New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 1205323	75 (0.960)	36 (0.630) +AGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAG	12/200	5.5	40.5%	intergenic (+459/‑365)	yfiE/lspA	possible lactoylglutathione lyase/A8 family signal peptidase II
	?	CP000730	2478252 =	71 (0.900)					intergenic (+139/+932)	USA300HOU_2340/htrB	hypothetical membrane protein/hemin ABC superfamily ATP binding cassette transporter, ABC protein
Rejected: Coverage evenness skew score above cutoff.

TCCACAAACAAACTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATCCTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCTATAAATAGAATTTTTGATGACGG  >  CP000730/2478114‑2478389                                                                                                                                            |                                                                                                                                          tCCACAAACAAACTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATCCTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAAc                                                                                                                                         >  2:263651/1‑141 (MQ=255) tCCACAAACAAACTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATCCTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAAc                                                                                                                                         >  1:205147/1‑141 (MQ=255)     caaacaaaCTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATCCTTGATTAGACAATTGTTATATTGAAAATAAATAACCTAAAGCGTCTGGGACATTAATCCCT‑AAAAAAAAcagca                                                                                                                                     >  1:710842/1‑141 (MQ=255)           aacTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATCCTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGa                                                                                                                               <  1:825189/141‑1 (MQ=255)            acTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATCCTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGAt                                                                                                                              >  2:659278/1‑141 (MQ=255)            acTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATCCTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGAt                                                                                                                              >  2:348990/1‑141 (MQ=255)             cTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATCCTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATa                                                                                                                             >  2:504476/1‑141 (MQ=255)               attattatAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATCCTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAAt                                                                                                                           >  1:203964/1‑141 (MQ=255)               attattatAGGTTGTTTCTAATATAGCGTCAAACTATCTTTAAATATTCGTTAATCCTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAAt                                                                                                                           >  2:768610/1‑141 (MQ=255)                           tgttTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATCCTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGaa                                                                                                               <  2:623869/141‑1 (MQ=255)                           tgttTCTAATATTGCGTCAAACTATCATTAAATATTCGTTAAACCATGATTAGACAAGTGTTATAGTGAAAATAAATAAACTCCAGTGACTGGGACATAAATCCAT‑AAAAAAAACAGCAGTATGGTAATTTTCAGTTAGaa                                                                                                               <  2:102453/141‑1 (MQ=255)                           tgtgTCTAAGATTGCGTCAAAGTATCTTTAAATATTCGTTAATCCTTGATTAGACAATTGTTAAATTGAAAAGAAATAAACGAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGaa                                                                                                               <  2:314134/141‑1 (MQ=38)                              ttCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATCCTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAat                                                                                                            <  1:14847/141‑1 (MQ=255)                                   atatTGCGTCAAACTATCTTTAAATATTCGTTAATCCTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCtt                                                                                                       >  1:824080/1‑141 (MQ=255)                                           tCAAACTATCTTTAAATATTGATTAAACCTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGTGAAAAAAAAAAAA‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGt                                                                                               <  2:661302/141‑1 (MQ=25)                                                   tCTTTAAATATTCGTTAATCCTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTAtt                                                                                       >  2:319485/1‑141 (MQ=255)                                                     tttAAATATTCGTTAATCCTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTta                                                                                     >  2:172176/1‑141 (MQ=255)                                                         aataatCGTAAAACCTTTATAAGACAATTGTTATATTGAAAAAAAATAAACTAAAGATTCTGTGACATTAAAAAAA‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACa                                                                                 <  2:281278/141‑1 (MQ=18)                                                          atatTCGTTAATCCTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACaa                                                                                >  1:744774/1‑141 (MQ=255)                                                              tCGTTAATCCTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACt                                                                            >  1:329334/1‑141 (MQ=255)                                                                gTTAATCCTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTc                                                                          <  1:211542/141‑1 (MQ=255)                                                                 ttAATCCTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCg                                                                         <  2:336862/141‑1 (MQ=255)                                                                      ccTTGATTAGACAATTNTTATATTGAAAANAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAAGATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTg                                                                    >  1:850790/1‑141 (MQ=255)                                                                        ttGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGAAGTAAAATAATTGTCAATTAGACAATATCTTCCGGCTGTTCTCTAATTATACACTACTTCGTATTgta                                                                  <  2:319913/141‑3 (MQ=255)                                                                         tGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAAt                                                                 <  2:363326/141‑1 (MQ=255)                                                                            ttAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGc                                                              >  2:35018/1‑141 (MQ=255)                                                                            ttAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGc                                                              >  2:679176/1‑141 (MQ=255)                                                                             tAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCt                                                             <  1:602753/141‑1 (MQ=255)                                                                              aGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCtt                                                            >  1:576337/1‑141 (MQ=255)                                                                               gACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTc                                                           <  1:884432/141‑1 (MQ=255)                                                                                 cAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCTAAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCg                                                          >  2:481044/1‑141 (MQ=255)                                                                                            ttGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCt                                              <  2:96762/141‑1 (MQ=255)                                                                                              gAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTgg                                            <  1:185246/141‑1 (MQ=255)                                                                                              gAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTgg                                            <  1:182796/141‑1 (MQ=255)                                                                                                aaataaatAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGca                                          >  2:886594/1‑141 (MQ=255)                                                                                                aaataaatAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGca                                          >  2:834822/1‑141 (MQ=255)                                                                                                    aaataaaCTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACAtt                                      <  2:470/141‑1 (MQ=255)                                                                                                    aaataaaCTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACAtt                                      >  2:826992/1‑141 (MQ=255)                                                                                                      ataaaCTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTAc                                    >  2:569080/1‑141 (MQ=255)                                                                                                         aaCTATAGAGTTTGAGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGTTATGCCCATCTGGCACATTACTGt                                 <  2:371558/141‑1 (MQ=255)                                                                                                         aaCTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGt                                 <  2:571423/141‑1 (MQ=255)                                                                                                         aaCTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGt                                 <  2:612131/141‑1 (MQ=255)                                                                                                           cTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTaa                               >  2:662328/1‑141 (MQ=255)                                                                                                           cTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTaa                               <  1:348990/141‑1 (MQ=255)                                                                                                             aaaGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATCCAAGACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTaaaa                             <  1:440137/141‑1 (MQ=255)                                                                                                             aaaGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTaaaa                             <  1:179774/141‑1 (MQ=255)                                                                                                               agagTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAAtt                           >  1:392709/1‑141 (MQ=255)                                                                                                                gagTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTCTACAATa                                                                              <  1:723673/89‑1 (MQ=255)                                                                                                                gagTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATa                                                                              >  2:723673/1‑89 (MQ=255)                                                                                                                gagTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAGTTc                          >  2:813087/1‑141 (MQ=255)                                                                                                                gagTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTc                          >  1:396381/1‑141 (MQ=255)                                                                                                                gagTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTc                          >  1:189117/1‑141 (MQ=255)                                                                                                                gagTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTc                          >  2:871724/1‑141 (MQ=255)                                                                                                                gagTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTc                          >  1:396571/1‑141 (MQ=255)                                                                                                                 agTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCt                         >  1:208006/1‑141 (MQ=255)                                                                                                                  gTCTTGGACATCAATCTCT‑AAAAAAAACAGCAGTAAGATAATTTTCAAGTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCta                        <  2:77919/141‑1 (MQ=255)                                                                                                                  gTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGCATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCta                        >  1:491795/1‑141 (MQ=255)                                                                                                                     tGGGACATTAATCCCTAAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCtata                      >  2:859498/1‑141 (MQ=255)                                                                                                                      gggACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCTATaaa                    <  2:609009/141‑1 (MQ=255)                                                                                                                       ggACATTAATCCCT‑AAAAAAAACAGTCATAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCtatttat                   <  2:412071/141‑5 (MQ=255)                                                                                                                       ggACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCTATAAAt                   <  1:262309/141‑1 (MQ=255)                                                                                                                          cATTAATCCCTAAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCtatttatag                 <  1:481044/141‑7 (MQ=255)                                                                                                                              aaTCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCTATAAATTGAAttt            >  2:35748/1‑141 (MQ=255)                                                                                                                              aaTCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCTATAAATAGAAttt            >  1:806836/1‑141 (MQ=255)                                                                                                                                 cccT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCTATAAATAGAATTTTtg         >  2:36580/1‑141 (MQ=255)                                                                                                                                  ccT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCTATAAATAGAATTTTtga        <  2:199160/141‑1 (MQ=255)                                                                                                                                    t‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCTATAAATAGAATTTTtgatg      >  1:471434/1‑141 (MQ=38)                                                                                                                                        aaaaaaCAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACCTTACTGTAAAATTCTATAAATAGAATTTTTGATGACg   <  1:662328/141‑1 (MQ=255)                                                                                                                                        aaaaaaCAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCTATAAATAGAATTTTTGATGACg   >  2:400762/1‑141 (MQ=37)                                                                                                                                        aaaaaaCAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCTATAAATAGAATTTTTGATGACg   <  1:400762/141‑1 (MQ=39)                                                                                                                                         aaaaaCAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCTATAAATAGAATTTTTGATGACgg  <  1:679176/141‑1 (MQ=39)                                                                                                                                            |                                                                                                                                          TCCACAAACAAACTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATCCTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGACATTAATCCCT‑AAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCTATAAATAGAATTTTTGATGACGG  >  CP000730/2478114‑2478389

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.