Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 1,673,843 T→C 6.1% K391K (AAA→AAG dnaG ← DNA primase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007301,673,8430TC 6.1% 180.4 / 3.1 66K391K (AAA→AAGdnaGDNA primase
Reads supporting (aligned to +/- strand):  ref base T (30/31);  new base C (2/2);  total (33/33)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.11e-01

TAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCACTTTATAATGTGCAAATGACTTTTTGTCATTTTTTACAAAAGCAGTAAATGCATCGTTGCCATACTTACC  >  CP000730/1673703‑1673971
                                                                                                                                            |                                                                                                                                
taataaTTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCt                                                                                                                                  >  1:862648/1‑141 (MQ=255)
 aattatTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTTACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCtt                                                                                                                                 <  1:6319/141‑1 (MQ=255)
 aagaatTGGCTGGTGCTGGATTGAATTTTATTTCGTTAGCTAATTGCTCAGGACTAACATTGAAAAATGGTGCAACATCAGTTAAAGCCTTTTGTTGCAAAATCGATGATGTCATAAGCGAAATATCATGACTTAGTTCtt                                                                                                                                 <  1:309786/138‑1 (MQ=255)
    aatTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCa                                                                                                                              <  2:855365/141‑1 (MQ=255)
     atTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCaa                                                                                                                             <  1:867305/141‑1 (MQ=255)
       tGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAAt                                                                                                                           >  2:87801/1‑141 (MQ=255)
       tGGCTGGTGCTTGATTGAATTGGATTTCGTTAGCTAATTGCTCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAAt                                                                                                                           <  1:513594/141‑1 (MQ=255)
         gCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATaa                                                                                                                         >  1:352889/1‑141 (MQ=255)
             gTGCTTGATTGAATTGTAGTTCGTTAGATAATTTCTCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGtt                                                                                                                     <  2:109356/141‑1 (MQ=255)
                       gaATTGTATTTCGTTAGCTAATTGCTCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAg                                                                                                           >  2:225614/1‑141 (MQ=255)
                         aTTGTATTTCGTTAGCTAATTGCTCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTTTTTTTTTTTTTTTGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATACAGTTCATTTGaatgtt                                                                                                         >  2:377532/1‑137 (MQ=255)
                         aTTGTATTTCGTTAGCTAATTGCTCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAgga                                                                                                         >  2:215784/1‑140 (MQ=255)
                         aTTGTATTTCGTTAGCTAATTGCTCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGt                                                                                                         >  1:95193/1‑141 (MQ=255)
                          ttGTATTTCGTTAGATAATAGCTCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATAACTTGTTTCTTCCAAATAACGTTCATATGAAAgagc                                                                                                        >  1:518215/1‑138 (MQ=255)
                            ttATTTCGTTAGCTAATTGCTCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCAt                                                                                                      <  2:329023/140‑1 (MQ=255)
                            ggagttCGGTAGCTAATTGCTCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCAt                                                                                                      <  1:366920/137‑1 (MQ=255)
                            gTATTTCGTTAGCTAATTGCTCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCAt                                                                                                      <  1:3614/141‑1 (MQ=255)
                            gTATTTCGTTAGCTAATTGCTCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCAGATGAAAGGTCAt                                                                                                      >  2:830223/1‑141 (MQ=255)
                                ttCGTTGGCTAATTGCTCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTAtg                                                                                                  <  2:396238/141‑1 (MQ=255)
                                   tttAGATAACTGCTCAGGACTAAAATTAAAAAAGGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGc                                                                                               <  2:33096/140‑1 (MQ=255)
                                   gTTAGCTAATTGCTGAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTTGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGc                                                                                               <  1:673485/141‑1 (MQ=255)
                                   gTTAGCTAATTGCTCAGGCCTAACATTGTAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGc                                                                                               <  1:446011/141‑1 (MQ=255)
                                   gTTAGCTAATTGCTCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGc                                                                                               <  1:865526/141‑1 (MQ=255)
                                   gTTAGCTAATTGCTCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGc                                                                                               <  1:765520/141‑1 (MQ=255)
                                      aGCTAATTGCTCAGGAAAAAAAAAAAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAAt                                                                                            <  2:498905/141‑1 (MQ=255)
                                      aGCTAATTGCTCAAGACTAACAATGAAAAATGGTGCAACATCATTTAAAGCTTTTTGTGGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAGATAACGTTCATATGAAAGGTCATTATGTGCAAt                                                                                            <  2:622694/141‑1 (MQ=255)
                                        cTAATTGCTCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCCTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAAttt                                                                                          >  2:494243/1‑141 (MQ=255)
                                        cTAATTGCTCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCCTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAAttt                                                                                          >  2:864471/1‑141 (MQ=255)
                                        cTAATTGCTCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCAAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAAttt                                                                                          >  2:427164/1‑141 (MQ=255)
                                          aaTTGCTCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCa                                                                                        <  2:244161/141‑1 (MQ=255)
                                               cTCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCttt                                                                                   <  2:352889/141‑1 (MQ=255)
                                                tCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTCGTTCGTGCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCtttt                                                                                  >  1:776379/1‑141 (MQ=255)
                                                 cAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTa                                                                                 <  2:435835/141‑1 (MQ=255)
                                                 cAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTa                                                                                 >  2:763741/1‑141 (MQ=255)
                                                 cAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTa                                                                                 >  2:412962/1‑141 (MQ=255)
                                                 cAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCAGGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGCCATTATGTGCAATTTCATCTTTTa                                                                                 >  2:335023/1‑141 (MQ=255)
                                                  aGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTaa                                                                                <  2:420512/141‑1 (MQ=255)
                                                  aGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTaa                                                                                <  1:284910/141‑1 (MQ=255)
                                                    gACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAACTCGAGTATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAata                                                                              <  1:358942/141‑1 (MQ=255)
                                                          cATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCa                                                                        >  2:268348/1‑141 (MQ=255)
                                                          cATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCa                                                                        >  2:737351/1‑141 (MQ=255)
                                                                    tGGTGCAACATCATTTAAAGCCTTTTGTTGCAATATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATTACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCACTTTATAAtg                                                              <  2:289628/141‑1 (MQ=255)
                                                                    tGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAACGACATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTTACTTTATAAtg                                                              >  1:793438/1‑141 (MQ=255)
                                                                        tcAACATCATTTAAAGCCTTTTGTCGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCACTTTATAATGTGCa                                                          <  1:617076/140‑1 (MQ=255)
                                                                         cAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCACTTTATAATGTGCaa                                                         <  2:352188/141‑1 (MQ=255)
                                                                           aCATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCACTTTATAATGTGCAAAt                                                       >  2:440205/1‑141 (MQ=255)
                                                                                atTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCACTTTATAATGTGCAAATGACtt                                                  <  2:381347/141‑1 (MQ=255)
                                                                                     aaGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCACTTTATAATGTGCAAATGACTTTTTGt                                             >  1:263447/1‑141 (MQ=255)
                                                                                      aGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGGAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATAAAAACATTATAATGTGCACCTGCCTTTTTGTc                                            <  2:624434/141‑1 (MQ=255)
                                                                                          ttttGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCCTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCACTTTATAATGTGCAAATGACTTTTTGTCAttt                                        <  1:864471/141‑1 (MQ=255)
                                                                                          ttttGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCCTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCACTTTATAATGTGCAAATGACTTTTTGTCAttt                                        <  1:494243/141‑1 (MQ=255)
                                                                                           tttGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCACTTTATAATGTGCAAATGACTTTTTGTCAtttt                                       >  2:682654/1‑141 (MQ=255)
                                                                                           tttGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCACTTTATAATGTGCAAATGACTTTTTGTCAtttt                                       >  2:682627/1‑141 (MQ=255)
                                                                                             tgttgCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCACTTTCTAATGCGCAAATGACTTTTTGTCAtttttt                                     <  1:225614/141‑1 (MQ=255)
                                                                                             tgttgCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCACTTTATAATGTGCAAATGACTTTTTGTCAtttttt                                     <  2:830004/141‑1 (MQ=255)
                                                                                              gttgCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCACTTTATAATGTGCAAATGACTTTTTGTCATTTTTTa                                    >  1:585710/1‑141 (MQ=255)
                                                                                              gttgCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCACTTTATAATGTGCAAATGACTTTTTGTCATTTTTTa                                    >  1:90949/1‑141 (MQ=255)
                                                                                                  cAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCACTTTATAATGTGCAAAGTACTTTTTGTAATTTTTTACaaa                                >  1:422441/1‑141 (MQ=255)
                                                                                                       tCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCACTTTATAATGTGCAAATGACTTTTTGTCATTTTTTACAAAAGCAg                           >  1:519519/1‑141 (MQ=255)
                                                                                                       tCGATGATTTCATAAGCGAAAGATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCCACTTATAATGTGCATATGCCTGTTTGGCATGTTTTACtaatacgg                           >  2:647891/1‑136 (MQ=255)
                                                                                                         gatgatTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCACTTTATAATGTGCAAATGACTTTTTGTCATTTTTTACAAAAGCAGTa                         >  2:84022/1‑141 (MQ=255)
                                                                                                           tgatTTCAGAAGCGAAATATCATGTCTGAGTTGTTTCAAATAACGTTCATATGTAAGGTCATTATGTGCAATTTCATCTTTTACTATACTCACTTTATAATGTGCAAATGACTTTTTGTCATTTTTTACAAAAGCAGTaaa                       <  2:170071/141‑1 (MQ=255)
                                                                                                              tttCATAAGCGAAATCTCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCACTTTATAATGTGCAAATGACTTTTTGTCATTTTTTACAAAAGCAGTAAATGc                    >  1:700865/1‑141 (MQ=255)
                                                                                                              tttCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCACTTTATAATGTGCAAATGACTTTTTGTCATTTTTTACAAAAGCAGTAAATGc                    <  1:66316/141‑1 (MQ=255)
                                                                                                                          aaTATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCACTTTATAATGTGCAAATGACTTTTTGTCATTTTTTACAAAAGCAGTAAATGCATCGTTGCCATa        <  1:427164/141‑1 (MQ=255)
                                                                                                                          aaTATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCACTTTATAATGTGCAAATGACTTTTTGTCATTTTTTACAAAACCAGTAAATGCATCGTTGCCATa        >  2:543924/1‑141 (MQ=255)
                                                                                                                           atatCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGCGCATCTCCATCTTTTAATATACTCACTTTATAATGTGCAAATGACTTTTTGTCATTTTTTACAGAGGCAGTAAATGCATCTTTATCATAc       >  1:410285/1‑141 (MQ=255)
                                                                                                                               cATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCACTTTATAATGTGCAAATGACTTTTTGTCATTTTTTACAAAAGCAGTAAATGCATCGTTGCAATAATTAc   >  2:306845/1‑141 (MQ=255)
                                                                                                                                aTGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCACTTTATAATGTGCAAATGACTTTTTGTCATTTTTTACAAAAGCAGTAAATGCATCGTTGCCATACTTAcc  >  2:757649/1‑141 (MQ=255)
                                                                                                                                            |                                                                                                                                
TAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTAACATTGAAAAATGGTGCAACATCATTTAAAGCCTTTTGTTGCAAAATCGATGATTTCATAAGCGAAATATCATGACTTAGTTCTTTCAAATAACGTTCATATGAAAGGTCATTATGTGCAATTTCATCTTTTAATATACTCACTTTATAATGTGCAAATGACTTTTTGTCATTTTTTACAAAAGCAGTAAATGCATCGTTGCCATACTTACC  >  CP000730/1673703‑1673971

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: