Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 1,151,773 T→C 5.1% I7T (ATC→ACC)  dinB → DNA‑directed DNA polymerase IV beta subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007301,151,7730TC 5.1% 320.7 / 5.7 111I7T (ATC→ACC) dinBDNA‑directed DNA polymerase IV beta subunit
Reads supporting (aligned to +/- strand):  ref base T (59/46);  new base C (3/3);  total (62/49)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.03e-01

Only 100 of 112 total aligned reads displayed.

ATTGATTTTTCACATCCCATATTTATCGGCTTTCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAACGACCATTAGATGAAATATCTGATGTAACGGAGTTA  >  CP000730/1151633‑1151912
                                                                                                                                              |                                                                                                                                           
attGATTTTTCACATCCCATATTTATCGGCTTTCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTAt                                                                                                                                             >  1:565498/1‑141 (MQ=255)
 ttGATTTTTCACATCCCATATTTATCGGCTTTCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATc                                                                                                                                            <  1:1098147/141‑1 (MQ=255)
 ttGATTTTTCACATCCCATATTTATCGGCTTTCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATc                                                                                                                                            <  1:929385/141‑1 (MQ=255)
   gATTTTTCACATCCCATATTTATCGGCTTTCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAATAGATGTTATCaa                                                                                                                                          <  1:845715/141‑1 (MQ=255)
    aTTTTTCTAATCCCATATTTATCGGCTTTCACCCTTAATTCATACCACCAACACTGGCCTGCGTACAAGTGTATATCTTAATGTTACTTGCTGGTCTGCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCaaa                                                                                                                                         <  2:1150328/141‑1 (MQ=255)
     tttttCACCTCCCATATTTATCGGCTTTCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAAc                                                                                                                                        <  1:303266/141‑1 (MQ=255)
     tttttCACATCCCATATTTATCGGCTTTCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAAc                                                                                                                                        <  1:303256/141‑1 (MQ=255)
      ttttCACATCCCATATTTATCGGCTTTCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTATTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCACACt                                                                                                                                       >  1:1015026/1‑141 (MQ=255)
         tCACATCCCATATTTATCGGCTTTCACCATTCATTTATAAATTATCATAAGAGGTATGGTCAAAGGTATATATTAATGATACGTCCTGGTCGTCTTTTTGTGGAAGGTTATTATGTGAAAAAATGATGTTATCAACCTCtt                                                                                                                                    >  2:191741/1‑141 (MQ=255)
         tCACATCCCATATTTATCGGCTTTCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGTAGTGTTATTATGACAAAAAAAGATGTTATCAAACTAtt                                                                                                                                    >  2:907/1‑141 (MQ=255)
         tCACATCCCATATTTATCGGCTTTCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGGGTGTTATTATTCTAAAAAAAGATGTTATAAACCTAtt                                                                                                                                    >  1:240478/1‑141 (MQ=255)
         tCACATCCCATATTTATCGGCTTTCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTAtt                                                                                                                                    >  1:436394/1‑141 (MQ=255)
         tCACATCCCATATTTATCGGCTTTCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTAtt                                                                                                                                    >  1:977232/1‑141 (MQ=255)
          cacaTCCCATATTTATCGGCTTTCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTa                                                                                                                                   >  1:1106168/1‑141 (MQ=255)
          cacaTCCCATATTTATCGGCTTTCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTa                                                                                                                                   >  2:164572/1‑141 (MQ=255)
            caTCCCCTATTTATCGGCTTTCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGa                                                                                                                                 <  1:1101698/141‑1 (MQ=255)
               cccATATTTATCGGCTTTCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAACGGTCTATAGGAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACa                                                                                                                              <  1:1177958/141‑1 (MQ=255)
               cccATATTTATCGGCTTTCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACa                                                                                                                              >  2:45456/1‑141 (MQ=255)
                ccATATTTATCGGCTTTCACCATTAATTTATAACTTCTCATAAGAGGTCAGGCAACAGGTATAAATTAATGATACTTGCTGGGCGTGGTTTTGTGGAGGGGTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACaa                                                                                                                             <  1:529381/141‑1 (MQ=255)
                ccATATTTATCGGCTTTCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACaa                                                                                                                             >  1:994825/1‑141 (MQ=255)
                      ttATCGGCTTTCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGTCGAAAAAAGATGTTATCAAACTATTAGAACAAATTGCt                                                                                                                       >  2:777322/1‑141 (MQ=255)
                         tCGGCTTTCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTATTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACt                                                                                                                    >  1:809157/1‑141 (MQ=255)
                           ggCTTTCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGGTACTta                                                                                                                  >  1:1106034/1‑141 (MQ=255)
                            gCTTTCAACCTTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGCTGTTATCAAACTATTAGAACAAATTACTACTtat                                                                                                                 >  2:732960/1‑141 (MQ=255)
                             cTTTCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAGAGTTATGTATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTtata                                                                                                                >  1:40674/1‑141 (MQ=255)
                             cTTTCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAACCTATTAGAACAAATTGCTACTtata                                                                                                                >  2:161697/1‑141 (MQ=255)
                             cTTTCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTtata                                                                                                                >  2:1138888/1‑141 (MQ=255)
                             cTTTCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTtata                                                                                                                >  1:173571/1‑141 (MQ=255)
                               ttCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAACAAAAGATGTTACCAAACTATTAGAACAAATTGCTACTTATATg                                                                                                              >  2:323043/1‑141 (MQ=255)
                               ttCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATg                                                                                                              <  1:955104/141‑1 (MQ=255)
                                ttaCCATTATTTTATAAATTATCATAAGGGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATgg                                                                                                             <  1:339051/139‑1 (MQ=255)
                                   ccATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCATACTATTAGCACAAATTGCTACTTATATGaaa                                                                                                           >  2:1096005/1‑141 (MQ=255)
                                     aTTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGGGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTa                                                                                                        >  2:1178279/1‑141 (MQ=255)
                                      ttAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTaa                                                                                                       <  1:179918/141‑1 (MQ=255)
                                       tAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAGAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAGTTaaa                                                                                                      >  1:95053/1‑141 (MQ=255)
                                             ataAGTGATCAGGAGGGGGCAGGACAAGGGGTTATATTAAGGATACGTCCGGGTCTTCTTTTTAGGGAGTGTCATTATGGCAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTAGATGGAATTAAAAGGGGa                                                                                                <  2:50631/141‑1 (MQ=255)
                                                 aaTTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGaaaa                                                                                             <  2:313109/141‑1 (MQ=255)
                                                  aTTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAAt                                                                                            <  2:195341/141‑1 (MQ=255)
                                                   ttATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATa                                                                                           <  1:1062398/141‑1 (MQ=255)
                                                    tATGATAAGAGGTCAGGATAAAAGTATATATTAATGATAAGTCTTTGTTTTATTTTTATGGATTGTTATTATGTCAAAAAGAGAGGTTATCAAGCTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATAc                                                                                          <  2:400068/141‑1 (MQ=255)
                                                     tttaTAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGCAAATACt                                                                                         <  1:124913/138‑1 (MQ=255)
                                                     aTCAGAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGAAAAAAAAAAAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACt                                                                                         <  2:1001916/141‑1 (MQ=255)
                                                       cATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACttt                                                                                       >  1:659322/1‑141 (MQ=255)
                                                        aTAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTCCCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACtttt                                                                                      <  2:69199/141‑1 (MQ=255)
                                                           agagGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTaaa                                                                                   >  1:734786/1‑141 (MQ=255)
                                                             agGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAat                                                                                 <  2:977503/141‑1 (MQ=255)
                                                               gTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAatat                                                                               >  2:923413/1‑141 (MQ=255)
                                                               gTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAaaat                                                                               >  2:680245/1‑141 (MQ=255)
                                                                   ggACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTGAAAGGGGAAAATACTTTTAAAATAACAGc                                                                           >  2:42652/1‑141 (MQ=255)
                                                                    gACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCg                                                                          <  1:719884/141‑1 (MQ=255)
                                                                    gACAAAGGTATATATTAATGAGACGTCCTGGTCGTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAAAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCg                                                                          <  1:907930/141‑1 (MQ=255)
                                                                     aCAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGt                                                                         >  1:675565/1‑141 (MQ=255)
                                                                             atatatTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATCATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATCATTTTAAAAAATCAGAGTATCGaaaa                                                                 >  2:639095/1‑141 (MQ=255)
                                                                              tatatTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAag                                                                <  1:307451/141‑1 (MQ=255)
                                                                                  ttAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAagcagc                                                            <  2:240478/141‑1 (MQ=255)
                                                                                      tGATTCGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATTTCAGCGTATCGAAAAGCAGCTCaa                                                        <  1:766078/141‑1 (MQ=255)
                                                                                      tGATACGTCCTGGTCTTCTTTTTATGGAGTGTTAATATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCaa                                                        <  1:1041948/141‑1 (MQ=255)
                                                                                       gATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCaaa                                                       <  1:410050/141‑1 (MQ=255)
                                                                                        aTACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAg                                                      >  1:442621/1‑141 (MQ=255)
                                                                                           cGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGATAAGCAGCTCAAAGTCt                                                   >  1:644965/1‑141 (MQ=255)
                                                                                           cGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCGAAGTCt                                                   >  1:55350/1‑141 (MQ=255)
                                                                                           cGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACGATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGACAATACTTTTAAAATATCAGCGTCTCGAAAAGCAGCCCAAAGTCt                                                   >  1:107034/1‑141 (MQ=255)
                                                                                            gTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCTAACTATTGGAACAAATTGCTACTTATATGGAATTAAAAAGGGAAAATACTTTTAAAATATCAGCGGATCGAAAAGCAGCTcgcaggcgt                                                  >  1:35454/1‑133 (MQ=255)
                                                                                            gTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCtt                                                  >  1:974424/1‑141 (MQ=255)
                                                                                             tCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTg                                                 <  2:928143/141‑1 (MQ=255)
                                                                                              ccTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGa                                                >  1:141685/1‑141 (MQ=255)
                                                                                                tGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAAt                                              >  1:696974/1‑141 (MQ=255)
                                                                                                 ggTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAAtt                                             >  1:17317/1‑141 (MQ=255)
                                                                                                  gTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTa                                            <  1:796034/141‑1 (MQ=255)
                                                                                                  gTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAg                                           >  2:85019/1‑141 (MQ=255)
                                                                                                    tttcttTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGACTTAAACGGGGAAAATAATTTTACAATATCCGAGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGa                                          <  2:1002530/140‑1 (MQ=255)
                                                                                                     ttcttTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGAt                                         <  2:603649/141‑1 (MQ=255)
                                                                                                      tcttTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATAGAATTAAAAGGGGAAAATACTTTTAAAATATAAGCGTATCGAAAAGCAGCTCAAAGTCGTGAATTAGATg                                        >  1:499477/1‑141 (MQ=255)
                                                                                                          ttttATGGGGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAAc                                     <  1:586838/141‑1 (MQ=255)
                                                                                                           tttATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAACg                                    <  1:71440/141‑1 (MQ=255)
                                                                                                           ttaatagaatgtTATTATGACAAAAAAAGATGTTATCAAACTATTACAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAACg                                    <  2:950223/132‑1 (MQ=255)
                                                                                                                      ttattaTGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAACGACCATTAGATg                         <  1:213040/141‑1 (MQ=255)
                                                                                                                       aaaaaaaaaaaaaaaaGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAACGACCATTAGATGa                        <  2:1176001/132‑1 (MQ=255)
                                                                                                                        attatGACAAAAAAAGCTGTTATCAAACTATCAGAACAAATTGCAACTTATACGGAACTAAAAGGGGAAAAAACCTTTAAAATATCAGCGTATCGAAAAGCAGCCCAAAGTCTTGAATTAGATGAACGACCATTAGATGaa                       >  2:343538/1‑141 (MQ=255)
                                                                                                                        attatGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAACGACCATTAGATGaa                       >  1:760673/1‑141 (MQ=255)
                                                                                                                        attatGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAACGACCATTAGATGaa                       >  1:464844/1‑141 (MQ=255)
                                                                                                                        attatGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAACGACCATTAGATGaa                       >  1:422705/1‑141 (MQ=255)
                                                                                                                           atGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAACGACCATTAGATGAAata                    >  1:120137/1‑141 (MQ=255)
                                                                                                                           atGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAACGACCATTAGATGAAatat                   <  1:85019/141‑1 (MQ=255)
                                                                                                                               cAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCATATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAACGACCATTAGATGGAATAGCTg                >  2:538300/1‑141 (MQ=255)
                                                                                                                               aaaaaaaaGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAACGACCATTAGATGAAATATCTg                <  2:565498/140‑1 (MQ=255)
                                                                                                                                aaaaaaaGATGTTACCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAACGACCATTAGATGAAATATCTGa               <  1:323043/141‑1 (MQ=255)
                                                                                                                                aaaaaaaGATGTTACCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAACGACCATTAGATGAAATATCTGa               <  1:1098921/141‑1 (MQ=255)
                                                                                                                                        gtGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAACGACCATTAGATGAAATATCTGATGTAACgg       <  2:1015026/140‑1 (MQ=255)
                                                                                                                                        aTGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAACGCGCTACAATACTTGTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGGCGTGAAGTAGATGAACGACCGTTAGATGAAATATCTGATGTAACgg       >  1:399004/1‑141 (MQ=255)
                                                                                                                                        aTGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAACGACCGTTAGATGAAATATCTGATGTAAggg       >  1:17583/1‑141 (MQ=255)
                                                                                                                                        aTGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAACGACCATTAGATGAAATATCTGATGTAACgg       >  1:85150/1‑141 (MQ=255)
                                                                                                                                        aTGTTACCAGACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAACGACCATTAGATGAAATATCTGATGTAACgg       >  1:877844/1‑141 (MQ=255)
                                                                                                                                         tGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAACGACCATTAGATGAAATATCTGATGTAACGGa      <  1:473454/141‑1 (MQ=255)
                                                                                                                                          gTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAACGACCATTAGATGAAATATCTGATGTAACGGAg     >  2:352638/1‑141 (MQ=255)
                                                                                                                                          gTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAACGACCATTAGATGAAATATCTGATGTAACGGAg     <  2:450247/141‑1 (MQ=255)
                                                                                                                                           ttATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAACGACCATTAGATGAAATATCTGATGTAACGGAGt    >  2:597682/1‑141 (MQ=255)
                                                                                                                                           ttATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAACGACCATTAGATGAAATATCTGATGTAACGGAGt    <  1:45456/141‑1 (MQ=255)
                                                                                                                                            tATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAACGACCATTAGATGAAATATCTGATGTAACGGAGtt   <  1:88796/141‑1 (MQ=255)
                                                                                                                                             aTCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAACGACCATTAGATGAAATATCTGATGTAACGGAGTTa  >  1:899630/1‑141 (MQ=255)
                                                                                                                                              |                                                                                                                                           
ATTGATTTTTCACATCCCATATTTATCGGCTTTCACCATTAATTTATAAATTATCATAAGAGGTCAGGACAAAGGTATATATTAATGATACGTCCTGGTCTTCTTTTTATGGAGTGTTATTATGACAAAAAAAGATGTTATCAAACTATTAGAACAAATTGCTACTTATATGGAATTAAAAGGGGAAAATACTTTTAAAATATCAGCGTATCGAAAAGCAGCTCAAAGTCTTGAATTAGATGAACGACCATTAGATGAAATATCTGATGTAACGGAGTTA  >  CP000730/1151633‑1151912

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: