| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 2,540,782 | G→A | 7.4% | E118K (GAA→AAA) | USA300HOU_2401 → | immunoglobulin G‑binding protein SBI |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 2,540,782 | 0 | G | A | 7.4% | 318.5 / 2.7 | 116 | E118K (GAA→AAA) | USA300HOU_2401 | immunoglobulin G‑binding protein SBI |
| Reads supporting (aligned to +/- strand): ref base G (52/52); new base A (2/8); total (55/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.87e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 116 total aligned reads displayed.
TACATCAAAACATTACGCGAACACCCAGAACGTGCACAAGAAGTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGAACGTCAAAATATTGAAAATGCGGATAAAGCAATTAAAGA > CP000730/2540644‑2540918 | aTCAAAACATTACGCGAACACCCAGAACGTGCACAAGAAGTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACaa < 1:78923/141‑1 (MQ=255) aTCAAAACATTACGCGAACACCCAGAACGTGCACAAGAAGTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACaa < 2:11915/141‑1 (MQ=255) tCAAAACATTACGCGAACCCCCAGAACGCGCACAAGAAGTATTCTCCGAATCACTTAAAGACAGCAAGAACCCAAACCGACGTGTTGCACAACAAAACCCAATAAAAAAAGACCTTAAAAAAGATAACATAACCAAACaaa > 2:911917/1‑140 (MQ=255) ctaaaactgaCGCGAACACCCAGAACGTGCACAAGAAGTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACGTCCGTGTTGCTCAACAAAACGCTTTTTACAATGTTCGTAAAGTTGGTTACTTAACTTAACAAGa < 2:61321/132‑1 (MQ=255) aaCATTACGCGAACACCCAGAACGTGCACAAGAAGTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGaaaa < 1:401729/141‑1 (MQ=255) aaCATTACCCGAACACCCAGAACGTGCACAAGAAGTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGaaaa < 1:360712/141‑1 (MQ=255) aaCATGACGCGAACACCCAGACCCCACACAAGAGGTATTCGCTGAATCACTTAAAGACACCAAGAACCCAGGCCGACGTGTTGCACAACAAACCGCTTTTTACAATGTTCTTAAAAATGATAAATTAACTGAACAAGaaaa < 2:194484/141‑1 (MQ=255) cATTACGCGAACACCCAGAACGTGCACAAGAAGTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGaaaaaa < 2:608351/141‑1 (MQ=255) cATTACGCGAACACCCAGAACGTGCACAAGAAGTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGaaaaaa > 1:50815/1‑141 (MQ=255) agtACGCGAACACCCAGACCGTGCACAAGAAGTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGaaaaaaa < 1:517771/139‑1 (MQ=255) aTTACGCGAACACCCAGAACGTGCACAAGAAGTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGaaaaaaa < 1:360877/141‑1 (MQ=255) tACGCGAACACCCAGAACGTGCACAAGAAGTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAaata > 1:597906/1‑141 (MQ=255) cgcgAACCTCCAGAACGTGCACAAGAAGTATTCTCTGAATCACTTAAAGACAGCAACACCCCAGACCTACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAaataat < 1:938273/141‑1 (MQ=255) cgAACACCCAGAACGTGCACAAGAAGTATTCTCTGAAGCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTa < 1:583890/141‑1 (MQ=255) acacCCAGAACGTGCACAAGAAGTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACAt < 1:120463/141‑1 (MQ=255) acacCCAGAACGTGCACAAGAAGTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACAt > 2:298503/1‑141 (MQ=255) acacCCAGAACGTGCACAAGAAGTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACAt < 1:756270/141‑1 (MQ=255) acCCAGAACGTGCACAAGAAGTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACACTGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTg > 1:424281/1‑141 (MQ=255) cccAGAACGTGCACAAGAAGTATTCTCTGAATCACTTAAAGACAGCAACAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAAAAAAAAATAATTACaatac > 2:721822/1‑137 (MQ=255) cccAGAACGTGCACAAGAAGTAATCTCTGAAGCACTAAAAGACAGCCAAAACCAAGCCCAACATGATAAACAAAAAAACGCTAACAACAATGCAAAAAAAAACGATAAATTAACTGAACAAGAAAAAACTAATAACaataa > 2:261321/1‑137 (MQ=255) ccAGAACGTGCACAAGAAGTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGca < 1:745060/141‑1 (MQ=255) ccAGAACGTGCACAAGAAGTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACGGAACAAGAAAAAAATAATTACATTGca > 1:163878/1‑141 (MQ=255) aGAACGTGCACAAGAAGTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTAAAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGcaca < 2:192115/141‑1 (MQ=255) aaCGTGCACAAGAAGTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACaaa > 2:269422/1‑141 (MQ=255) acctGCACAAGAAGTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAAt < 1:16981/138‑1 (MQ=255) aCGTGCACAAGAAGTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAAt < 1:206320/141‑1 (MQ=255) gCACAAGAAGTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTaaa > 1:332450/1‑141 (MQ=255) cacagaagTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGa < 1:344314/138‑1 (MQ=255) acaAGAAGTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGa < 2:699194/141‑1 (MQ=255) acaAGAAGTATTCTCTAAATCAATTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTATTTACAATGTTCTTAAACCTGATAACTTAACAAAAAAAAAAAAAAATAATTACATTGCACAAATTAAAGa < 2:319706/141‑1 (MQ=255) aattATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGAGCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACCGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAAcc < 2:388043/138‑1 (MQ=255) aagAATTCTATAAAACACTTAAAGACAGAAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTATTTACAATGTTCTTAAAAATGATAACTTAAAAAAAAAAAAAAAAAATAATTACATTGCACAAATTAAAGAAAAcc < 2:131032/141‑1 (MQ=255) agTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAAccc > 1:651102/1‑141 (MQ=255) agTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAAccc > 2:560967/1‑141 (MQ=255) gTATTCTCGGAATCACTTAAAGACCGCAAGCACCCAGCCCGACGTGTTGCATAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAACATAATTACATTGCACAAATTAAAGAAAACCCt < 2:504504/141‑1 (MQ=255) aTTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCCGa > 1:277109/1‑141 (MQ=255) tctGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGa > 1:669913/1‑141 (MQ=255) ctGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTATTACCATGTTCTTAAAAATGATACCTTAACTGAACAACAAAAAAATAATTACATTGCACAAATTAAAGAAAAACCTAATaaaa > 2:133916/1‑141 (MQ=255) aagcatggaaaGACAGCAAGAACCCAGAGCGACGTGGTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATGACATTGGACAAATTAAAGAAAACCCTGATAGAAGcc < 2:129914/133‑1 (MQ=255) gcACTTAAAGGCAGCGAGAACCGAGACCCACGTGTTGCACCACAAAACGCAATTTAGAATGTTCTTAAACATGATAACTTAAAAAAAAAAAAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCcaa < 2:559326/140‑1 (MQ=255) agaCTTAAAGACAGCAAGAACCCCGACACACGTGTTGCACCACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTCAACTGAACAAGAAAAAAATAATTACCATGCCGTTTATAAAGAATACCCTGATAGAAGCcaa < 1:456006/139‑1 (MQ=255) acaatgaaaGACAACAAGAACCCAGACCGACGTCAGGCACAAAAAACCGCTTTTTACAATATTCTTAAAAATGATAACAAAACAAAAAAAAAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCcaa < 2:383720/135‑1 (MQ=255) cacaaaaaGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTATAATGTTCTTAAAAATGATAACTTAACAAAAAAAAAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCcaac < 2:892133/136‑1 (MQ=255) cTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAAAAAACCCTGATAGAAGCcaacaa > 1:74414/1‑141 (MQ=255) aataaaGCAAGAAGCCAGCCCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGttt < 2:563048/136‑1 (MQ=255) aaGACAGGAAGAACCCAGACCGACGTGTTGCACAACAAGACGCTTTTTACAATGGTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGttt < 2:41374/141‑1 (MQ=255) aaGACAGCAAGAACCCAGACCGACGTGTTGCACAACACAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGttt < 1:848709/141‑1 (MQ=255) aaGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGttt < 1:794447/141‑1 (MQ=255) agccAGCAAGAACCCAGACCGACGTGCTGCACAACAAAACGCTTTTTACAATGTTCTTACAAATGATAACTTAACTTAACAAGACAAAAATAATTACATTGCACAACTTAAAGAAAACCCTGCTAGAAGCCAACAAGTTTg > 2:916952/4‑141 (MQ=255) aGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAATTTg > 2:713487/1‑141 (MQ=255) aCAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGCTATACAATCGTATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTggg < 1:448015/141‑1 (MQ=255) aGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAACTTGGGTa > 1:531170/1‑141 (MQ=255) gCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAg > 1:325571/1‑141 (MQ=255) gCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAg > 2:318051/1‑141 (MQ=255) aaGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACGAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGaa > 1:812784/1‑141 (MQ=255) agcccAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCa > 2:650706/3‑141 (MQ=255) aaCCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCa > 2:683252/1‑141 (MQ=255) aCCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTATAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAg < 1:647430/141‑1 (MQ=255) tgcaaactgACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGt < 2:231805/133‑1 (MQ=255) cccAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGt < 2:47403/141‑1 (MQ=255) aGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACa > 1:730029/1‑141 (MQ=255) aGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACa > 1:480392/1‑141 (MQ=255) ccGACGTGTTGCACAACAAGACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAAtc > 1:518791/1‑141 (MQ=255) ccGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGTATTATGTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAAtc > 1:731359/1‑141 (MQ=255) ccGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCGGTACAAtc > 1:270146/1‑141 (MQ=255) ccGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAAtc > 1:877473/1‑141 (MQ=255) caaCGTGGTGCACAACAAAAACAATTCTACAATGTTCATAAAAATGACAACTTAAAAAAAAAAAAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAAtct < 2:824904/139‑1 (MQ=255) acctgtgGCACAACAAAACGCTTTTTACAATGTGCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAAtcttc < 1:659348/138‑1 (MQ=255) cGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAAtcttct > 2:864585/1‑141 (MQ=255) gCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGAGAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTctaaagct > 1:776305/1‑141 (MQ=255) gCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGAGAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTctaaagct > 1:776394/1‑141 (MQ=255) acaacaAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTctaaagctaa > 2:831709/1‑141 (MQ=255) acaaAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGa > 1:422507/1‑141 (MQ=255) acaaAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGa > 1:773373/1‑141 (MQ=255) aaaCGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGAACg < 1:542369/141‑1 (MQ=255) aaCGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGAACGt < 2:146608/141‑1 (MQ=255) aaCGCTTTTAACAATGTTCTTACAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGAACGt < 2:753019/141‑1 (MQ=255) aCGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGAACGTc > 2:20362/1‑141 (MQ=255) ttACAATGTTCTTAAACATGCTAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGAACGTCAAAatat > 1:936887/1‑141 (MQ=255) aCAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGAACGTCAAAATATTg < 1:318051/141‑1 (MQ=255) aCAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGAACGTCAAAATATTg < 2:332450/141‑1 (MQ=255) aCAATGTTCTTAAAAATGATAACTCAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGAACGTCAAAATATTg < 1:250398/141‑1 (MQ=255) tGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGAACGTCAAAATATTGaaaa > 1:920669/1‑141 (MQ=255) tCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGTTAGAATCAGTACAATCTTCTAAAGCTAAAGAACGTCAAAATATTGAAAATGc < 1:410662/141‑1 (MQ=255) tCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGAACGTCATAATATTGAAAATGc < 1:503206/141‑1 (MQ=255) aaaTGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTTGGTAGAATCAGTACAATCTTCTAAAGCTAAAGAACGTCAAAATATTGAAAATGCGGATaa > 1:247801/1‑141 (MQ=255) aaTTATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGAACGTCAAAATATTGAAAATGCGGATaaa < 1:874872/141‑1 (MQ=255) aaTGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGAACGTCAAAATATTGAAAATGCGGATaaa < 1:298503/141‑1 (MQ=255) aaTGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGAACGTCAAAATATTGAAAATGCGGATaaa > 2:175819/1‑141 (MQ=255) aaTGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGAACGTCAAAATATTGAAAATGCGGATaaa < 2:459081/141‑1 (MQ=255) aaTGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTGGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGAACGTCAAAGTATTGAAAATGCGGATaaa > 1:271600/1‑141 (MQ=255) aaTGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACACTGATAAAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAGGAACGTCAAAATATTGAAAATACGGATaaa > 1:501292/1‑141 (MQ=255) aaTGATAACTTAACTGAACAAGAAAAAAATAATTAAATTGCAAAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGAAAGTCAAAATATTGAAAATGCGGATaaa > 2:172611/1‑141 (MQ=255) aaTGATAACTTAACTGAAAAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCATGATAGAAGCCAACAAGTTTGGTTGGAGTAAGTACAATCTTCAAAAGCTAAAGAACGTCAAAATATTGAAAATCCGCATaaa > 2:375270/1‑141 (MQ=255) gATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGAACGTCAAAATATTGAAAATGCGGATAAAGCa > 2:465590/1‑141 (MQ=255) aaacttaactGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGAACGTCAAAATATTGAAAATGCGGATAAAGCAAt < 1:398202/140‑1 (MQ=255) aacttaactGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGAACGTCAAAATATTGAAAATGCGGATAAAGCAAtt < 1:144787/141‑1 (MQ=255) acttaactGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGAACGTCAAAATATTGAAAATGCGGAACAAGCAATTa > 2:205992/1‑141 (MQ=255) acttaactGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGAACGTCAAAATATTGAAAATGCGGAAAAAGCAATTa > 2:274436/1‑141 (MQ=255) acctaactGAACAAGAAAAAAATAATTACCTTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGAACGTCAAAATATTGAAAATGCGGATAAAGCAATTa < 1:754958/138‑1 (MQ=255) | TACATCAAAACATTACGCGAACACCCAGAACGTGCACAAGAAGTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTTTTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATAGAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGAACGTCAAAATATTGAAAATGCGGATAAAGCAATTAAAGA > CP000730/2540644‑2540918 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |