| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description | 
| RA | CP000730 | 76,265 | C→T | 30.7% | intergenic (+323/‑811) | USA300HOU_0072 → / → USA300HOU_0075 | universal stress protein/lysophospholipase | 
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 76,265 | 0 | C | T | 30.7% | 794.4 / inf | 770 | intergenic (+323/‑811) | USA300HOU_0072/USA300HOU_0075 | universal stress protein/lysophospholipase | 
| Reads supporting (aligned to +/- strand): ref base C (299/229); new base T (136/99); total (440/330) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.85e-01 | |||||||||||
Only 100 of 777 total aligned reads displayed.
AAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGA  >  CP000730/76125‑76404                                                                                                                                            |                                                                                                                                            aaGGCAAATAATTTAATAATTATAGCAAAATATAGGTTCCGTTGCAAATTTGAATCTATAGTATAATATTAAAAAACACACGAATAATATATAATATTTTTCTGATATAAACAATTTAACAAGGAGTTTATCACTGTGGcc                                                                                                                                              <  2:388966/141‑1 (MQ=16)    cAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTGTAATGTGAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTg                                                                                                                                          >  2:288168/1‑141 (MQ=255)       tttcaaatttgatatanaagtggggcatattcttgaacccaacggtagatcgttgaatgatgaacgtttacaccacgttctcttaatatttcagatatatcacgatagctcaatgcatatcttagataGTAGCCGTTGGct                                                                                                                                       >  1:851620‑M1/129‑141 (MQ=255)           aaatttgatataaaattggggcatattcttgaacccaacggtagaccgttgaatgatgaacgtttacaccacgttcccttaatatttcagatatatcacgataactcaatgcatatcttagataGTAGCCGTTGGctacta                                                                                                                                   >  1:477121‑M1/125‑141 (MQ=255)                         agtaaatgaGGTTCTGTTGCAAAGTTGAATTTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCAt                                                                                                                     <  1:305690/133‑1 (MQ=11)                           taaatgaGGTTCTGTTGCAAAGTTGAATTTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTg                                                                                                                   <  1:8915/135‑1 (MQ=255)                           gttaggaGGTTCTGTTGCAAAGTTGAATTTATAATATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTg                                                                                                                   <  1:380337/135‑1 (MQ=255)                           gtgaggaGGTTCTGTTGCAAAGTTGAATTTATAATATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTg                                                                                                                   <  1:170288/135‑1 (MQ=255)                             taggaGGTTCTGTTGCAAAGTTGAATTTATAATATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTCGCCGTTGGCTACTATCTAAGATATGCATTGAg                                                                                                                 <  1:674998/137‑1 (MQ=11)                             atatAGGTTCTGTTGCAAAGTTGAATCTATAGTATAAATTTAACCAAAGGGAGGCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAg                                                                                                                 <  1:538118/141‑1 (MQ=255)                               ggaGGTTCTGTTGCAAAGTTGAATTTATAATATAATTTTAACAAAAAGGAGTCTGCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAgct                                                                                                               <  1:26698/139‑3 (MQ=255)                               ataGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGtt                                                                                                               <  1:404232/141‑1 (MQ=38)                                 aGGTTCTGTTGCAAAGTTGTATTTATAATATAATTTTAACAAAATGGTGTCTTCTGTATGCACTATTTCAGATTTAAACAATTTAACAAGGATGTTATGACTGTAGCGGTTGGTTACTATCTAAGTTTTGCATTGAGCTAt                                                                                                             >  1:826037/1‑141 (MQ=1)                                 aGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTAt                                                                                                             >  2:725801/1‑141 (MQ=37)                                 aGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTAt                                                                                                             >  2:625541/1‑141 (MQ=35)                                  ggTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATc                                                                                                            >  1:811265/1‑141 (MQ=35)                                     tCTGTTGCAAAGTTGAATTTATAATATAATTTTAACAAAAAGGATTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTg                                                                                                         <  1:342555/141‑1 (MQ=255)                                           gCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGatatat                                                                                                   >  1:235829/1‑141 (MQ=35)                                                      tttataatataaTTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTATGATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTa                                                                                       <  2:666111/139‑1 (MQ=11)                                                        tataatataaTTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAg                                                                                     <  1:220217/141‑1 (MQ=17)                                                        tataatataaTTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAg                                                                                     <  2:197586/141‑1 (MQ=12)                                                        tataacataATTGTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAg                                                                                     <  1:424568/135‑1 (MQ=255)                                                        tataGTATAATTTTAACAAAGAGGAGTCTTCTGTATGAACTATTACAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGCTATGCGTTGAGTTATCGTGATATATCGTGaaacttaag                                                                                      >  2:515065/1‑135 (MQ=11)                                                           aatataATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATACC‑TGAAATATTAAgaga                                                                                  >  1:739070/3‑141 (MQ=12)                                                              ataATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACg                                                                               <  1:728909/141‑1 (MQ=17)                                                              ataATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACg                                                                               >  1:129721/1‑141 (MQ=17)                                                              ataATTCTAACAAAAAGGAGTCTTCTGTAGGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATAGATC‑TGAAATATTAAGAGAACg                                                                               <  2:816093/141‑1 (MQ=11)                                                                    ttAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGgtgt                                                                         <  1:205139/141‑1 (MQ=12)                                                                    ttAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATCTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGgtgt                                                                         <  2:298015/141‑1 (MQ=12)                                                                     tAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTa                                                                        <  1:881806/141‑1 (MQ=17)                                                                     tAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTa                                                                        >  2:54508/1‑141 (MQ=17)                                                                      aaCAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACgtgtgggaa                                                                       >  2:266792/1‑135 (MQ=255)                                                                       aCAAAAAGGAGTCTTCTGTATGAACGATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATAGTAAGGGAACGTGGTGTaaa                                                                      <  2:710147/141‑1 (MQ=12)                                                                        cAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGGTCTATA‑AAAAATTTAAAGAGAAGGTGGTGTAAAc                                                                     >  2:235302/1‑141 (MQ=11)                                                                        cAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAAc                                                                     >  2:208945/1‑141 (MQ=17)                                                                         aaaaaGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGGGTTATCCTGGTATATC‑TGAAATATTAAGGGAACGTGGTGTAAACg                                                                    <  1:453035/141‑1 (MQ=255)                                                                         aaaaaGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACg                                                                    <  2:692151/141‑1 (MQ=17)                                                                           aaaGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGtt                                                                  >  2:864185/1‑141 (MQ=17)                                                                           aaaGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACGtt                                                                  >  1:148372/1‑141 (MQ=17)                                                                              ggAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACACGGAAGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTtcat                                                               >  1:182657/1‑141 (MQ=12)                                                                                ggTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTtcatca                                                             <  2:60695/140‑1 (MQ=17)                                                                                 gTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACGTTcatcat                                                            >  1:64746/1‑141 (MQ=17)                                                                                    ttctGTATGATCTATTTCAGATATAAACAATTTAACAAGCATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCa                                                         <  1:500011/141‑1 (MQ=255)                                                                                    ttctGTATGAACTATTTCAGATCTAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGCAATATTAAAAGAGCGTGGTGTACACGTTCATCATTCa                                                         >  2:420183/1‑141 (MQ=11)                                                                                    ttctGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGGTATATC‑TGAAATATTAAGAGAAGGTGGTGTAAACGTTCATCATTCa                                                         >  2:848442/1‑141 (MQ=255)                                                                                        gTATGAACTATTTCCGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGACCGTGGTGTAAACGTTCATCATTCAACga                                                     <  2:937379/141‑2 (MQ=255)                                                                                         tATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGt                                                    <  2:831974/141‑1 (MQ=17)                                                                                         tATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGTATTGAGCTAGCGTGATATATC‑TGAAATATTAAAAGAGCGTGGTGTAAACGTTCATCATTCAACgac                                                    >  1:582906/1‑139 (MQ=11)                                                                                          aTGAATTATTTCAGATTTAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTc                                                   <  2:749168/141‑1 (MQ=12)                                                                                           tGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCt                                                  <  2:129721/141‑1 (MQ=17)                                                                                           tGAACTATTTCAGATATAAACAATTGAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCt                                                  >  2:125332/1‑141 (MQ=255)                                                                                             aaCTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTAc                                                <  2:450747/141‑1 (MQ=17)                                                                                              accaTTGCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTAcc                                               <  1:440836/138‑1 (MQ=12)                                                                                              aCTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTAcc                                               >  2:878605/1‑141 (MQ=32)                                                                                               cTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATGTATC‑TGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCg                                              >  1:715367/1‑141 (MQ=11)                                                                                                tATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGt                                             <  1:548955/141‑1 (MQ=17)                                                                                                tATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGt                                             <  1:792983/141‑1 (MQ=255)                                                                                                tATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGt                                             <  1:862502/141‑1 (MQ=255)                                                                                                 aTTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGtt                                            >  2:323545/1‑141 (MQ=17)                                                                                                 aTTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGATGTTGGTTAAAAGCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGtt                                            <  1:923611/141‑1 (MQ=11)                                                                                                      aGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTGAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACAGTTGGGtt                                       >  1:633555/1‑141 (MQ=12)                                                                                                      aGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGtt                                       >  2:633950/1‑141 (MQ=12)                                                                                                       gATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTc                                      <  2:589458/141‑1 (MQ=255)                                                                                                        atatAAACAATTTAACAAGGCTGTTGTTACTTTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCa                                     >  2:910492/1‑141 (MQ=11)                                                                                                        atatAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCa                                     >  2:791133/1‑141 (MQ=12)                                                                                                          ataAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAg                                   <  1:252841/141‑1 (MQ=32)                                                                                                          ataAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTcctg                                   <  2:475812/141‑4 (MQ=255)                                                                                                          ataAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCCATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAg                                   <  1:781498/141‑1 (MQ=255)                                                                                                           taAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCacgc                                  >  2:462074/1‑138 (MQ=17)                                                                                                           taAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCCAACAGATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGNAACGTGGTGTAAACGTTCATCATTCAACGNTCTACCGTTGGGTTCAANa                                  >  1:839373/1‑141 (MQ=11)                                                                                                            aaaCAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCCACGATCTACCGTTGGGTTCAAGaa                                 <  1:687177/141‑1 (MQ=255)                                                                                                            aaaCAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATCGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAACCGTTCGTCATTCAACGCGCTACCGATGGGGGCAAGaa                                 >  2:889047/1‑141 (MQ=11)                                                                                                              aCAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAata                               <  1:101457/141‑1 (MQ=255)                                                                                                              aCAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAata                               >  1:119210/1‑141 (MQ=12)                                                                                                               cAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGCGCTACCGTGCTCTGGC‑GGTTATATTAGGTGAGCGGGGTGTAAACGTTCATCATTCAACGAACTACCGTTGGGTTCAAGAatat                              >  2:102979/1‑141 (MQ=11)                                                                                                               cAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAatat                              >  2:770123/1‑141 (MQ=32)                                                                                                                aaTTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATg                             <  2:436887/141‑1 (MQ=32)                                                                                                                 aTTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGc                            <  1:288223/141‑1 (MQ=17)                                                                                                                 aTTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGc                            <  2:735724/141‑1 (MQ=12)                                                                                                                  tttAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGcc                           <  1:601757/141‑1 (MQ=255)                                                                                                                   ttAACGAGGATGTTATTACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGGGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGccc                          <  2:55767/141‑1 (MQ=11)                                                                                                                    tAACAAGGATGTTATCTCTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCTTTGGGTCCAAGAATATGcccc                         <  2:646822/141‑1 (MQ=255)                                                                                                                     aaCAAGGATGTTATCACTGTCGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAAAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCa                        >  1:609877/1‑141 (MQ=11)                                                                                                                     aaCAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTTGGTTCAAGAATATGCCCCa                        >  1:355111/1‑141 (MQ=17)                                                                                                                     aaCAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGACTATGCCCCa                        >  1:323168/1‑141 (MQ=17)                                                                                                                      aCAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTATACCGTTGGGTTCTAGAATATGCCCaaa                       >  2:366249/1‑141 (MQ=255)                                                                                                                      aCAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGACATATTAAGAGAACGAGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAGTATGCCCCaa                       >  2:406421/1‑141 (MQ=11)                                                                                                                      aCAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCaa                       >  2:171583/1‑141 (MQ=255)                                                                                                                         aGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAGGAATGTGCCGCAAttt                    >  2:490655/1‑141 (MQ=255)                                                                                                                              gTTATCACTGCAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTatat               <  1:461512/141‑1 (MQ=25)                                                                                                                               ttATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATc              >  2:507585/1‑141 (MQ=255)                                                                                                                                tATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAAGATGCCCCAATTTTATATCa             <  1:564762/141‑1 (MQ=11)                                                                                                                                 aTCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATTTGCCCCAATTTTATATCaa            >  2:802734/1‑141 (MQ=255)                                                                                                                                 aTCACTGTAGCCGTTGGCTACTATCTAAGATATGCACTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCaa            <  1:522991/141‑1 (MQ=255)                                                                                                                                  tCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCaaa           >  1:6672/1‑141 (MQ=255)                                                                                                                                     cTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAAttt        >  2:343556/1‑141 (MQ=25)                                                                                                                                      tGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTg       <  2:573250/141‑1 (MQ=255)                                                                                                                                       GTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTgg      >  1:754304‑M1/1‑141 (MQ=255)                                                                                                                                         aaCCGTTGGCTACTATCTAAGATATGCATTGGGCTATCGTAATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACTTTCATCATTTAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGgaa    >  2:140467‑M1/3‑141 (MQ=255)                                                                                                                                          GCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATC‑TGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGgaag   >  1:368111‑M1/1‑141 (MQ=255)                                                                                                                                            |                                                                                                                                            AAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATC‑TGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGA  >  CP000730/76125‑76404 | 
| Alignment Legend | 
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG | 
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑ |