Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000730	2087278	2087518	241	2 [1]	[1] 2	USA300HOU_1946/chp	hypothetical protein/chemotaxis inhibitory protein CHIPS

CTTGAAAACGCCCAAGGTAATATTAACATAAAATGGCTACTATTGCATTATCTAATTTTATTTAATTAAAACAAATATATATAGCACAAAAAAACTAGCCCGAAGGCTAGCTTATGAATAGATGAAAATTTGAACACATTGCTGTGTCTAAGATAAATATAGCACATATTAATTACTATTAATAGAAAAATTATAGCG  >  CP000730/2087137‑2087334                                                                                                                                             |                                                          cTTGAAAACGCCCAAGGTAATATTAACATAAAATGGCTACTATTGCATTATCTAATTTTATTTAATTAAAACAAATATATATAGCACAAAAAAACTAGCCCGAAGGCTAGCTTATGAATAGATGAAAATTTGAACACATTg                                                           >  1:219450/1‑141 (MQ=255)                                                          ttatttaATTAAAACAAATATATATAGCACAAAAAAACTAGCCCGAAGGCTAGCTTATGAATAGATGAAAATTTGAACACATTGCTGTGTCTAAGATAAATATAGCACATATTAATTACTATTAATAGAAAAATTATAGCg  <  2:219450/141‑1 (MQ=255)                                                                                                                                             |                                                          CTTGAAAACGCCCAAGGTAATATTAACATAAAATGGCTACTATTGCATTATCTAATTTTATTTAATTAAAACAAATATATATAGCACAAAAAAACTAGCCCGAAGGCTAGCTTATGAATAGATGAAAATTTGAACACATTGCTGTGTCTAAGATAAATATAGCACATATTAATTACTATTAATAGAAAAATTATAGCG  >  CP000730/2087137‑2087334

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑