| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 614104 = | 138 (2.520) | 9 (0.180) | 5/244 | 2.8 | 8.0% | coding (2416/2844 nt) | sdrC | Ser‑Asp rich fibrinogen/bone sialoprotein‑binding protein SdrC |
| ? | CP000730 | = 618849 | 80 (1.610) | coding (3951/4146 nt) | sdrD | Ser‑Asp rich fibrinogen/bone sialoprotein‑binding protein SdrD | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GAGTCTGAGTCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAGTCGCTATCTGAATCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTGAGTCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/614255‑614104‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atctgagtctgaGTCGCTGTCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAATCACTATCCGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTATCCGAAT < CP000730/618849‑618710 GAGTCTGAGTCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAGTCGCTATCTGAATCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTA > 1:116140/1‑141 aTCTGAATCGCTATCTGAATCTGAGTCGTTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATC < 1:618893/140‑1 TCTGAGTCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAGTCGCTATCTGAATCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCGGAATCGCTATCTGAGTCTGAGTCGCTGTCT > 2:315692/1‑141 TCTGAGTCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAGTCGCTATCTGAATCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCT > 2:246923/1‑141 TCTGAGTCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAGTCGCTATCTGAATCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCT < 2:170187/141‑1 CTGAGTCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAGTCGCTATCTGAATCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTG < 2:589267/141‑1 TGAGTCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAGTCGCTATCTGAATCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTGA > 1:433068/1‑141 gtcttgccatccgcGTCTGAGTCGCTATCTCTGTCTGAGTCGCCATCTGAATGTGAGTCGGCGTCTGAATCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTGAG < 2:27250/127‑1 GAGTCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAGTCGCTATCTGAATCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTGAG < 2:600918/141‑1 AGTCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAGTCGCTATCTGAATCTGAGTCGCTGTCTGAATCTGACTCACGATCTGAGTCTGCGTCTCAGTCTGAGTCGGAGTCGCAGTCTGAGTCTGAGTCGCTAACTCAGT > 2:257296/1‑141 GTCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAGTCGCTATCTGAATCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCGATCTGAGTC < 1:567618/141‑1 CTATCTGAGTCTGAGTCGCTATCTGAATCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAg > 2:303099/1‑140 TCGCTATCTGAATCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCagaatct > 1:601504/1‑134 TCGCTATCTGAATCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCagaatct > 1:601531/1‑134 GAATCACTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTGATTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATC > 2:182777/1‑119 GAATCACTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTGATTCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAATCCGAATCGCTATC < 1:182777/119‑1 CGCTGTCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGC < 2:70363/57‑1 CGCTGTCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGC > 1:70363/1‑57 ctgTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAATCACTATCCGAGTCTGAGTCGCTGTCTGAATCTG < 2:619938/138‑1 CGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAA > 2:135225/1‑35 CTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCTTAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAATCACTATCCGAGTCTGAGTCGCTGTCTGAATCTGAGTCGC < 1:542541/141‑1 GAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAATCACTATCCGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTA < 1:572889/141‑1 AGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAATCACTATCCGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTAT > 1:455378/1‑141 AGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAATCACTATCCGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTAT > 1:563248/1‑141 GTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAATCACTATCCGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTATC < 1:115598/141‑1 CTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAATCACTATCCGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTATCCG < 2:301064/141‑1 GAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAATCACTATCCGAGTGTGAGTCGCTATCTGAATCTGAGTCGCTATCCGAg > 2:277523/1‑140 GAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAATCACTATCCGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTATCCGAA < 2:510028/141‑1 AGTCGCTGTCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAATCACTATCCGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTATCCGAAT > 1:497597/1‑141 AGTCGCTGTCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAATCACTATCCGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTATCCGAAT > 1:344729/1‑141 GAGTCTGAGTCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAGTCGCTATCTGAATCTGAGTCGCTGTCTGAATCTGAATCACTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTGAGTCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/614255‑614104‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atctgagtctgaGTCGCTGTCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAATCACTATCCGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTATCCGAAT < CP000730/618849‑618710 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |