New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	855629 =	100 (1.270)	3 (0.070) +TCCCATTGGCATTTACGAAGTTTAAATGTGCAATTAGAATATATGTATAACAATATT	3/162	8.8	5.5%	intergenic (+160/+29)	USA300HOU_0799/USA300HOU_0800	hypothetical protein/hypothetical protein
	?	CP000730	2830190 =	76 (0.970)					intergenic (+18/+173)	icaC/USA300HOU_2670	intercellular adhesion protein C/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTATGACAGACAACACAATTAATTAGGTTGTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACTTGCATTGCCTGTAGAAATTGGGAGGAGCC  >  CP000730/855495‑855768                                                                                                                                       |                                                                                                                                            gTATGACAGACAACACAATTAATTAGGTTGTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGAc                                                                                                                                       >  2:857342/1‑141 (MQ=255) gTATGACAGACAACACAATTAATTAGGTTGTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGAc                                                                                                                                       <  1:656096/141‑1 (MQ=255) gTATGACAGACAACACAATTAATTAGGTTGTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGAc                                                                                                                                       <  2:760003/141‑1 (MQ=255)  tATGACAGACAACACAATTAATTAGGTTGTCTCGAATGTTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACa                                                                                                                                      >  1:682506/1‑141 (MQ=255)  tATGACAGACAACACAATTAATTAGGTTGTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACa                                                                                                                                      <  1:708559/141‑1 (MQ=255)      cgagacaACCTAATTAATTGTGTTGTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGaaa                                                                                                                                  >  1:679538/3‑141 (MQ=255)       cagacaACACAATTAATTAGGTTGTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAAt                                                                                                                                 <  2:210544/141‑1 (MQ=255)       cagacaACACAATTAATTAGGTTGTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAAt                                                                                                                                 <  2:247148/141‑1 (MQ=255)        agacaACACAATTAATTAGGTTGTCTCGAATATGGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATg                                                                                                                                <  1:150588/141‑1 (MQ=255)          acaacaCAATTAATTAGGTTGTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGat                                                                                                                              >  2:399706/1‑141 (MQ=255)             acacAATTAATTAGGTTGTCTCGAATATTGGTTCTTATTTTTATAAGTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATAtt                                                                                                                           >  2:229269/1‑141 (MQ=255)              cacaATTAATTAGGTTGTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATAttt                                                                                                                          >  1:809405/1‑141 (MQ=255)                 aattaattGTGTTGTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCg                                                                                                                       >  1:89470/1‑141 (MQ=255)                  attaattaGGTTGTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGc                                                                                                                      <  1:458589/141‑1 (MQ=255)                   ttaattaGGTTGTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCa                                                                                                                     >  2:192100/1‑141 (MQ=255)                    taattaGGTTGTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCaa                                                                                                                    <  1:200984/141‑1 (MQ=255)                     aattaGGTTGTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCaaa                                                                                                                   <  1:773968/141‑1 (MQ=255)                     aattaGGTTGTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCaaa                                                                                                                   >  1:269825/1‑141 (MQ=255)                     aattaGGTTGTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCaaa                                                                                                                   <  1:792245/141‑1 (MQ=255)                      attaGGTTGTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACTGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCaaaa                                                                                                                  >  2:311539/1‑141 (MQ=255)                      attaGGTTGTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCaaaa                                                                                                                  >  2:311513/1‑141 (MQ=255)                        taGGTTGTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAatt                                                                                                                <  1:857342/141‑1 (MQ=255)                        taGGTTGTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAatt                                                                                                                >  1:442994/1‑141 (MQ=255)                        taGGTTGTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAatt                                                                                                                <  2:173347/141‑1 (MQ=255)                          ggtcgtatagagtgttGGTTCTTATGTTGATAATGGTTAAGTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGAAAAattta                                                                                                              >  2:860561/15‑141 (MQ=255)                          ggTTGTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAattta                                                                                                              >  2:739631/1‑141 (MQ=255)                          ggTTGTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAattta                                                                                                              >  1:289382/1‑141 (MQ=255)                           gTTGTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGGGAGGTGGGACAGAAATGATATTTTCGCAAAatttat                                                                                                             >  1:903873/1‑141 (MQ=255)                              gTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTtc                                                                                                          <  2:374425/141‑1 (MQ=255)                              gTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTtc                                                                                                          <  2:679538/141‑1 (MQ=255)                                ctcGAATATTGGTTCTTATTTTTATAATGGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTtcgt                                                                                                        >  2:828601/1‑141 (MQ=255)                                    aaTATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCgtcgtc                                                                                                    <  1:627143/141‑1 (MQ=255)                                    aaTATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCgtcgtc                                                                                                    <  1:627163/141‑1 (MQ=255)                                          ggTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCAccc                                                                                              >  1:583918/1‑141 (MQ=255)                                           gTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCAcccc                                                                                             >  1:810996/1‑141 (MQ=255)                                            ttCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCa                                                                                            <  1:377148/141‑1 (MQ=255)                                              cTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAAc                                                                                          <  2:6286/141‑1 (MQ=255)                                                 aTTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACttt                                                                                       >  2:764759/1‑140 (MQ=255)                                                  tttttATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTcc                                                                                      >  2:173203/1‑141 (MQ=255)                                                  tttttATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTcc                                                                                      >  2:574835/1‑141 (MQ=255)                                                       ataATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGc                                                                                 >  1:573794/1‑141 (MQ=255)                                                       ataATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGc                                                                                 <  2:582574/141‑1 (MQ=255)                                                          aTTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTg                                                                              <  1:225712/141‑1 (MQ=255)                                                          aTTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTg                                                                              <  1:225379/141‑1 (MQ=255)                                                           ttGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGt                                                                             >  1:502280/1‑141 (MQ=255)                                                            tGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTa                                                                            >  1:609365/1‑141 (MQ=255)                                                            tGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTa                                                                            >  1:538046/1‑141 (MQ=255)                                                             gTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAg                                                                           <  1:376467/141‑1 (MQ=255)                                                             gTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAg                                                                           <  2:776846/141‑1 (MQ=255)                                                             gTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTACCACCCCAACTTCCATTTCCTGTAg                                                                           <  2:91075/141‑1 (MQ=255)                                                                aaTTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGaaa                                                                        <  1:721679/141‑1 (MQ=255)                                                                   tAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTg                                                                     <  2:585693/141‑1 (MQ=255)                                                                     ggggAGAGATGATACTTACACAGTTAGTTATCTATTTGACGGATAGTGACATTTATTTGGAGTGAGGGGGGACAGAGATGATAATTTCGCAAGAGTTATTTCGGAGTCCCACCCCAACTTCCATTGCCTGTGGAGACTGGa                                                                   >  2:398551/1‑141 (MQ=255)                                                                      gggAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACACCATCTTCCATTGCCTGTAGAAATTGGaa                                                                  <  2:141938/141‑1 (MQ=255)                                                                        gagagaTGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAAt                                                                <  1:184793/141‑1 (MQ=255)                                                                          gagaTGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATcc                                                              >  1:275113/1‑141 (MQ=255)                                                                             atgatACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGATTTCCAAt                                                           <  1:399706/141‑1 (MQ=255)                                                                              tgatACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAAtt                                                          >  2:505330/1‑141 (MQ=255)                                                                               gatACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGACATCCAAttt                                                         <  1:801530/141‑1 (MQ=255)                                                                                 tACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGCAATTGGAAATCCAATTtct                                                       >  1:392626/1‑141 (MQ=255)                                                                                      aaaTAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATg                                                  <  1:373306/141‑1 (MQ=255)                                                                                      aaaTAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATg                                                  >  2:432185/1‑141 (MQ=255)                                                                                      aaaTAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATg                                                  <  1:373615/141‑1 (MQ=255)                                                                                       aaTAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGt                                                 <  1:811370/141‑1 (MQ=255)                                                                                        aTAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGtt                                                <  1:739631/141‑1 (MQ=255)                                                                                        aTAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGtt                                                <  1:24007/141‑1 (MQ=255)                                                                                          agttagttATTTATTTTACGGATAGTGAACTTAATTATGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTgg                                              >  1:485657/1‑141 (MQ=255)                                                                                           gttagttaTTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTggg                                             <  1:416837/141‑1 (MQ=255)                                                                                               gttaTTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGccc                                         >  1:620133/1‑141 (MQ=255)                                                                                                ttatttatTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGcccc                                        <  1:319154/141‑1 (MQ=255)                                                                                                     tatttTACGGATAGTGAAATTTATTTTGAGTGAGTTTTGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCTACTTCTATTGCCTGTAGAAATTTTAAATCCAATTTATCTATATTGGCGtccctcacc                                   >  2:70185/1‑136 (MQ=18)                                                                                                     tatttTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCACTTTCTCTATGTTGGGGccccacccc                                   >  2:862038/1‑141 (MQ=255)                                                                                                        tttACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCTACTTCCATTGCCTGTAGAAATTGGAAATCCATTTGCGCTATGTTGGGGCCCCACCCCAAc                                <  2:142661/141‑1 (MQ=255)                                                                                                         ttACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACt                               >  1:820181/1‑141 (MQ=255)                                                                                                         ttACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACt                               >  1:873105/1‑141 (MQ=255)                                                                                                         ttACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACt                               >  1:873294/1‑141 (MQ=255)                                                                                                          tACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACtt                              <  2:836510/141‑1 (MQ=255)                                                                                                          tACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTGTCGCAAAATGTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAACTCCAATTTCTCTATGTTGGGGCCCCACGCCAAcgt                              <  2:682506/141‑3 (MQ=255)                                                                                                           aCGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACTTg                             >  2:385453/1‑141 (MQ=255)                                                                                                            cGGATAGTGAAATTTATTCTGAGTGATGTTGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACtttc                            >  2:419201/1‑139 (MQ=255)                                                                                                             ggATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCCCCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACTTGCa                           <  1:229269/141‑1 (MQ=255)                                                                                                             ggATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACTTGCa                           <  1:905665/141‑1 (MQ=255)                                                                                                               aTAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACTTGCAtt                         >  2:413078/1‑141 (MQ=255)                                                                                                                  gTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACTTGCATTGcc                      >  1:440309/1‑141 (MQ=255)                                                                                                                   tGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACTTGCATTGCCt                     >  2:87649/1‑141 (MQ=255)                                                                                                                    gAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACTTGCATTGCCTg                    <  1:526755/141‑1 (MQ=255)                                                                                                                       atttatttTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACTTGCATTGCCTGTAg                 <  2:502280/141‑1 (MQ=255)                                                                                                                          tatttTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATGTCTCTATGTTGGGGCCCCACCCCAACTTGCATTGCCNGTCGaga              >  2:684199/1‑139 (MQ=255)                                                                                                                          tatttTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCATGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACTTGCATTGCCTGTAGaaa              <  1:666634/141‑1 (MQ=255)                                                                                                                          tattatGAGGGAGGTCGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTAGAAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACTTGCATTGCCTGTAGaaa              <  2:776049/141‑1 (MQ=255)                                                                                                                              ttGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACTTGCATTGCCTGTAGAAATTgg          >  2:102959/1‑141 (MQ=255)                                                                                                                              ttGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACTTGCATTGCCTGTAGAAATTgg          >  2:562929/1‑141 (MQ=255)                                                                                                                                gagtgagGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACTTGCATTGCCTGTAGAAATTGgga        >  2:816595/1‑141 (MQ=255)                                                                                                                                gagtgagGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACTTGCATTGCCTGTAGAAATTGgga        >  2:499651/1‑141 (MQ=255)                                                                                                                                gagtgagGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACTTGCATTGCCTGTAGAAATTGgga        >  1:75114/1‑141 (MQ=255)                                                                                                                                 agtgagGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGCAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACTTGCATTCACTGTAGAATTTGggag       >  2:623458/1‑141 (MQ=255)                                                                                                                                     agGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACTTGCATTGCCTGTAGAAATTggctcctcc   <  1:311513/141‑8 (MQ=255)                                                                                                                                     agGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACTTGCATTGCCTGTAGAAATTggctcctcc   <  1:311539/141‑8 (MQ=255)                                                                                                                                      ggTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACTTGCATTGCCTGTAGAAATTGGGAGGAGcc  <  1:251394/141‑1 (MQ=255)                                                                                                                                      ggTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACTTGCATTGCCTGTAGAAATTGGGAGGAGcc  <  1:838327/141‑1 (MQ=255)                                                                                                                                       |                                                                                                                                            GTATGACAGACAACACAATTAATTAGGTTGTCTCGAATATTGGTTCTTATTTTTATAATTGTTAATTAGGGGAGAGATGATACTTAAATAGTTAGTTATTTATTTTACGGATAGTGAAATTTATTTTGAGTGAGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTCCATTGCCTGTAGAAATTGGAAATCCAATTTCTCTATGTTGGGGCCCCACCCCAACTTGCATTGCCTGTAGAAATTGGGAGGAGCC  >  CP000730/855495‑855768

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.