Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 785,677 G→T 7.3% A27E (GCA→GAA)  exsB ← ExsB family post‑transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP000730785,6770GT 7.3% 370.3 / 3.1 125A27E (GCA→GAA) exsBExsB family post‑transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base G (49/65);  new base T (9/2);  total (58/67)
Fisher's exact test for biased strand distribution p-value = 2.32e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 128 total aligned reads displayed.

TGTGATAATAATGACATATCTAAAACGTGATGTTTCATTCCTTGATCTTGTGCAATTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAATAATATTAATAAAGAGGTTAATGGCATTGATAAGCCCG  >  CP000730/785539‑785817
                                                                                                                                           |                                                                                                                                            
 gtgtTAATAATGACATATCTAAAACGTGATGTTTCATTCCTTGATCTTGTGCAATTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCAt                                                                                                                                           <  2:673007/141‑1 (MQ=255)
  tgATAATAATGACATATCTAAAACGTGATGTTTAATTCCTTGCTATTGTGCAATTTGTTTTGCGACTTCAATTTTAGAATCATTTATTTGGCCATAATTAAACGTGACGAGATCAACTTCGGTGAACTGTATTGTTGCATa                                                                                                                                          >  2:586847/1‑141 (MQ=255)
        taatGACATATCTAAAACGTGATGTTTCATTCCTTGATCTTGTGCAATTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAagag                                                                                                                                    <  1:881194/141‑1 (MQ=255)
         aatGACATATCTAAAACGTGATGTTTCATTCCTTGATCTTGTGCAATTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAgaga                                                                                                                                   <  2:905643/141‑1 (MQ=255)
                tatCTAAAACGTGATGTTTCATTCCTTGATCTTGTGCAATTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACAtgttg                                                                                                                            <  1:328286/141‑1 (MQ=255)
                tatCTAAAACGTGATGTTTCATTCCTTGATCTTGTGCAATTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACAtgttg                                                                                                                            <  1:1014560/141‑1 (MQ=255)
                tatCTAAAACGTGATGTTTCATTCCTTGATCTTGTGCAATTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACAtgttg                                                                                                                            <  1:879056/141‑1 (MQ=255)
                  tCTAAAACGTGATGTTTCATTCCTTGATCTTGTGCAATTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAAAGATTTTTTGCATAAAAGAAACATGTTGTa                                                                                                                          >  2:498358/1‑141 (MQ=255)
                   cTAAAACGTGATGTTTCCTAGATTGATCTGGTGCAATTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATTTTGTAc                                                                                                                         >  1:265445/1‑141 (MQ=255)
                   cTAAAACGTGATGTTTCATTCCTTGATCTTGTGCAATTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCTACTTTTTGTTAATGTTTTTTTGCATAAAAGAGACATGTTGTAc                                                                                                                         >  1:852033/1‑141 (MQ=255)
                     aaaaCGTTACGTTTCATTCCTTTATCTTGTGCAATTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGGACTg                                                                                                                       <  2:766997/141‑1 (MQ=255)
                     aaaaCGTGATGTTTCATTCCTTGATCTTGTGCAATTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTAcgt                                                                                                                       >  2:168163/1‑139 (MQ=255)
                     aaaaCGTGATGTTTCATTCCTTGATCTTGTGCAATTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTg                                                                                                                       <  2:934347/141‑1 (MQ=255)
                       aaCGTGATGTTTCATTCCTTGATCTTGTGCAATTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTc                                                                                                                     <  2:851458/141‑1 (MQ=255)
                         ggTGAGGTTTCAGTGCTTGATCTTGTGCAATGTGTTTTGCGACTTCAATGTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAAGGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCtt                                                                                                                   <  2:450509/140‑1 (MQ=255)
                         cGTGATGTTTCATTCCTTGATCTTGTGCAATTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCtt                                                                                                                   <  1:1004905/141‑1 (MQ=255)
                          gTGATGTTTCATTCCTTGATCTTGTGCAATTTGTTTTGCGACTTCAATTTCAGTATATTATCTTTGGCAATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTg                                                                                                                  <  1:803259/141‑1 (MQ=255)
                           tGATGTTTCATTCCTTGATCTTGTGCAATTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCttta                                                                                                                 >  2:408587/1‑139 (MQ=255)
                            gATGTTTCATTCCTTGATCTTGTGCAATTTGTTTTGCGACTTCAATTTCAGTAAAATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGac                                                                                                                >  1:258413/1‑141 (MQ=255)
                                tttCATTCCTTGATCTTGTGCAATTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGTTTTTTTTTGACATGTTGTACTGTCTTGacctcc                                                                                                            >  2:880816/1‑141 (MQ=255)
                                tttCATTCCTTGATCTTGTGCAATTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAACGAGACATGTTGTACTGTCTTGaccacc                                                                                                            >  1:436630/1‑141 (MQ=255)
                                      tCCTTGACCCTGTGCAATTTGGTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTaaa                                                                                                      <  1:42506/141‑1 (MQ=255)
                                       ccTTGATCTTGTGCAATTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTTTTTTTTTTTGATATGTTGTACTGTCTTGACCACCACTGAAg                                                                                                     >  2:111508/1‑141 (MQ=255)
                                       ccTTGATCTTGTGCAATTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGCTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAg                                                                                                     >  1:76214/1‑141 (MQ=255)
                                         ttGATCTTGTGCAATTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGAc                                                                                                   <  2:366084/141‑1 (MQ=255)
                                         ttGATCTTGTGCAATTTGTTTTGCGACCTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGAc                                                                                                   <  1:570958/141‑1 (MQ=255)
                                         aggATCTTGTGCAATTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGTCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATCTTTTTTTGCATAAAAAAGACATGTTGTACTATCTTGCCCACCACTAAAGAc                                                                                                   >  2:407704/3‑141 (MQ=255)
                                            aTCTTGTGCAATTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAAc                                                                                                >  1:11865/1‑141 (MQ=255)
                                               ttGTGCAATTTGTTTTGCGACTTCTATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGAt                                                                                             <  2:691559/141‑1 (MQ=255)
                                                tgtgCAATTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTTTATTTAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATg                                                                                            >  2:613349/1‑141 (MQ=255)
                                                  tgCAATTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGc                                                                                          <  2:440643/141‑1 (MQ=255)
                                                    ttaTTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGTGACATGTTGTACTGTTTTGACCACCTCTAAAGGCAACGATGGCtt                                                                                        <  2:188430/139‑1 (MQ=255)
                                                        ttGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCtttttt                                                                                    >  2:624261/1‑140 (MQ=255)
                                                           ttttGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACAACCACTAAAGACAACGATGGCTTTTTCagt                                                                                 >  1:60843/1‑139 (MQ=255)
                                                            tttGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTTTTTATATTTGACATGTTGTACTGTCTTGACTACCATTAAGGACAACACTGGTTTTTTCattt                                                                                >  2:164407/1‑140 (MQ=255)
                                                            tttGCGACTTCAATTTCAGTATCATGTCTATGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCCCTAACGACAACGATGGCTTTTTCttta                                                                                >  2:236132/1‑141 (MQ=255)
                                                             ttGCGACTTCAATTCCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCattat                                                                               <  1:998832/141‑1 (MQ=255)
                                                              tGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTTTTTTTTTTTGACATGTTGTACTGTCTTGACCACCACTAATGACAACGATGGCTTTTTCattatt                                                                              >  2:294231/1‑141 (MQ=255)
                                                               gCGACTTCAATTTCAGTATCATTTCTTTGGCCATAATTTAGCGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTCTTTCATTAttt                                                                             <  2:376947/141‑1 (MQ=255)
                                                                  aCTTCAATTGCAGTATCACGTCTTTGGACATAATTAAACCTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACAGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAAt                                                                          <  2:840955/141‑1 (MQ=255)
                                                                    ttCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAAATTTTTTGAAATGGTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATac                                                                        >  1:208359/1‑141 (MQ=255)
                                                                    ttCAATTTCAGTATCAAGCATTAGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATac                                                                        >  1:814803/1‑141 (MQ=255)
                                                                        aTTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACt                                                                     >  1:894856/1‑141 (MQ=255)
                                                                        aTTTCAGTATCATGTCTTTGGCCATAATTAAACATTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACtt                                                                    >  1:1051012/1‑141 (MQ=255)
                                                                         tttCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACttt                                                                   <  2:529728/141‑1 (MQ=255)
                                                                           tCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTcc                                                                 >  1:340325/1‑141 (MQ=255)
                                                                           tCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTcc                                                                 >  2:202101/1‑141 (MQ=255)
                                                                             aGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGAGCACCACTAAAGACAACGATGGCTTTTTCTTTTTTTAATAGACTCTCCAt                                                               >  2:1064979/1‑141 (MQ=255)
                                                                              gTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCAtt                                                              <  2:968916/141‑1 (MQ=255)
                                                                              gTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCAtt                                                              <  1:147418/141‑1 (MQ=255)
                                                                                  cATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGt                                                          <  2:880831/141‑1 (MQ=255)
                                                                                  cATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGt                                                          >  1:910629/1‑141 (MQ=255)
                                                                                  cATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGt                                                          >  1:942638/1‑141 (MQ=255)
                                                                                  cATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGt                                                          >  1:683582/1‑141 (MQ=255)
                                                                                  cATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGt                                                          <  1:178497/141‑1 (MQ=255)
                                                                                  cATGTCTTTGGCCATAATTAAAAGTTTCTAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGt                                                          >  1:535868/1‑141 (MQ=255)
                                                                                  cATGTCTTTCGCTATAATTAAACGTTACGAGTTCAACTTCTTTTAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTTTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGt                                                          <  2:749827/141‑1 (MQ=255)
                                                                                  aaTGTCCTTGGCCATCATTAAACGGTACGAATTCAACTTCTTTGAAATGTTTTTTTGCATATAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGt                                                          <  1:248134/140‑1 (MQ=255)
                                                                                     gTCTTTGGCCATTATTAAACGTTACGAGTTCAACTTCTTTGGTTTTTTTTTTCTTTTACTACTGATTGTTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAAt                                                       <  2:778944/141‑1 (MQ=255)
                                                                                     gTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAAt                                                       <  1:324783/141‑1 (MQ=255)
                                                                                          tGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTc                                                  <  2:441037/141‑1 (MQ=255)
                                                                                          tGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTc                                                  <  2:848014/141‑1 (MQ=255)
                                                                                              cATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCTTAt                                              >  2:1079652/1‑141 (MQ=255)
                                                                                               aTAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTTTTTTTTTTTGACATGTTGTACTGTCTTGACCACCACTAAAGTCAACCAGGGCTTTTTCATTATTCAATTCAATTTCCTGTTTCTCATTGCTCatatt                                             >  2:24095/1‑140 (MQ=255)
                                                                                                tAATTAAACGTTACGAGTTCAACTTCTTTGCAATGTTCTTCTTCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCa                                            <  1:851966/141‑1 (MQ=255)
                                                                                                 aaTTAAACGTTACGAGTTCAACTTGTTTGAAATGTTTTTTTTCATAATAGGGACAGGTTGTACTGTCTTGACAACCACTAAAGATGACGATGGCTTATTCATTATTGAGTTCTCGTTCAATTTTGTAATTTCTCATATCAt                                           >  2:1002619/1‑141 (MQ=255)
                                                                                                     aaaCGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAAAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATtaat                                       >  1:757796/1‑141 (MQ=255)
                                                                                                      aaCGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGTTAGATTGTGCTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATtaata                                      >  1:156503/1‑141 (MQ=255)
                                                                                                      aaCGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCCATAAAAACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATtaata                                      >  2:119024/1‑141 (MQ=255)
                                                                                                      aaCGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCTTTTTGTACTTCCTCCTATCATtaata                                      >  1:864585/1‑141 (MQ=255)
                                                                                                        agTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTaataat                                    <  1:669428/140‑1 (MQ=255)
                                                                                                         cttACGAGTTCAACTTCTTTTTAATGTTTTTTCGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGAAGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAataata                                   <  2:942638/140‑1 (MQ=255)
                                                                                                          ttACGAGTTCAACTTCTTTGAAATGTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAATAGTAtt                                 <  1:755220/141‑1 (MQ=255)
                                                                                                           tACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAATAATAtt                                 <  2:886771/141‑1 (MQ=255)
                                                                                                           tACGAGTTCAACCTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGGTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAATAATAtt                                 <  1:182905/141‑1 (MQ=255)
                                                                                                            aCGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAATAATATta                                >  1:1063139/1‑141 (MQ=255)
                                                                                                             cGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAATAATATtaa                               <  1:338429/141‑1 (MQ=255)
                                                                                                                gTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAATAATATtaataa                            >  1:589344/1‑141 (MQ=255)
                                                                                                                  tCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAATAATATTAATaaaa                          >  2:633298/1‑140 (MQ=255)
                                                                                                                  tCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAATAATATTAATAAag                          <  1:1028124/141‑1 (MQ=255)
                                                                                                                  tCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAATAATATTAATAAag                          <  1:625050/141‑1 (MQ=255)
                                                                                                                  tCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAATAATATTAATAAag                          <  1:1021463/141‑1 (MQ=255)
                                                                                                                     aCTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAATAATATTAATAAAGAgg                       <  1:880816/141‑1 (MQ=255)
                                                                                                                             gAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAAGGATGGCGTTTTCAGGATTTTATACAGTGTCCACGTGGTAAATGCTGTGATGATTAATAATGTTAGTAAAGAGGGTAAttga               >  1:1059117/1‑138 (MQ=255)
                                                                                                                              aaaTGTTTTTTTGCATAAAAGAGACATGTTGTTCTGTCTTGACCACCACTCTAGACAACGATGGCTTTTTCATTATTTAATACACTTTCAATTTTGTAATTGCTCCTTTCATTAATAATATTAATAAAGAGGTTAATGGCa              <  2:729912/141‑1 (MQ=255)
                                                                                                                              aaaTGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAATAATATTAATAAAGAGGTTAATGGCa              <  2:61608/141‑1 (MQ=255)
                                                                                                                              aaaTGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGAGAGCCGTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAATAATATTAATAAAGAGGTTAATGGCa              <  1:1088424/141‑1 (MQ=255)
                                                                                                                                aTGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGCTGTCTTTTTCATTATTTAATACACGTTCCATTTTGTAATTGCTCTTATCATTAATAATATTAATAACGAGTATAATGGCttt            >  1:836236/1‑141 (MQ=255)
                                                                                                                                aTGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAATAATATTAATAAAGATGTTAATGGCAtt            >  1:522463/1‑141 (MQ=255)
                                                                                                                                aTGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAATAATATTAATAAAGAGGTTAATGGCAtt            >  2:518014/1‑141 (MQ=255)
                                                                                                                                aTGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAATAATATTAATAAAGAGGTTAATGGCAtt            >  1:537055/1‑141 (MQ=255)
                                                                                                                                    ttttttttCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAATAATATTAATAAAGAGGTTAATGGCATTGAt         <  1:184757/141‑1 (MQ=255)
                                                                                                                                    tttttttGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACAATGTCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAATAATATTAATAAAGAGGTTAATGGCATTGAt         <  1:752896/141‑1 (MQ=255)
                                                                                                                                     ttttttGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAATAATATTAATAAAGAGGTTAATGGCATTGATa        >  1:86403/1‑141 (MQ=255)
                                                                                                                                      tttttGCATAAAAGAGATATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAATAATATTAATAAAGAGATTAATGGCATTGATaa       <  1:547748/141‑1 (MQ=255)
                                                                                                                                      tttttGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAATAATATTAATAAAGAGGTTAATGGCATTGATaa       <  1:375734/141‑1 (MQ=255)
                                                                                                                                      ttttcGCATAAATGAGACATGTTGTACTGTCTTGACCACCACTACAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCAATTTGTAATTGCTCCTATCATTAATAATATTAATAGAGAGGTTACTGGCATTGATaa       <  1:571472/141‑1 (MQ=255)
                                                                                                                                        tttGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAATAATATTAATAAAGAGGTTAATGGCATTGATAAGc     <  2:683582/141‑1 (MQ=255)
                                                                                                                                         ttGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAATAATATTAATAAAGAGGTTAATGGCATTGATAAGcc    >  1:977561/1‑141 (MQ=255)
                                                                                                                                           gCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAATAATATTAATAAAGAGGTTAATGGCATTGATAAGCCCg  <  2:11865/141‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                            
TGTGATAATAATGACATATCTAAAACGTGATGTTTCATTCCTTGATCTTGTGCAATTTGTTTTGCGACTTCAATTTCAGTATCATGTCTTTGGCCATAATTAAACGTTACGAGTTCAACTTCTTTGAAATGTTTTTTTGCATAAAAGAGACATGTTGTACTGTCTTGACCACCACTAAAGACAACGATGGCTTTTTCATTATTTAATACACTTTCCATTTTGTAATTGCTCCTATCATTAATAATATTAATAAAGAGGTTAATGGCATTGATAAGCCCG  >  CP000730/785539‑785817

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: