Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000730	1339744	1339859	116	5 [4]	[3] 5	USA300HOU_1242/USA300HOU_1243	hypothetical protein/hypothetical protein

ACTTTAGAAACAGCGGAAAAACTCTATAATTACCAAAAACAATTAGAAATAATGATTGAAGATTAAAATAAGGCCATATTTTTGAAATATCATGGAGTGAGCCTTTTAAGTCATCTAATTTTAAAGTATATTAAATATGGATAACTTAATGTGAATATAAATAAAAAATTATCAAATAATATAATATAGAATAGA  >  CP000730/1339603‑1339797                                                                                                                                             |                                                       aCTTTAGAAACAGCGGAAAAACTCTATAATTACCAAAAACAATTAGAAATAATGATTGAAGATTAAAATAAGGCCATATTTTTGAAATATCATGGAGTGAGCCTTTTAAGTCATCTAATTTTAAAGTATATTAAATATGGa                                                        >  1:116176/1‑141 (MQ=255)       gAAACAGCGGAAAAACTCTATAATTACCAAAAACAATTAGAAATAATGATTGAAGATTAAAATAAGGCCATATTTTTGAAATATCATGGAGTGAGCCTTTTAAGTCATCTAATTTTAAAGTATATTAAATATGGATAACtt                                                  <  1:330754/141‑1 (MQ=255)             gCGGAAAAACTCTATAATTACCAAAAACAATTAGAAATAATGATTGAAGATTAAAATAAGGCCATATTTTTGAAATATCATGGAGTGAGCCTTTTAAGTCATCTAATTTTAAAGTATATTAAATATGGATAACTTAAtgtg                                            <  2:123200/141‑1 (MQ=255)                                                aataatGATTGAAGATTAAAATAAGGCCATATTTTTGAAATATCATGGAGTGAGCCTTTTAAGTCATCTAATTTTAAAGTATATTAAATATGGATAACTTAATGTGAATATAAATAAAAAATTATCAAATAatataatata         <  2:116176/141‑1 (MQ=255)                                                       aTTGAAGATTAAAATAAGGCCATATTTTTGAAATATCATGGAGTGAGCCTTTTAAGTCATCTAATTTTAAAGTATATTAAATATGGATAACTTAATGTGAATATAAATAAAAAATTATCAAATAATATAATatagaataga  <  2:350927/141‑1 (MQ=255)                                                                                                                                             |                                                       ACTTTAGAAACAGCGGAAAAACTCTATAATTACCAAAAACAATTAGAAATAATGATTGAAGATTAAAATAAGGCCATATTTTTGAAATATCATGGAGTGAGCCTTTTAAGTCATCTAATTTTAAAGTATATTAAATATGGATAACTTAATGTGAATATAAATAAAAAATTATCAAATAATATAATATAGAATAGA  >  CP000730/1339603‑1339797

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑