Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 39,378 C→T 75.7% D586N (GAT→AAT)  mecA ← penicillin binding protein 2 prime

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP00073039,3780CT75.7% 119.9 / 32.7 75D586N (GAT→AAT) mecApenicillin binding protein 2 prime
Reads supporting (aligned to +/- strand):  ref base C (10/6);  new base T (28/25);  total (40/35)
Fisher's exact test for biased strand distribution p-value = 5.74e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.75e-01

AATAGCCATCATCATGTTTGGATTATCTTTATCATATGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATCTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATATTTTTCTTCCAAACTTTGTTTTTCGTGTCTTTTAATAAGTGAGGTGCGTTAATATTGCCATT  >  CP000730/39241‑39513
                                                                                                                                         |                                                                                                                                       
aaTAGCCATCATCATGTTTGGATTATCTTTATCATATGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATAttttt                                                                                                                                      >  1:389710/1‑140 (MQ=255)
  tAGCCATCATCATGTTTGGATTATCTTTATCATATGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATtttctt                                                                                                                                    <  2:717928/141‑1 (MQ=255)
  tAGCCATCATCATGTTTGGATTATCTTTATCATATGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATcttctt                                                                                                                                    <  1:54990/141‑1 (MQ=255)
  tAGCCATCATCATGTTTGGATTATCTTCATCATATGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATtttctt                                                                                                                                    <  2:973998/141‑1 (MQ=255)
   aGCCATCATCATGTTTGGATTATCTTTATCATATGATATAAACCACCCACTTTGTTTGCCGGTTTCTCTTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCttt                                                                                                                                   >  1:187217/1‑141 (MQ=255)
     ccATCATCCTGTTTGGATTATCTTTATCATATGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCttttt                                                                                                                                 >  2:1161184/1‑139 (MQ=255)
     ccATCATCATGTTTGGATTATCTTTATCATATGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTAt                                                                                                                                 >  1:1087698/1‑141 (MQ=255)
     ccATCATCATGTTTGGATTATCTTTATCATATGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTAt                                                                                                                                 >  2:222620/1‑141 (MQ=255)
     ccATCATCATGTTTGGATTATCTTTATCATATGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGACTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTAt                                                                                                                                 >  1:258678/1‑141 (MQ=255)
      catcatcatGTTTGGATTATCTTTATCATATGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTGGCCAATTAAGTTTGCATAAGATCTATAATTATCTTCTTTCtg                                                                                                                                >  2:599343/1‑141 (MQ=255)
       ttcatcatGTTTGGATTATCTTTATCATATGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTAtgt                                                                                                                               <  2:967119/140‑1 (MQ=255)
        tcatcatGTTTCGATTATCTTTATCATATGATCTAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATCTTCTTTAtgtg                                                                                                                              <  1:800444/141‑1 (MQ=255)
         cgtcatGTTTGGATTCTCGTTATTATATGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATgtgt                                                                                                                             <  2:934552/139‑1 (MQ=255)
         catcatGTTTGGATTATCTTTATCATATGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTGTAAATATTTTCTTTATgtgt                                                                                                                             <  1:730074/141‑1 (MQ=255)
          atcatGTTTGGATTATCTTTATCATATGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGtt                                                                                                                            >  2:79873/1‑141 (MQ=255)
           tcatGTTTGGATTATCTTTATCATATGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGttt                                                                                                                           <  2:677182/141‑1 (MQ=255)
            catGTTTGGATTATCTTTATCATATGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGgttt                                                                                                                          >  2:1128388/1‑141 (MQ=255)
             atGTTTGGATTATCTTTATCATATGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTttta                                                                                                                         >  1:346246/1‑141 (MQ=255)
               gTTTGGATTATCTTTATCATATGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATATTCTTTATGTGTtttatt                                                                                                                       >  1:366478/1‑141 (MQ=255)
                tttGGATTATCTTTATCATATGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTtttattt                                                                                                                      >  1:41134/1‑141 (MQ=255)
                  tGGATTATCTTTATCATATGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTAc                                                                                                                    <  2:42492/141‑1 (MQ=255)
                  tGGATTATCTTTATCATATGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTAc                                                                                                                    >  1:348442/1‑141 (MQ=255)
                          cTTTATCATATGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATGTATAACTATTTTCTTTATTTGTTTTATTTACGACttgtt                                                                                                            >  1:811535/1‑141 (MQ=255)
                          cTTTATCATATGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTAAGACttgtt                                                                                                            >  1:1082368/1‑141 (MQ=255)
                              aTCATATGATATAAACCACCCAATTTGTCTGCCAGTTTCCCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTCTCTTTATGTGTTTTATTTACGACTTGTTGCAt                                                                                                        >  1:1154232/1‑141 (MQ=255)
                               tCATATGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTGCATa                                                                                                       <  2:673135/141‑1 (MQ=255)
                                   attataaAAACCACCCAATTTGTCCTCCAGTTTCCCCTTGTTTCAATTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATATTCTTTATGTGTTTTATTTACGACTTGTTGCATACCAt                                                                                                   <  2:395469/138‑1 (MQ=255)
                                    tGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTAGCGGATTTGCCAATTAAGTTTGCATAAGATCTATACATATCTTCTGTATGTGTTTTATTTACGACTTGTTGCGTACCATc                                                                                                  >  2:907691/1‑141 (MQ=255)
                                    tGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATCTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATc                                                                                                  >  1:1163219/1‑141 (MQ=255)
                                       tataAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTACGCATTGTTTCCTACCATCGGt                                                                                               >  1:18789/1‑141 (MQ=255)
                                        ataAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGtt                                                                                              >  1:165721/1‑141 (MQ=255)
                                          aaaCCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATCTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTaa                                                                                            <  2:317995/141‑1 (MQ=255)
                                            accaccCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCACTTAAGTTTGCATAAGATCTATACATCTTTTCTTTATGTGTTTTATTTACGCCTTCTTGCATACCATCCGTTACTa                                                                                          >  2:1053773/1‑141 (MQ=255)
                                             ccaccCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTATTCAGTACCGGATTTGCCAATTAAGTTTGCATACGATCTATAAATATATTCTTTATGTGTTTTATCTACGACTTGTTGCATACCCTCAGCTAACAg                                                                                         >  2:649002/1‑141 (MQ=255)
                                                  cAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTCAGTTTGCATAAGATCTATAAATATCTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGa                                                                                    >  1:1158509/1‑141 (MQ=255)
                                                  cAATTTCTCTGCCAGTTTCTCCTTTTTTCATTTTGAGTTCAGCAGTACCGGATTTGCCAATTAAGTGTGCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGa                                                                                    <  1:329689/141‑1 (MQ=255)
                                                   aaTTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCCATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGat                                                                                   <  2:721574/141‑1 (MQ=255)
                                                   aaTTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATCTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCGTCAGTTAATAGATTGat                                                                                   >  2:335160/1‑141 (MQ=255)
                                                     tttGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGatat                                                                                 <  2:1007213/141‑1 (MQ=255)
                                                           tGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATCTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTCATAGATTGATATTTTCtt                                                                           >  1:234552/1‑141 (MQ=255)
                                                              cAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATATGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTgg                                                                        <  1:1062471/141‑1 (MQ=255)
                                                                gTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATCTTCTTTATGTGCTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGaa                                                                      <  1:694959/141‑1 (MQ=255)
                                                                    ctcCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGACAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAaataa                                                                  >  1:769774/1‑141 (MQ=255)
                                                                         tGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATCTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATAttt                                                             <  2:813972/141‑1 (MQ=255)
                                                                          gTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTTCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATAtttt                                                            <  1:523002/141‑1 (MQ=255)
                                                                          gTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATCTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAAGAGATTGATATTTTCTTTGGAAATAATAtttt                                                            <  2:1075416/141‑1 (MQ=255)
                                                                            ttCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATCTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCGTTGGAAATAATAtttttt                                                          >  2:566511/1‑140 (MQ=255)
                                                                                 tttGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATATTTTTCTTCCa                                                     <  1:92816/141‑1 (MQ=255)
                                                                                 tttGAGGTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATATTTTTCTTCCa                                                     <  1:354313/141‑1 (MQ=255)
                                                                                    gAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATGGATTGATATTTTCTTTGGAAATAATATTTTTCTTCGaaat                                                  >  1:328228/1‑140 (MQ=255)
                                                                                    gAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATATTTTTCTTCCAAAc                                                  >  2:911517/1‑141 (MQ=255)
                                                                                       ttCTGCAGGACCGGACTTGCCAATTAAGTTTGCATAAGCTCTATCAATATTTCCTTCATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATATTTTTCTTCCAAACttt                                               <  1:32854/141‑1 (MQ=255)
                                                                                             aGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTGCGTACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATATTTtttttcttttcttttttttt                                         >  2:868062/1‑127 (MQ=255)
                                                                                             aGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATATTTTTCTTCCAAACTTTGttttt                                         <  2:346246/141‑1 (MQ=255)
                                                                                             aGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATATTTTTCTTCCAAACTTTGttttt                                         <  2:6221/141‑1 (MQ=255)
                                                                                             aGTACCGGATTTGCCAACTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTTTTCTTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATATTTTTCTTCCAAACTTTGttttt                                         <  1:615485/141‑1 (MQ=255)
                                                                                              gaaCCGGATTTGCCAATGAAGTTTGCATAAGATCTAAAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTGAATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATATTTTTCTTCCAAACTTTGTTTTTc                                        <  1:638521/139‑1 (MQ=255)
                                                                                                tcctgATTTGCCAATTAAGTTTGCATACGATCTATAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATATTTTTCTTCCAAACTTTGTTTTTCgt                                      <  2:683114/137‑1 (MQ=255)
                                                                                                aCCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATATTTTTCTTCCAAACTTTGTTTTTCgt                                      >  1:998716/1‑141 (MQ=255)
                                                                                                aCCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATATTTTTCTTCCAAACTTTGTTTTTCgt                                      <  2:1020261/141‑1 (MQ=255)
                                                                                                aCCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATCTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGAGATTTTCTTTGGAAATAATATTTTTCTTCCAACCTTTGTTTTTCgt                                      >  2:164806/1‑141 (MQ=255)
                                                                                                   ggttttGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATATTTTTCTTCCAAACTTTGTTTTTCGTGTc                                   <  2:478013/138‑1 (MQ=255)
                                                                                                     aTTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAAGAATATTTTTCTTCCAAACTTTGTTTTTCGTGtttt                                 >  1:198396/1‑141 (MQ=255)
                                                                                                     aTTTGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTAAGACTTGTTGCATTCAATCAGTTAATGGATTGGTATTTTCTTTGGAAATAATATTTTTCTTTCTACCTTGTCTGTTCGTGTCtt                                 >  2:527372/1‑141 (MQ=255)
                                                                                                       ttGCCAATTAAGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATATTTTTCTTCCAAACTTTGTTTTTCGTGTCtttt                               <  1:587001/141‑1 (MQ=255)
                                                                                                        tGCCAATTAATTTTGCATAAGATCTATTAACATACTCTTTATGTGTTTTACTTACGACTTGTTGCATACCATCAGTTAATAGATTTATATTTTCTTTGGAAATAATCTTTTTCTTCCAAACTTTGTTTTTCGTGTCTTTta                              <  2:429256/141‑1 (MQ=255)
                                                                                                           cAATTAAGTTTGCATAAGATCTATAAATATCTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATATTTTTCTTCCAAACCTTGTTTTTCATGTCTTTaaata                           >  2:229288/1‑141 (MQ=255)
                                                                                                                aaGTTTGCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATATTTTTCTTCCAAACTTTGTTTTTCGTGTCTTTTAATAAGTGa                      >  2:360506/1‑141 (MQ=255)
                                                                                                                     tGCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATATTGTTCTTCCAAACTTTGTTTTTCGTGTCTTTTAATAAGTGAGGTGc                 <  1:1128388/141‑1 (MQ=255)
                                                                                                                     tGCATAAGATCTATAAATATATTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATCTTTTTCTTCCAAACTTTGTTTTTCGTGTCTTTTAATAAGTGAGGTGc                 <  2:767560/141‑1 (MQ=255)
                                                                                                                     tGCATAAGATCTATAAATATATTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATATTTTTCTTCCAAACTTTGTTTTTCGTGTCTTTTAATAAGTGAGGTGc                 <  2:716527/141‑1 (MQ=255)
                                                                                                                      gCATAAGATCTATAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATATTTTTCTTCCAAACTTTGTTTTTCGTGTCTTTTAATAAGTGAGGTGCg                >  2:193455/1‑141 (MQ=255)
                                                                                                                       cATAAGATCTATAAATATCTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATATTTTTCTTCCAAACTTTGTTTTTCGTGTCTTTTAATAAGTGAGGTGCGt               >  1:511106/1‑141 (MQ=255)
                                                                                                                        aTAAGATCTATAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATATTTTTCTTCCAAACTTTGTTTTTCGTGTCTTTTAATAAGTGAGGTGCGtt              <  2:187217/141‑1 (MQ=255)
                                                                                                                           aGATCTATAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTATTAGATTGATATTTTCTTTGGAAATAATATTTTTCTTCCAAACTTTGTTTTTCGTGTCTTTTAATGAGTGAGGTGGGGTAat           >  2:1071430/1‑141 (MQ=255)
                                                                                                                           aGATCTATAAATATTTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAACAAAAACACACCCCCAAACCACGTTTTTCGTGTCTTTTAATAAGTGAGGTTCGTTAat           >  2:469949/1‑141 (MQ=255)
                                                                                                                                tataAATATCTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATATTTTTCTTCCAAACTTTGTTTTTCGTGTCTTTTAATAAGTGAGGTGCGTTAATATTGc      <  2:511106/141‑1 (MQ=255)
                                                                                                                                   aaaTATTTTCTTTATGTTTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATATTTTTCTTCCAAACTTTGTTTTTCGTGTCTTTTAATAAGTGAGGTGCGTTAATATTGCCat   <  2:212581/141‑1 (MQ=255)
                                                                                                                                    aaTATTTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATATTTTTCTTCCAAACTTTGTTTTTCGTGTCGTTTAATAAGTGAGGGGCGTTAATATTGCCatt  >  1:587303/1‑141 (MQ=255)
                                                                                                                                         |                                                                                                                                       
AATAGCCATCATCATGTTTGGATTATCTTTATCATATGATATAAACCACCCAATTTGTCTGCCAGTTTCTCCTTGTTTCATTTTGAGTTCTGCAGTACCGGATTTGCCAATTAAGTTTGCATAAGATCTATAAATATCTTCTTTATGTGTTTTATTTACGACTTGTTGCATACCATCAGTTAATAGATTGATATTTTCTTTGGAAATAATATTTTTCTTCCAAACTTTGTTTTTCGTGTCTTTTAATAAGTGAGGTGCGTTAATATTGCCATT  >  CP000730/39241‑39513

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: