New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	515911 =	NA (NA)	7 (0.220)	5/262	4.1	NA	noncoding (1206/2921 nt)	rrl1	23S ribosomal RNA
	?	CP000730	515928 =	NA (NA)					noncoding (1223/2921 nt)	rrl1	23S ribosomal RNA
Rejected: Coverage evenness skew score above cutoff.

TGGAAACCTTAGTCAATCGGTGGACGGGATTCTCACCCGTCTTTCGCTACTCACACCGGCATTCTCACTTCTAAGCGCTCCACATGTCCTTACGATCATGCTTCAACGCCCTTAGAACGCTCTCCTACCATTGTCCAAAGGACAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/516056‑515911 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggacaatGGTAGGAGAGCGTTCTAAGGGCGTTGAAGCATGATCGTAAGGACATGTGGAGCGCTTAGAAGTGAGAATGCCGGTGTGAGTAGCGAAAGACGGGTGAGAATCCCGTCCACCGATTGACTAAGGTTTCCAGAGGAAGGCTC  >  CP000730/515928‑516067                                                                                                                                                                                                                                                                                                TGGAAACCTTAGTCAATCGGTGGACGGGATTCTCACCCGTCTTTCGCTACTCACACCGGCATTCTCACTTCTAAGCGCTCCACATGTCCTTACGATCATGCTTCAACGCCCTTAGAACGCTCTCCTACCATTGTCCAAAGG                                                                                                                                                   >  1:309093/1‑141    AAACCTTAGTCAATCGGTGGACGGGATTCTCACCCGTCTTTCGCTACTCACACCGGCATTCTCACTTCTAAGCGCTCCACATGTCCTTACGATCATGCTTCAACGCCCTTAGAACGCTCTCCTACCATTGTCCAAAGGACA                                                                                                                                                >  1:229060/1‑141    AAACCTTAGTCAATCGGTGGACGGGATTCTCACCCGTCTTTCGCTACTCACACCGGCATTCTCACTTCTAAGCGCTCCACATGTCCTTACGATCATGCTTCAACGCCCTTAGAACGCTCTCCTACCATTGTCCAAAGGACA                                                                                                                                                >  1:222943/1‑141      ACCTTAGTCAATCGGTGGACGGGATTCTCACCCGTCTTTCGCTACTCACACCGGCATTCTCACTTCTAAGCGCTCCACATGTCCTTACGATCATGCTTCAACGCCCTTAGAACGCTCTCCTACCATTGTCCAAAGGACAAT                                                                                                                                              >  2:388027/1‑141      ACCTTAGTCAATCGGTGGACGGGATTCTCACCCGTCTTTCGCTACTCACACCGGCATTCTCACTTCTAAGCGCTCCACATGTCCTTACGATCATGCTTCAACGCCCTTAGAACGCTCTCCTACCATTGTCCAAAGGACAAT                                                                                                                                              >  2:162164/1‑141      ACCTTAGTCAATCGGTGGACGGGATTCTCACCCGTCTTTCGCTACTCACACCGGCATTCTCACTTCTAAGCGCTCCACATGTCCTTACGATCATGCTTCAACGCCCTTAGAACGCTCTCCTACCATTGTCCAAAGGACAAT                                                                                                                                              <  1:107709/141‑1                                                                                                   TGCTTCAACGCCCTTAGAACGCTCTCCTACCATTGTCCAAAGGACAATGGTAGGAGAGCGTTCTAAGGGCGTTGAAGCATGATCGTAAGGACATGTGGAGCGCTTAGAAGTGAGAATGCCGGTGTGAGTAGCGAAAGACGG                                                 >  1:203888/1‑141                                                                                                               CTTAGAACGCTCTCCTACCATTGTCCAAAGGACAATGGTAGGAGAGCGCTCTAAGGGCGTTGAAGCATGATCGTAAGGACATGTGGAGCGCTTAGGAGTGAGACTGCCGGTGTGAGTAGCGAACGACGGGTGAGAATCCCG                                     >  2:375462/1‑141                                                                                                                         TCTCCTACCATTGTCCAAAGGACAATGGTAGGAGAGCGTTCTAAGGGCGTTGAAGCATGATCGTAAGGACATGTGGAGCGCTTAGAAGTGAGAATGCCGGTGTGAGTAGCGAAAGACGGGTGAGAATCCCGTCCACCGATT                           >  1:19975/1‑141                                                                                                                                    TGTCCAAAGGACAATGGTAGGAGAGCGTTCTAAGGGCGTTGAAGCATGATCGTAAGGACATGTGGAGCGCTTAGAAGTGAGAATTCCGGTGTGAGTAGCGAAAGACGGGTGAGAATCCCGTCCACCGATTGACTAAGGTTT                <  1:307791/141‑1                                                                                                                                         AAAGGACAATGGTAGGAGAGCGTTCTAAGGGCGTTGAAGCATGATCGTAAGGACATGTGGAGCGCTTAGAAGTGAGAATGCCGGTGTGAGTAGCGAAAGACGGGTGAGAATCCCGTCCACCGATTGACTAAGGTTTCCAGA           >  1:155740/1‑141                                                                                                                                         AAAGGACAATGGTAGGAGAGCGTTCTAAGGGCGTTGAAGCATGATCGTAAGGACATGTGGAGCGCTTAGAAGTGAGAATGCCGGTGTGAGTAGCGAAAGACGGGTGAGAATCCCGTCCACCGATTGACTAAGGTTTCCAGA           >  1:215342/1‑141                                                                                                                                         AAAGGACAATGGTAGGAGAGCGTTCTAAGGGCGTTGAAGCATGATCGTAAGGACATGTGGAGCGCTTAGAAGTGAGAATGCCGGTGTGAGTAGCGAAAGACGGGTGAGAATCCCGTCCACCGATTGACTAAGGTTTCCAGA           >  2:59628/1‑141                                                                                                                                             GACAATGGTAGGAGAGCGTTCTAAGGGCGTTGAAGCATGATCGTAAGGACATGTGGAGCGCTTAGAAGTGAGAATGCCGGTGTGAGTAGCGAAAGACGGGTGAGAATCCCGTCCACCGATTGACTAAGGTTTCCAGAGGAA       >  2:178878/1‑141                                                                                                                                               CAATGGTAGGAGAGCGTTCTAAGGGCGTTGAAGCAGGATCGTAAGGATATGTGGAGCGCTTAGAAGTGAGAATGCCGGTGTGAGTAGCGAAAGACGGGTGAGAATCCCGTCCACCGATTGACTAAGGTTTCCAGAGGAAGG     >  1:154713/1‑141                                                                                                                                                AATGGTAGGAGAGCGTTCTAAGGGCGTTGAAGCATGATCGTAAGGACATGTGGAGCGCTTAGAAGTGAGAATGCCGGTGTGAGTAGCGAAAGACGGGTGAG                                            >  1:365900/1‑101                                                                                                                                                AATGGTAGGAGAGCGTTCTAAGGGCGTTGAAGCATGATCGTAAGGACATGTGGAGCGCTTAGAAGTGAGAATGCCGGTGTGAGTAGCGAAAGACGGGTGAG                                            <  2:365900/101‑1                                                                                                                                                 ATGGTAGGAGAGCGTTCTAAGGGCGTTGAAGCATGATCGTAAGGACATGTGGAGCGCTTAGAAGTGAGAATGCCGGTGTGAGTAGC                                                          >  2:304804/1‑86                                                                                                                                                 ATGGTAGGAGAGCGTTCTAAGGGCGTTGAAGCATGATCGTAAGGACATGTGGAGCGCTTAGAAGTGAGAATGCCGGTGTGAGTAGC                                                          <  1:304804/86‑1                                                                                                                                                  TGGTAGGAGAGCGTTCTAAGGGCGTTGAAGCATGATCGTAAGGACATGTGGAGCGCTTAGAAGTGAGAATGCCGGTGTGAGTAGCGAAAGACGGGTGGGAATCCCGTCCACCGATTGACTAAGGTTTCCAGAGGAAGGCTC  >  1:93735/1‑141                                                                                                                                                  TGGTAGGAGAGCGTTCTAAGGGCGTTGAAGCATGATCGTAAGGACATGTGGAGCGCTTAGAAGTGAGAATGCCGGTGTGAGTAGCGAAAGACGGGTGAGAATCCCGTCCACCGATTGACTAAGGTTTCCAGAGGAAGGCTC  >  2:244320/1‑141                                                                                                                                                  TGGTAGGAGAGCGTTCTAAGGGCGTTGAAGCATGATCGTAAGGACATGTGGAGCGCTTAGAAGTGAGAATGCCGGTGTGAGTAGCGAAAGACGGGTGAGAATCCCGTCCACCGATTGACTAAGGTTTCCAGAGGAAGGCTC  >  2:292057/1‑141                                                                                                                                                  TGGTAGGAGAGCGTTCTAAGGGCGTTGAAGCATGATCGTAAGGACATGTGGAGCGCTTAGAAGTGAGAATGCCGGTGTGAGTAGCGAAAGACGGGTGAGAATCCCGTCCACCGATTGACTAAGGTTTCCAGAGGAAGGCTC  >  2:132677/1‑141                                                                                                                                                  TGGTAGGAGAGCGTTCTAAGGGCGTTGAAGCATGATCGTAAGGACATGTGGAGCGCTTAGAAGTGAGAATGCCGGTGTGAGTAGCGAAAGACGGGTGAGAATCCCGTCCACCGATTGACTAAGGTTTCCAGAGGAAGGCTC  >  2:238666/1‑141                                                                                                                                                  TGGTAGGAGAGCGTTCTAAGGGCGTTGAAGCATGATCGTAAGGACATGTGGAGCGCTTAGAAGTGAGAATGCCGGTGTGAGTAGCGAAAGACGGGTGAGAATCCCGTCCACCGATTGACTAAGGTTTCCAGAGGAAGGCTC  >  1:357927/1‑141                                                                                                                                                  TGGTAGGAGAGCGTTCTAAGGGCGTTGAAGCATGATCGTAAGGACATGTGGAGCGCTTAGAAGTGAGAATGCCGGTGTGAGTAGCGAAAGACGGGTGAGAATCCCGTCCACCGATTGACTAAGGTTTCCAGAGGAAGGCTC  >  1:53904/1‑141                                                                                                                                                  TGGTAGGAGAGCGTTCTAAGGGCGTTGAAGCATGATCGTAAGGACATGTGGAGCGCTTAGAAGTGAGAATGCCGGTGTGAGTAGCGAAAGACGGGTGAGAATCCC                                      >  1:60391/1‑105                                                                                                                                                  TGGTAGGAGAGCGTTCTAAGGGCGTTGAAGCATGATCGTAAGGACATGTGGAGCGCTTAGAAGTGAGAATGCCGGTGTGAGTAGCGAAAGACGGGTGAGAATCCC                                      <  2:60391/105‑1                                                                                                                                                                                                                                                                                                TGGAAACCTTAGTCAATCGGTGGACGGGATTCTCACCCGTCTTTCGCTACTCACACCGGCATTCTCACTTCTAAGCGCTCCACATGTCCTTACGATCATGCTTCAACGCCCTTAGAACGCTCTCCTACCATTGTCCAAAGGACAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/516056‑515911 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggacaatGGTAGGAGAGCGTTCTAAGGGCGTTGAAGCATGATCGTAAGGACATGTGGAGCGCTTAGAAGTGAGAATGCCGGTGTGAGTAGCGAAAGACGGGTGAGAATCCCGTCCACCGATTGACTAAGGTTTCCAGAGGAAGGCTC  >  CP000730/515928‑516067

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.