| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | = 2699153 | 40 (0.730) | 3 (0.060) | 3/254 | 3.4 | 10.2% | intergenic (+57/‑234) | copA/merP | P‑ATPase superfamily P‑type ATPase copper (Cu2+) transporter/MerTP family mercury (Hg2+) permease, binding protein MerP |
| ? | CP000730 | = 2699196 | 15 (0.290) | intergenic (+100/‑191) | copA/merP | P‑ATPase superfamily P‑type ATPase copper (Cu2+) transporter/MerTP family mercury (Hg2+) permease, binding protein MerP | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CTGCAATGGCACTAAGTTCAGTAAGTGTTGTCACAAACGCACTTAGATTGAAAAAGATGCGATTAGAACCACGCCGTAAAGATGCCTAGATTCCTTAATAATGAAGGATTCGTTGGTGATTCTGAGATAGGCTAGTGATTGGCTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/2699008‑2699153‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggctctTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGCGACATTATAGAGCCAATCACTAGCCTATCTCAGAATCACCAACGAATCCTTCATTATTAAGGAATCTAGGCATCTTTACGGCGTGGTTCTAATCGCATC < CP000730/2699196‑2699063 CTGCAATGGCACTAAGTTCAGTAAGTGTTGTCACAAACGCACTTAGATTGAAAAAGATGCGATTAGAACCACGCCGTAAAGATGCCTAGATTCCTTAATAATGAAGGATTCGTTGGTGATTCTGAGATAGGCTAGTGATTG > 1:119384/1‑141 CAATGGCACTAAGTTCAGTAAGTGTTGTCACAAACGCACTTAGATTGAAAAAGATGCGATTAGAACCACGCCGTAAAGATGCCTAGATTCCTTAATAATGAAGGATTCGTTNGTGATTCTGAGANAGGCTAGTGATTGGCT < 1:593866/141‑1 AATGGCACTAAGTTCAGTAAGTGTTGTCACAAACGCACTTAGATTGAAAAAGATGCGATTAGAACCACGCCGTAAAGATGCCTAGATTCCTTAATAATGAAGGATTCGTTGGTGATTCTGAGATAGGCTAGTGATTGGCTC < 1:500901/141‑1 ATGGCACTAAGTTCAGTAAGTGTTGTCACAAACGCACTTAGATTGAAAAAGATGCGATTAGAACCACGCCGTAAAGATGCCTAGATTCCTTAATAATGAAGGATTCGTTGGTGATTCTGAGATAGGCTAGTGATTGGCTCT < 2:218312/141‑1 AGTTCAGTAAGTGTTGTCACAAACGCACTTAGATTGAAAAAGATGCGATTAGAACCACGCCGTAAAGATGCCTAGATTCCTTAATAATGAAGGATTCGTTGGTGATTCTGAGATAGGCTAGTGATTGGC > 1:285344/1‑129 AGTTCAGTAAGTGTTGTCACAAACGCACTTAGATTGAAAAAGATGCGATTAGAACCACGCCGTAAAGATGCCTAGATTCCTTAATAATGAAGGATTCGTTGGTGATTCTGAGATAGGCTAGTGATTGGC < 2:285344/129‑1 AAAAGATGCGATTAGAACCACGCCGTAAAGATGCCTAGATTCCTTAATAATGAAGGATTCGTTGGTGATTCTGAGATAGGCTAGTGATTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGCGACATTATAGA < 1:37415/141‑1 CACGCCGTAAAGATGCCTAGATTCCTTAATAATGAAGGATTCGTTGGTGATTCTGAGATAGGCTAGTGATTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGCGACATTATA > 1:587546/1‑121 CACGCCGTAAAGATGCCTAGATTCCTTAATAATGAAGGATTCGTTGGTGATTCTGAGATAGGCTAGTGATTGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGCGACATTATA < 2:587546/121‑1 TGGCTCTTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGCGACATTATAGAGCCAATCACTAGCCTATCTCAGAATCACCAACGAATCCTTCATTATTAAGGAATCTAGGCATCTTTACGGCGTGGTTCTAATCGCATC < 1:168305/141‑1 CTGCAATGGCACTAAGTTCAGTAAGTGTTGTCACAAACGCACTTAGATTGAAAAAGATGCGATTAGAACCACGCCGTAAAGATGCCTAGATTCCTTAATAATGAAGGATTCGTTGGTGATTCTGAGATAGGCTAGTGATTGGCTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/2699008‑2699153‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggctctTATGCAGTTGGAGCGAAGATCCAACTGTAAACCGCGACATTATAGAGCCAATCACTAGCCTATCTCAGAATCACCAACGAATCCTTCATTATTAAGGAATCTAGGCATCTTTACGGCGTGGTTCTAATCGCATC < CP000730/2699196‑2699063 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |