Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000730	2086136	2086138	3	2 [0]	[0] 2	USA300HOU_1945/USA300HOU_1946	hypothetical protein/hypothetical protein

TAATCGGAATTTTTGTTGCAATATACGGTATGAAGCGAGCAACATATTGGTTAAACTTATTGATTTTATTTACCAATATTTTTTATTTTCTACACTTCTGT  >  CP000730/2086035‑2086135                                                                                                     | tAATCGGAATTTTTGTTGCAATATACGGTATGAAGCGAGCAACATATTGGTTAAACTTATTGATTTTATTTACCAATATTTTTTATTTTCTACACTTCtgt  >  1:212583/1‑101 (MQ=255) tAATCGGAATTTTTGTTGCAATATACGGTATGAAGCGAGCAACATATTGGTTAAACTTATTGATTTTATTTACCAATATTTTTTATTTTCTACACTTCtgt  <  2:212583/101‑1 (MQ=255)                                                                                                     | TAATCGGAATTTTTGTTGCAATATACGGTATGAAGCGAGCAACATATTGGTTAAACTTATTGATTTTATTTACCAATATTTTTTATTTTCTACACTTCTGT  >  CP000730/2086035‑2086135

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑