BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	2830190 =	76 (0.970)	3 (0.060) +AATATTGTTATACATATATTCTAATTGCACATTTAAACTTCGTAAATGCCAAT	3/170	9.2	5.2%	intergenic (+18/+173)	icaC/USA300HOU_2670	intercellular adhesion protein C/hypothetical protein
*	?	CP000730	2866774 =	101 (1.290)		3/170	9.2	5.2%	intergenic (‑173/+280)	USA300HOU_2711/noc	hypothetical membrane protein/possible transcriptional regulator
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 101 total aligned reads displayed.

AAAACGTATCATTCACACAAAGTGTAAAACTTAAATTTTCTACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATA  >  CP000730/2866635‑2866912

aaaaCGTATCATTCACACAAAGTGTAAAACTTAAATTTTCTACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAgg                                                                                                                                           >  2:147982/1‑141 (MQ=255)

aaaaCGTATCATTCACACAAAGTGTAAAACTTAAATTTTCTACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAgg                                                                                                                                           >  2:325109/1‑141 (MQ=255)

aaaaCGTATCATTCACACAAAGTGTAAAACTTAAATTTTCTACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAgg                                                                                                                                           >  2:79828/1‑141 (MQ=255)

 aaaCGTATCATTCACACAAAGTGTAAAACTTAAATTTTCTACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAggg                                                                                                                                          >  1:643914/1‑141 (MQ=255)

      tATCATTCACACAAAGTGTAAAACTTAAATTTTCTACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTgg                                                                                                                                     <  1:718162/141‑1 (MQ=255)

       aTCATTCACACAAAGTGTAAAACTTAAATTTTCTACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTggg                                                                                                                                    >  2:35357/1‑141 (MQ=255)

        tCATTCACACAAAGTGTAAAACTTAAATTTTCTACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGa                                                                                                                                   <  2:781064/141‑1 (MQ=255)

            tCACACAAAGTGTAAAACTTAAATTTTCTACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGa                                                                                                                               >  2:72643/1‑141 (MQ=255)

                  aaaGTGTAAAACTTAAATTTTCTACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGat                                                                                                                         >  1:848559/1‑141 (MQ=255)

                   aaGTGTAAAACTTAAATTTTCTACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGata                                                                                                                        <  2:486191/141‑1 (MQ=255)

                         aaaaCTTAAATTTTCTACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCg                                                                                                                  >  2:358926/1‑141 (MQ=255)

                         aaaaCTTAAATTTTCTACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCg                                                                                                                  >  1:790522/1‑141 (MQ=255)

                            acgtAAATTTTCTACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCaa                                                                                                               <  2:176996/138‑1 (MQ=255)

                               tAAATTTTCTACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAGat                                                                                                            >  1:94427/1‑141 (MQ=255)

                               tAAATTTTCTACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAat                                                                                                            <  1:110644/141‑1 (MQ=255)

                                aaaTTTTCTACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAatt                                                                                                           >  2:157929/1‑141 (MQ=255)

                                aaaTTTTCTACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGAGATTTTCGCAAAatt                                                                                                           <  1:447619/141‑1 (MQ=255)

                                 aaTTTTCTACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAattt                                                                                                          >  1:705905/1‑141 (MQ=255)

                                 aaTTTTCTACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAattt                                                                                                          >  1:705861/1‑141 (MQ=255)

                                  aTTTTCTACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAattta                                                                                                         >  2:481725/1‑141 (MQ=255)

                                   ttttCTACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAatttat                                                                                                        <  1:101801/141‑1 (MQ=255)

                                      tCTACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTtc                                                                                                     >  2:826130/1‑141 (MQ=255)

                                       cTACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAGGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTtcg                                                                                                    >  1:825905/1‑141 (MQ=255)

                                       cTACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTtcg                                                                                                    >  2:437195/1‑141 (MQ=255)

                                        tACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTtcgt                                                                                                   <  1:779764/141‑1 (MQ=255)

                                         aCTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTtcgtc                                                                                                  >  1:699182/1‑141 (MQ=255)

                                           tGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTGTTTcgtcgt                                                                                                <  1:804734/141‑1 (MQ=255)

                                           tGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTcgtcgt                                                                                                <  1:622163/141‑1 (MQ=255)

                                                   cAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCAcccc                                                                                        <  2:354333/141‑1 (MQ=255)

                                                    aaCTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCa                                                                                       >  2:384803/1‑141 (MQ=255)

                                                     aCTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTCGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAg                                                                                      >  2:773795/1‑141 (MQ=255)

                                                     aCTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAg                                                                                      >  2:2218/1‑141 (MQ=255)

                                                     aCTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAg                                                                                      <  1:740112/141‑1 (MQ=255)

                                                     aCTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAg                                                                                      >  1:20974/1‑141 (MQ=255)

                                                     aCTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCACAAAATTTATTTCGTCGTCCCACCCCAg                                                                                      >  1:578325/1‑141 (MQ=255)

                                                      cTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGc                                                                                     >  2:294833/1‑141 (MQ=255)

                                                       tCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCa                                                                                    <  1:419726/141‑1 (MQ=255)

                                                        cAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCaa                                                                                   <  1:116175/141‑1 (MQ=255)

                                                         aaGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAg                                                                                  >  1:705599/1‑141 (MQ=255)

                                                         aaGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAg                                                                                  >  1:808551/1‑141 (MQ=255)

                                                           gCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGt                                                                                >  2:137668/1‑141 (MQ=255)

                                                           gCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGt                                                                                >  1:243310/1‑141 (MQ=255)

                                                           gCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGt                                                                                <  2:623846/141‑1 (MQ=255)

                                                             gATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTg                                                                              <  1:255815/141‑1 (MQ=255)

                                                               tGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGAc                                                                            >  1:869209/1‑141 (MQ=255)

                                                                 ttCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTa                                                                          <  1:572232/141‑1 (MQ=255)

                                                                  tCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAg                                                                         >  2:67954/1‑141 (MQ=255)

                                                                  tCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAg                                                                         >  1:705272/1‑141 (MQ=255)

                                                                  tCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAg                                                                         >  1:375262/1‑141 (MQ=255)

                                                                  tCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGCTCAAATGACAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTCCGTCGTCCCACCCCAGCAAGGTCGACTAg                                                                         >  2:40227/1‑141 (MQ=255)

                                                                   cATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGa                                                                        >  2:111359/1‑141 (MQ=255)

                                                                         gCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGaa                                                                  <  1:553828/141‑1 (MQ=255)

                                                                           tttCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGaaaa                                                                <  1:484747/141‑1 (MQ=255)

                                                                           tttCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGaaaa                                                                <  1:893651/141‑1 (MQ=255)

                                                                            ttCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGaaaaa                                                               <  1:329311/141‑1 (MQ=255)

                                                                             tCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGaaaaaa                                                              >  1:287255/1‑141 (MQ=255)

                                                                             tCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGaaaaaa                                                              >  2:673010/1‑141 (MQ=255)

                                                                              cATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAg                                                             >  1:176168/1‑141 (MQ=255)

                                                                               aTGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGc                                                            <  1:257741/141‑1 (MQ=255)

                                                                                tGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCt                                                           >  1:108840/1‑141 (MQ=255)

                                                                                      tttCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTAc                                                     <  2:215353/141‑1 (MQ=255)

                                                                                      tttCATAAACTAAAAAAAAAAGGTAAAAATGAAAGTATATCCAGCTTAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTAAAAAAAAAAAAAAAAAGCTTGTTAc                                                     <  2:215204/141‑1 (MQ=18)

                                                                                       ttCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACa                                                    <  1:372826/141‑1 (MQ=255)

                                                                                            aaaCTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAgcgc                                               <  1:212569/141‑1 (MQ=255)

                                                                                              aCTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCAt                                             <  1:742687/141‑1 (MQ=255)

                                                                                               cTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCAtt                                            >  1:603850/1‑141 (MQ=255)

                                                                                               cTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCAtt                                            >  2:758472/1‑141 (MQ=255)

                                                                                               cTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCAtt                                            >  1:355247/1‑141 (MQ=255)

                                                                                               cTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCAtt                                            >  1:604205/1‑141 (MQ=255)

                                                                                               cTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCAtt                                            >  2:432684/1‑141 (MQ=255)

                                                                                                 aGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCAtttt                                          <  1:258281/141‑1 (MQ=255)

                                                                                                 aGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCAtttt                                          <  1:507921/141‑1 (MQ=255)

                                                                                                  gCAATAAAGGGTTCAAATGAAAGTATATCCGGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTc                                         >  2:728718/1‑141 (MQ=255)

                                                                                                  gCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTc                                         <  2:373551/141‑1 (MQ=255)

                                                                                                   cAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCg                                        >  1:449702/1‑141 (MQ=255)

                                                                                                   cAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCg                                        >  1:664539/1‑141 (MQ=255)

                                                                                                     aTAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGtt                                      >  1:613677/1‑141 (MQ=255)

                                                                                                         aGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGt                                  >  2:381104/1‑141 (MQ=255)

                                                                                                          gggTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTc                                 <  2:665007/141‑1 (MQ=255)

                                                                                                          gggTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTc                                 <  2:287646/141‑1 (MQ=255)

                                                                                                          gggTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTc                                 >  1:570418/1‑141 (MQ=255)

                                                                                                             ttCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAac                              <  1:539140/141‑1 (MQ=255)

                                                                                                             ttCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAac                              >  2:836091/1‑141 (MQ=255)

                                                                                                              tCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAact                             <  1:599983/141‑1 (MQ=255)

                                                                                                              tCAAATGAAAGCATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAact                             >  2:730155/1‑141 (MQ=255)

                                                                                                                   tGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAg                                                  <  1:152021/115‑1 (MQ=255)

                                                                                                                   tGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAg                                                  >  2:152021/1‑115 (MQ=255)

                                                                                                                      aaGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCaa                     >  2:131046/1‑141 (MQ=255)

                                                                                                                         tataTCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAatat                  >  1:533887/1‑141 (MQ=255)

                                                                                                                         tataTCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAatat                  >  2:692707/1‑141 (MQ=255)

                                                                                                                            atCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAAc               <  1:35357/141‑1 (MQ=255)

                                                                                                                            atCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAAc               <  1:705400/141‑1 (MQ=255)

                                                                                                                             tCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACt              <  1:826130/141‑1 (MQ=255)

                                                                                                                                aGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCg           <  1:387430/141‑1 (MQ=255)

                                                                                                                                      aaTTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATTACTTCGTAGAGc     >  2:180235/1‑141 (MQ=255)

                                                                                                                                      aaTTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGc     >  2:243195/1‑141 (MQ=255)

                                                                                                                                       aTTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCa    >  2:696498/1‑141 (MQ=255)

                                                                                                                                       aTTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCa    <  1:21521/141‑1 (MQ=255)

                                                                                                                                       aTTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCa    >  2:303178/1‑141 (MQ=255)

                                                                                                                                         tAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATa  >  1:205824/1‑141 (MQ=255)

AAAACGTATCATTCACACAAAGTGTAAAACTTAAATTTTCTACTGTAAAGGCAACTCAAGCGATGTTCATAAAGCTTTCATGATACTTTCATAAACTAGCAATAAAGGGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATA  >  CP000730/2866635‑2866912

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.