Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000730	45614	45658	45	2 [1]	[1] 2	USA300HOU_0038/ccrB	hypothetical protein/cassette chromosome recombinase B

GCTTGCACAATCCTTCTGTTTCTTCGAATCTGCAAATCCCAATCATTTCCCGATAAAAAATCATTGTGGGATGTTCTTTAGCAATTTCAATATAAGCATTGTATAGTTATGAAAAAATTACGACAATAACTGTTTCATTAGATAAGTGTTAT  >  CP000730/45648‑45799            |                                                                                                                                             gCTTGCACAATCCTTCTGTTTCTTCGAATCTGCAAATCCCAATCATTTCCCGATAAAAAATCATTGTGGGATGTTCTTTAGCAATTTCAATATAAGCATTGTATAGTTATGAAAAAATTACGACAATAACTGTTTCATTAg             >  2:22040/1‑141 (MQ=255)            ccTTCTGTTTCTTCGAATCTGCAAATCCCAATCATTTCCCGATAAAAAATCATTGTGGGATGTTCTTTAGCAATTTCAATATAAGCATTGTATAGTTATGAAAAAATTACGACAATAACTGTTTCATTAGATAAGTGTTAt  >  2:173361/1‑141 (MQ=255)            |                                                                                                                                             GCTTGCACAATCCTTCTGTTTCTTCGAATCTGCAAATCCCAATCATTTCCCGATAAAAAATCATTGTGGGATGTTCTTTAGCAATTTCAATATAAGCATTGTATAGTTATGAAAAAATTACGACAATAACTGTTTCATTAGATAAGTGTTAT  >  CP000730/45648‑45799

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑