New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 76260 =703 (8.990)7 (0.090) 6/248 NT 1.00% intergenic (+318/‑816) USA300HOU_0072/USA300HOU_0075 universal stress protein/lysophospholipase
?CP000730 76275 = 719 (9.640)intergenic (+333/‑801) USA300HOU_0072/USA300HOU_0075 universal stress protein/lysophospholipase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 817 total aligned reads displayed.

ACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGG  >  CP000730/76120‑76400
                                                                                                                                            |                                                                                                                                             
acacAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTg                                                                                                                                               <  1:797043/141‑1 (MQ=255)
  atgctttttctttcaaatttgatataaaattggggcatcttcttgaacccaacgttagaccgttgaatgatgaacgtttacaccacgttcctttaatattatatatatatcacaataactcaatgcatatcttagatagta                                                                                                                                             <  2:802658‑M1/3‑1 (MQ=255)
   tgctttttcttccaaatttgatataaaattggggcatattcttgaacccaacggtagatcgttgaatgatgaacgtttacaccacgttctcttaatatttcagatatatcacgatagctcaatgcatatattagatagtag                                                                                                                                            <  1:305299‑M1/4‑1 (MQ=255)
   tgctttttcttccaaatttgatataaaattggggcatattcttgaacccaacggtagaccgttgaatgatgaacgtttacaccacgttcccttaatatttcagatatatcacgataactcaatgcatatcttagatagtag                                                                                                                                            <  1:852510‑M1/4‑1 (MQ=255)
    gctttttcttccaaatttgatataaaattggggcatattcttgaacccaacggtagatcgttgaatgatgaacgtttacaccacgttctcttaatatttcagatatatcacgatagctcaatgcatatcttagataATAGc                                                                                                                                           <  2:750195‑M1/5‑1 (MQ=255)
    gctttttcttccaaatttgatataaaattggggcatattcttgaacccaacggtagaccgttgaatgatgaacgtttacaccacgttcccttaatatttcagatatatcacgataactcaatgcatatcttagataGTAGc                                                                                                                                           <  1:271457‑M1/5‑1 (MQ=255)
     ctttttcttccaaatttgatataaaattggggcatattcttgaacccaacggtagatcgttgaatgatgaacgtttacaccacgttctcttaatatttcagatatatcacgatagctcaatgcatatcttagataGTAGcc                                                                                                                                          >  1:604860‑M1/136‑141 (MQ=255)
       ttttcttccaaatttgatataaaattggggcatattcttgaacccaacggtagatcgttgaatgatgaacgtttacaccacgttctcttaatatttcagatatatcacgatagctcaatgcatatcttagataGTAGCCGt                                                                                                                                        >  2:329409‑M1/134‑141 (MQ=255)
          aattaattTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTgg                                                                                                                                     <  1:91458/141‑1 (MQ=255)
          aattaattTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTgg                                                                                                                                     <  1:818384/141‑1 (MQ=255)
          aattaattTAAAAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTTAATCAATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTgg                                                                                                                                     <  2:127178/141‑1 (MQ=255)
                              agtaaatgaGGTTCTGTTGCAAAGTTGAATTTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCAt                                                                                                                 <  1:670086/133‑1 (MQ=11)
                               agttaggaGGTTCTGTTGCAAAGTTGAATTTATAATATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCAtt                                                                                                                >  2:908424/8‑141 (MQ=255)
                                  aatgaGGTTCTGTTGCAAAGTTGAATTTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCGCTGTAGCTGTTGGCTACTATCTAAGATATGCATTggg                                                                                                             >  2:310058/5‑139 (MQ=11)
                                                gCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTGCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGatatat                                                                                               >  2:470518/1‑141 (MQ=25)
                                                       tGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAat                                                                                       <  2:700082/141‑1 (MQ=35)
                                                           tttataatataaTTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTATGATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTa                                                                                   <  2:666111/139‑1 (MQ=11)
                                                           tttataGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATAGTGATATATCTGAAATATTa                                                                                   >  2:888598/3‑141 (MQ=2)
                                                             tataGTATAATTTTAACAAAGAGGAGTCTTCTGTATGAACTATTACAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGCTATGCGTTGAGTTATCGTGATATATCGTGaaacttaag                                                                                  >  2:515065/1‑135 (MQ=11)
                                                             tataGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGTTATGAATTGAGTTATCGTGATATATCTGACATATTAAg                                                                                 >  2:135430/1‑141 (MQ=255)
                                                                aGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGGTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGa                                                                              <  1:482330/141‑1 (MQ=17)
                                                                 atataATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATTTCTGAATTGTTAAgcgta                                                                             >  1:441058/2‑137 (MQ=11)
                                                                   ataATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACg                                                                           >  1:129721/1‑141 (MQ=17)
                                                                   aaaaataaaaaaaaaaGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACg                                                                           <  2:166070/130‑1 (MQ=11)
                                                                    taATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACgt                                                                          >  1:659259/1‑141 (MQ=17)
                                                                     aaTTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACgtg                                                                         >  1:678607/1‑141 (MQ=32)
                                                                      atcttAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACATGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACgtgg                                                                        <  1:890880/138‑1 (MQ=255)
                                                                        tttAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACgtggtg                                                                      <  1:882890/141‑1 (MQ=17)
                                                                        tttAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACgtggtg                                                                      >  2:831767/1‑141 (MQ=17)
                                                                        tttAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACgtggtg                                                                      >  2:114409/1‑141 (MQ=12)
                                                                          tAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTGAGGGAACATGTTGTa                                                                    >  1:501468/1‑141 (MQ=12)
                                                                          tAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTa                                                                    >  1:253292/1‑141 (MQ=17)
                                                                          tAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTa                                                                    >  2:54508/1‑141 (MQ=17)
                                                                          tAAAAAAAAGGTGTTTTTTGTATGAACTATTTCAGATATAATCAATTGAATAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTa                                                                    <  1:786891/141‑1 (MQ=11)
                                                                           aaCAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTaa                                                                   >  1:362786/1‑141 (MQ=17)
                                                                           aaCAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGGGTaa                                                                   >  1:866944/1‑141 (MQ=17)
                                                                           aaCAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTaa                                                                   >  2:36791/1‑141 (MQ=12)
                                                                            aCAAAAAGGAGTCTTCTGTAAGAACTATTTCAGATATAAACAATTTAACAAGGATGTTCTCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCCGAAATATTAAGAGAACGTGGGGTaaa                                                                  >  1:575837/1‑141 (MQ=11)
                                                                             cAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAAc                                                                 >  1:722895/1‑141 (MQ=17)
                                                                              aaaaaGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGGGTTATCCTGGTATATCTGAAATATTAAGGGAACGTGGTGTAAACg                                                                <  1:453035/141‑1 (MQ=255)
                                                                               aaaaGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGt                                                               <  1:286385/141‑1 (MQ=17)
                                                                                aaaGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGtt                                                              >  2:864185/1‑141 (MQ=17)
                                                                                 aaGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTtc                                                             <  1:23710/141‑1 (MQ=12)
                                                                                  aGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTtca                                                            >  2:457591/1‑141 (MQ=17)
                                                                                  aGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTtca                                                            <  2:193586/141‑1 (MQ=12)
                                                                                   ggAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACACGGAAGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTtcat                                                           >  1:182657/1‑141 (MQ=12)
                                                                                     ggTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTtcatca                                                         <  2:60695/140‑1 (MQ=17)
                                                                                     aGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTtcatca                                                         >  2:40986/1‑141 (MQ=12)
                                                                                     aGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTtcatca                                                         >  1:354907/1‑141 (MQ=17)
                                                                                     aGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTtcatca                                                         <  1:831319/141‑1 (MQ=12)
                                                                                      gTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTcatcat                                                        >  1:341922/1‑141 (MQ=17)
                                                                                       tcttctGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCAtt                                                       >  2:627743/1‑141 (MQ=17)
                                                                                       tcttctGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCAtt                                                       >  2:48954/1‑141 (MQ=17)
                                                                                        cttctGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTc                                                      >  1:73029/1‑141 (MQ=17)
                                                                                         ttctGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCa                                                     <  1:223206/141‑1 (MQ=17)
                                                                                            tGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACg                                                  <  2:714179/141‑1 (MQ=17)
                                                                                             gTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACgg                                                 <  2:635292/141‑1 (MQ=17)
                                                                                             gTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACga                                                 <  2:224922/141‑2 (MQ=12)
                                                                                              tATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGt                                                <  2:772197/141‑1 (MQ=17)
                                                                                              tATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGt                                                <  2:557048/141‑1 (MQ=32)
                                                                                                tGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCt                                              >  1:427162/1‑141 (MQ=12)
                                                                                                     tATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGTTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGt                                         <  2:643637/141‑1 (MQ=255)
                                                                                                     tATTTCAGAGATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTAGACCGt                                         <  2:726200/141‑1 (MQ=255)
                                                                                                     cttttCATATATAAACAATTAAACAAGTATGTTATCACTTTCGCTGATGGCTACTATCGTAGCTCTGAAGTGAGTTATCGTGATATATCTGAAATATGAAGGGAACGTGGTGTAAGCGTTCATCATTCAACGGTCGACCgg                                         <  2:294356/139‑2 (MQ=11)
                                                                                                         tCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTGTCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGGTggg                                     <  1:642970/141‑1 (MQ=12)
                                                                                                         tCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTggg                                     <  1:320831/141‑1 (MQ=17)
                                                                                                         tCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAAGGGCGTGTAAACGTTCATCATTCCACGCTCTACCGTTggt                                     >  2:283255/1‑140 (MQ=11)
                                                                                                            gATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTc                                  <  2:589458/141‑1 (MQ=255)
                                                                                                             atatAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCa                                 >  2:791133/1‑141 (MQ=12)
                                                                                                              tataAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCaa                                >  2:878907/1‑141 (MQ=255)
                                                                                                               ataAACAGTTTAACAAGGATGTTATCTCTGTAGGTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTAGACCGTTgaatgatga                               <  2:505599/141‑9 (MQ=11)
                                                                                                               ataAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAg                               <  1:741636/141‑1 (MQ=255)
                                                                                                                 aaaCAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTACACCTCCATCATTCAACGTTCTACCGTTGGGTTCAATaa                             <  2:935346/141‑1 (MQ=11)
                                                                                                                  aaCAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAat                            <  1:767884/141‑1 (MQ=255)
                                                                                                                  aaCAATTTAACAAGGACGTAATCACTGTAGCTGTTGGCCACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTACGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAat                            >  1:526978/1‑141 (MQ=11)
                                                                                                                   aCAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAata                           >  1:119210/1‑141 (MQ=12)
                                                                                                                   aCAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAata                           <  1:101457/141‑1 (MQ=255)
                                                                                                                    cAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAatat                          >  2:815294/1‑141 (MQ=255)
                                                                                                                     aaTTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTCGGGTTCAAGAATATg                         <  1:699341/141‑1 (MQ=11)
                                                                                                                        ttAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGCTATGAGAAGCATTATCGTTCTATATCGTAAATATTAAGGGAACGTGGGGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGccc                      <  1:409537/141‑1 (MQ=11)
                                                                                                                        ttAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGGACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGccc                      >  1:542640/1‑141 (MQ=255)
                                                                                                                          aaCAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCa                    >  1:553276/1‑141 (MQ=12)
                                                                                                                           aCAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAGCGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGGATATGCCCCaa                   >  1:207033/1‑141 (MQ=12)
                                                                                                                           aCAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGACTTTGCCCCaa                   >  2:441509/1‑141 (MQ=12)
                                                                                                                           aCAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCaa                   >  1:164493/1‑141 (MQ=17)
                                                                                                                           aCAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCaa                   >  2:844345/1‑141 (MQ=17)
                                                                                                                           aCAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCaa                   >  1:381911/1‑141 (MQ=255)
                                                                                                                                gATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTta              <  2:396413/141‑1 (MQ=255)
                                                                                                                                 aTGTTATCACTGTAGCCGTTGGCTCCTAACTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGATCAAGAATGTGCCCCAAtttact             >  2:432602/1‑138 (MQ=11)
                                                                                                                                 aTGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTtat             <  1:95837/141‑1 (MQ=255)
                                                                                                                                  tGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGGTCAAGAATATGCCCCAATTTtata            >  1:588817/1‑141 (MQ=255)
                                                                                                                                   tttATCAGTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTatat           <  2:251177/140‑1 (MQ=21)
                                                                                                                                   gTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGATCGTGGTGTAAACGTTCATCACTTAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTatat           <  1:618071/141‑1 (MQ=11)
                                                                                                                                    ttATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATCTTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATc          >  1:462396/1‑141 (MQ=25)
                                                                                                                                    ttATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATc          >  2:350294/1‑141 (MQ=255)
                                                                                                                                     tATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCa         <  1:846144/141‑1 (MQ=255)
                                                                                                                                      aTCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCaa        >  1:147593/1‑141 (MQ=255)
                                                                                                                                         ccTGTAGCCGGTGGCTACCATCTAAGATAGGCCTTGCGCCATCGCGATATATCTGAAATATTAAGAGACCGTGGTGTAAACGTTCATCATTCAACGATTGACAGTTGGGTTCAGGAATACGCCCCAATCTTATATCAAAtt     <  2:737842/140‑1 (MQ=11)
                                                                                                                                           tGTAGCCTTTGGCTACTATCTAAGTTATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTg   <  2:208734/141‑1 (MQ=11)
                                                                                                                                           tGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTg   <  2:573250/141‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                             
ACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGG  >  CP000730/76120‑76400

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.