATTGCATTCAATACCTTGTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGa                                           <  1:727627/140‑1 (MQ=255)
                                                                                aaGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGata                                         <  2:22023/141‑1 (MQ=255)
                                                                                aaGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGata                                         >  2:195531/1‑141 (MQ=255)
                                                                                 agagACCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGatat                                        <  1:347446/141‑1 (MQ=255)
                                                                                     aCCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCg                                    <  1:475238/141‑1 (MQ=255)
                                                                                     aCCTACGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCg                                    >  2:1038845/1‑141 (MQ=255)
                                                                                      ccTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGa                                   <  1:1035554/141‑1 (MQ=255)
                                                                                       ctacGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGAt                                  <  2:818195/138‑1 (MQ=255)
                                                                                       cTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGAt                                  <  1:54570/141‑1 (MQ=255)
                                                                                       cTGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGAt                                  <  2:233755/141‑1 (MQ=255)
                                                                                        tGCGGTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATg                                 <  2:616897/141‑1 (MQ=255)
                                                                                         acGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGt                                >  2:688624/2‑141 (MQ=255)
                                                                                           ggTTCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTAc                              >  2:286099/1‑141 (MQ=255)
                                                                                              tCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAAt                           <  2:266362/141‑1 (MQ=255)
                                                                                              tCTTTTTATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAAt                           <  2:757661/141‑1 (MQ=255)
                                                                                                tttttATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGa                         <  2:64392/141‑1 (MQ=255)
                                                                                                 ttttATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGAc                        >  2:708499/1‑141 (MQ=255)
                                                                                                 ttttATATAGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATggc                        >  1:145380/1‑139 (MQ=255)
                                                                                                  tttATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACa                       >  1:761371/1‑141 (MQ=255)
                                                                                                    tatataGAGCGTAAATACATTCAATACGTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGt                     <  2:1012386/141‑1 (MQ=255)
                                                                                                    tatataGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGt                     >  2:581263/1‑141 (MQ=255)
                                                                                                    tatataGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGt                     <  2:459094/141‑1 (MQ=255)
                                                                                                    tatataGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGt                     <  1:170902/141‑1 (MQ=255)
                                                                                                     atataGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTTCTTTAATATGAAGGTGACATTAATGCATGGGGATATTCAGATACTTCGTTGTACAATGGCAGta                    >  1:95077/1‑140 (MQ=14)
                                                                                                     atataGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTc                    <  2:499336/141‑1 (MQ=255)
                                                                                                      tataGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGTCa                   >  1:695873/1‑141 (MQ=255)
                                                                                                        taGAGCGTAAATACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGt                     <  1:124821/137‑1 (MQ=255)
                                                                                                          gagCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGTCAGgtt               >  1:30815/1‑141 (MQ=255)
                                                                                                                aaaTACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGTCAGgtttaagtt         <  2:57055/141‑1 (MQ=255)
                                                                                                                aaaTACACTGAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGgtttaagtt         >  1:919588/1‑141 (MQ=255)
                                                                                                                 aaTACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGTCAGgtttaagttt        <  2:47711/141‑1 (MQ=255)
                                                                                                                 aaTACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGgtttaagttt        >  2:670618/1‑141 (MQ=255)
                                                                                                                  aTACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGgtttaagttta       <  1:434452/141‑1 (MQ=255)
                                                                                                                   tACATTCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGTCAGgtttaagtttaa      <  1:646899/141‑1 (MQ=255)
                                                                                                                   tACACTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGgtttaagtttaa      <  1:455250/141‑1 (MQ=255)
                                                                                                                       ttCAATACCTTTTAAAGTATTC‑TTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGTCAGGTTTAAGTTTAAAAGc  <  1:984960/141‑1 (MQ=255)
                                                                                                                       |                                                                                                                                             
CACTAATTTATCATGTCAGTGTTCGCTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACATTCAATACCTTTTAAAGTATTC‑TTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGTCAGGTTTAAGTTTAAAAGC  >  CP000730/35851‑36110

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑