Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000730	1958651	1958724	74	2 [0]	[1] 2	lukE/USA300HOU_1819	leukotoxin LukE/hypothetical protein

AATTTATACTATGATATTCAATTATAATGCCTAGTCTCATAGTAAACGGCTACTACATTCGCATGTACTTCGTTTTACTGTCCACGCATGGTCGTTGACTTATTTATAT  >  CP000730/1958542‑1958650                                                                                                             | aaTTTATACTATGATATTCAATTATAATGCCTAGTCTCATAGTAAACGGCTACTACATTCGCATGTACTTCGTTTTACTGTCCACGCATGGTCGTTGACTTATttatat  <  1:47542/109‑1 (MQ=255) aaTTTATACTATGATATTCAATTATAATGCCTAGTCTCATAGTAAACGGCTACTACATTCGCATGTACTTCGTTTTACTGTCCACGCATGGTCGTTGACTTATttatat  >  2:47542/1‑109 (MQ=255)                                                                                                             | AATTTATACTATGATATTCAATTATAATGCCTAGTCTCATAGTAAACGGCTACTACATTCGCATGTACTTCGTTTTACTGTCCACGCATGGTCGTTGACTTATTTATAT  >  CP000730/1958542‑1958650

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑