Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 2,542,325 G→T 70.2% A29S (GCC→TCC)  hlgA → gamma‑hemolysin component A

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007302,542,3250GT70.2% 107.1 / 70.9 104A29S (GCC→TCC) hlgAgamma‑hemolysin component A
Reads supporting (aligned to +/- strand):  ref base G (14/16);  new base T (37/31);  total (53/51)
Fisher's exact test for biased strand distribution p-value = 5.17e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.22e-01

Only 100 of 104 total aligned reads displayed.

TTAACTTTTAACGAACAGTTAATTCGAAAACGCTTACAAATGGATTATTATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATAGCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAACACAAGACATTACTAGCAAACGATTAGCTATAACTCAAAACATTCAAT  >  CP000730/2542186‑2542460
                                                                                                                                             |                                                                                                                                       
ttAACTTTTAACGAACAGTTAATTCGAAAACGCTTACAAATGGATTATTATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATAGc                                                                                                                                        <  1:671091/141‑1 (MQ=255)
   aCTTTTAACGAACAGTTAATTCGCAAACGTTTACAACTTGCTTTTTCCAATTAGAAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATcccc                                                                                                                                     <  1:562573/141‑1 (MQ=255)
      tttAACGAACAGTTAATTCGAAAACGCTTACAAATGGATTATTATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCttt                                                                                                                                  >  2:187032/1‑141 (MQ=255)
         aaCGAACAGTTAATTCGAAAACGCTTACAAATGGATTATTAGATATATGAACTTAAAATTAAGTAGAAAGAGAGTGATTTCTATGATTAACAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATAGCCCCTTTAGc                                                                                                                               <  2:361473/141‑1 (MQ=255)
             aaCAGTTAATTCGAAAACGCTTACAAATGGATTATTATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAAt                                                                                                                           >  1:828937/1‑141 (MQ=255)
              aCAGTTAATTCGAAAACGCTTACGAATGGATTATTATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATc                                                                                                                          >  2:856929/1‑141 (MQ=255)
              aCAGTTAATTCGAAAACGCTTACAAATGGATTATTATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATAACCCCTTTAGCCAATc                                                                                                                          >  2:1174285/1‑141 (MQ=255)
              aCAGTTAATTCGAAAACGCTTACAAATGGATTAATATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATGAAAAATGAAATATTAACAGCAACTTTAGCAGTTGGTTTAATAGAACCTTTAAACAATc                                                                                                                          >  2:790407/1‑141 (MQ=255)
                 gTTAATTCGAAAACGCTTACAAATGGATTATTATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCAt                                                                                                                       <  2:410575/141‑1 (MQ=255)
                 gTTAATTCGAAAACGCTTACAAATGGATTATTATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAATTGGTTTAATAACCCCTTTAGCcaatcaat                                                                                                                       >  2:483075/1‑141 (MQ=255)
                   tAATTCGAAAACGCTTACAAATGGATTATTATATATATGGACTTAAAATTAAATAGAAAGAAGGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGGTGGTTTAATATCCCGTTTAGCCAATCCAttt                                                                                                                     >  2:599928/1‑141 (MQ=255)
                    aaTTCGAAAACGCTTACAAATGGATTATTATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTta                                                                                                                    >  2:246204/1‑141 (MQ=255)
                     aTTCGAAAACGCTTACAAATGGATTATTATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTtat                                                                                                                   <  2:547777/141‑1 (MQ=255)
                     aTTCGAAAACGCTTACAAATGGATTATTATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATAGCCCCTTTAGCCAATCCATTtat                                                                                                                   >  1:480380/1‑141 (MQ=255)
                     aTTCGAAAACGCTTACAAATGGATTATTATATAAATGCACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAACAAAATATTAAAAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTtaa                                                                                                                   >  2:491813/1‑140 (MQ=255)
                      ttCGAAAACGCTTACAAATGGATTATTATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATAGCCCCTTTAGCCAATCCATTtata                                                                                                                  <  1:971439/141‑1 (MQ=255)
                       tCGCAAACGGTTACAAATGGATTAATATATGAAGGTACTTAAAATAAAATAGAAAGAAATGGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAg                                                                                                                 <  2:823061/141‑1 (MQ=255)
                         gAAAACGATTACAAATGGATTATTATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGaa                                                                                                               <  2:203596/141‑1 (MQ=255)
                           aaaCGCTTACAAATGGATTATTATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAACTACTATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCAAATCCATTTATAGAAAt                                                                                                             >  1:276559/1‑141 (MQ=255)
                           aaaCGCTTACAAATGGATTATTATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGTAACTTTAGCAGTTGGTTTACTACACCCGTTAGCCAATCCATTTATAGAAAt                                                                                                             <  2:849516/141‑1 (MQ=255)
                           aaaCGCTTACAAATGGATTATTATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAAt                                                                                                             <  1:841941/141‑1 (MQ=255)
                           aaaCGCTTACAAATGGATTATTATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATAGCCCCTTTAGCCAATCCATTTATAGAAAt                                                                                                             >  1:234636/1‑141 (MQ=255)
                             aCGCTTACAAATGGATTATTATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTCTGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCAAATCCATTTATAGAAAttt                                                                                                           >  1:1144564/1‑141 (MQ=255)
                             aCGCTTACAAATGGATTATTATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAACTATTCACCGCACCTTTAGCAGTTGGATTAATATCCCCTTTAGCCAATCCATTTATAGAAAttt                                                                                                           <  2:962615/141‑1 (MQ=255)
                             aCGCTTACAAATGGATTATTATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAAttt                                                                                                           >  1:1096808/1‑141 (MQ=255)
                              cGCTTTCAAGGGGATTATTTTATTTATGTACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTACAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAACCAATTCATTTATTGAAAtttt                                                                                                          >  2:761106/1‑140 (MQ=255)
                                    aaaaTGGATTAGTATACATATGAACTTAAAATTAAATACAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGc                                                                                                    <  1:428777/140‑1 (MQ=255)
                                      aaTGGATTATTATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAg                                                                                                  <  1:965095/141‑1 (MQ=255)
                                       aTGGATTATTATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATAGCCCCTTTAGCCAATCCATTTATAGAAATTTCTGAAGCAGa                                                                                                 >  1:239413/1‑141 (MQ=255)
                                          gATTATTATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATAGCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGaaaa                                                                                              >  2:422376/1‑141 (MQ=255)
                                          gATTATTATATATATGAACTGAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGaaaa                                                                                              <  2:945600/141‑1 (MQ=255)
                                           attattATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATAGCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAAt                                                                                             <  2:826784/141‑1 (MQ=255)
                                           attattATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATAGCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAAt                                                                                             <  1:849414/141‑1 (MQ=255)
                                           attattATATATATGAACTTAAAATTAAATAGAAAGAAAGAACCTAAAGTCATTAACAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAAt                                                                                             <  1:388025/141‑1 (MQ=255)
                                            ttattaTATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCAATTTATAGAAATTTCTAAAGCAGAAAATa                                                                                            >  2:467004/1‑141 (MQ=255)
                                            ttattaTATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATACCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGACAATa                                                                                            >  2:291749/1‑141 (MQ=255)
                                             tattatATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATaa                                                                                           >  1:109491/1‑141 (MQ=255)
                                                   atatatGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATaga                                                                                     <  1:467284/141‑1 (MQ=255)
                                                    tatatGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATagaa                                                                                    <  1:48319/141‑1 (MQ=255)
                                                       atGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGat                                                                                 <  2:571912/141‑1 (MQ=255)
                                                       agtaaCCTAAAATTAAATATAAACAAAGTCCTTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATAGCCTCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGat                                                                                 <  1:483075/138‑1 (MQ=255)
                                                        tGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTTGTTTAATAGCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGata                                                                                <  2:358952/141‑1 (MQ=255)
                                                        tGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATAGCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGata                                                                                <  1:790407/141‑1 (MQ=255)
                                                             ttAAAATTAAATAGAAAGAAAGTTATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGc                                                                           <  2:594454/141‑1 (MQ=255)
                                                              tAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGcc                                                                          <  2:1028626/141‑1 (MQ=255)
                                                               aaaaTTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCa                                                                         >  1:47509/1‑141 (MQ=255)
                                                               aaaaTTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATAGCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCa                                                                         >  2:967243/1‑141 (MQ=255)
                                                                 aaTTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAg                                                                       >  1:267379/1‑141 (MQ=255)
                                                                 aaTTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGACAAg                                                                       >  2:641398/1‑141 (MQ=255)
                                                                 aaTTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCAGCCAAg                                                                       >  2:963510/1‑141 (MQ=255)
                                                                 aaTTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCAATTTATAGAAATTTCTAACGCAGAAAATAAGATAGAAGCTATCACCCAAg                                                                       >  2:821335/1‑141 (MQ=255)
                                                                 aaTTAAATAGAAAGAAAGCGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGACAATAAGATAGAAGTTATAGGCCAAg                                                                       >  2:829504/1‑141 (MQ=255)
                                                                  aTTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAgg                                                                      <  1:1092374/141‑1 (MQ=255)
                                                                  aTTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAAGCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAgg                                                                      <  1:763695/141‑1 (MQ=255)
                                                                   ttAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGt                                                                     <  2:490315/141‑1 (MQ=255)
                                                                    tAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTg                                                                    <  1:355116/141‑1 (MQ=255)
                                                                        tAGAAAGACAGTGATTTCTATGATTAAAATTAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATAGCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGa                                                                <  2:511610/141‑1 (MQ=255)
                                                                        tAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGa                                                                <  1:90973/141‑1 (MQ=255)
                                                                        tAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGa                                                                <  1:982927/141‑1 (MQ=255)
                                                                          gaaagaaaGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTCGGTAATAGAACCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGaaa                                                              <  1:275755/141‑1 (MQ=255)
                                                                           aaagaaagTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAat                                                             >  2:106328/1‑141 (MQ=255)
                                                                            aagaaagTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATAGCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAatc                                                            >  1:1064312/1‑141 (MQ=255)
                                                                             agaaagTGATTTCTATGATTAAAAATTAAATGTTAAAAGGACCTCAGCACTGTGTTTGAATATCCCCTTTTGCCAGTCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAatca                                                           <  1:270104/141‑1 (MQ=255)
                                                                             agaaagTGATTTCTATGATTAAAAATAAAATATTAACAGCCACTTTGGCCGTTGGATTGATATCCCCTTTAGCCAATACATTTATAGAAAGTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAatca                                                           <  2:1149924/141‑1 (MQ=255)
                                                                                  gTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCaaa                                                      <  1:912664/141‑1 (MQ=255)
                                                                                   tgatttatgttggtAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCaaaa                                                     >  2:733506/14‑141 (MQ=255)
                                                                                    gATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGCAAATAAGATAGAAGATATCGGCAAAGGTGCAGAAataaaaaaaaa                                                    >  2:710793/1‑132 (MQ=255)
                                                                                     aTTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGa                                                   >  1:770010/1‑141 (MQ=255)
                                                                                     aTTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGa                                                   <  2:1032165/141‑1 (MQ=255)
                                                                                       ttCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGCAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAac                                                 >  1:805089/1‑141 (MQ=255)
                                                                                       ttCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAac                                                 <  2:599484/141‑1 (MQ=255)
                                                                                       ttCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAac                                                 >  2:858571/1‑141 (MQ=255)
                                                                                       ttCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATAGCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAACTCCTCAAAAGAac                                                 >  2:668765/1‑141 (MQ=255)
                                                                                            tGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCGTTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAACACaaa                                            >  2:743905/1‑140 (MQ=255)
                                                                                            acaTTAAAAATAAAATATTCACACCAACTTTAGCAGTTGGTTTAATACCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAACACAAg                                            <  1:599928/139‑1 (MQ=255)
                                                                                             tgtgtaaaataaaagTATTAACAGCAACTTTAGCAGTTAGTTTAATAGCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAATCAGAAACTAATATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAACACAAg                                            <  2:838133/136‑1 (MQ=255)
                                                                                                  aaaataaaatATTAACAGCAACCTTAGCAGTTGGTTTAATAGCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAACACAAGACATTa                                      <  1:477474/141‑1 (MQ=255)
                                                                                                   aaataaaataTTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAACACAAGACATTAc                                     >  2:1192286/1‑141 (MQ=255)
                                                                                                       aaaataTTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAACACAAGACATTATTAGc                                 <  2:828937/141‑1 (MQ=255)
                                                                                                        aaataTTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGACATCATCAAGAGAACACAAGACATTACTAGCa                                >  1:400874/1‑141 (MQ=255)
                                                                                                        aaataTTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAACACAAGACATTACTAGCa                                >  1:953070/1‑141 (MQ=255)
                                                                                                        aaataTTAACAGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAACACAAGACATTACTAGCa                                >  2:50272/1‑141 (MQ=255)
                                                                                                            tatTAACAGCAACTTTAGCAGTTGGTTTAATAGCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAACACAAGACATTACTAGCAAAc                             <  1:742291/141‑1 (MQ=255)
                                                                                                             atTAACAGCAACTTTAGCAGTTGGTTTAATAGCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAACACAAGACATTACTAGCAAACg                            <  2:1097586/141‑1 (MQ=255)
                                                                                                              ttAACAGCCACTTTAGCAGTTGGTTTAATAGCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGTCCAAGGTGCAGAAATCATCAAAATAACACAAGACATTACTAGCAAACGa                           <  1:398188/141‑1 (MQ=255)
                                                                                                                   aGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAACACAAGACATTACTAGCAAGCGATTAGc                      >  2:1198399/1‑141 (MQ=255)
                                                                                                                   aGCAACTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAACACAAGACATTACTAGCAAACGATTAGc                      >  2:428050/1‑141 (MQ=255)
                                                                                                                    caaaCTTTAGCAATTTGTTAAATATCCCCTTTAGCCAACGCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCCGCCAAGGTGCAGAAATCATCAAAAGAACACAAGACATTACTAGCAAACGATTAGCt                     <  1:829504/139‑1 (MQ=255)
                                                                                                                       aCTTTAGCAGTTGGTTTAATATCCCCTTTAGCCAATACATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAACACAAGACATTACTAGCAAACGATTAGCtata                  >  2:437274/1‑141 (MQ=255)
                                                                                                                         tttAGCAGTTGGTTTAATAGCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAACACAAGACATTACTAGCAAACGATTAGCTATAAc                >  1:380918/1‑141 (MQ=255)
                                                                                                                         ccaaGCAGTCGGATTAATAACCCCTGTAGCCAATCCAGTTATACAAAATTCTAAAGCAGAAAACAAGATAGAAGATACCGTCCAACCTGCACAAATCATCAAAATAACACAAGACATTACTAGCAAACGATTAGCTATAAc                <  2:454739/138‑1 (MQ=255)
                                                                                                                          ttAGCAGTTGGTTTAATAGCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAACACAAGACATTACTAGCAAACGATTAGCTATAAcc               >  2:30307/1‑140 (MQ=255)
                                                                                                                           tAGCAGTTGGTTTAATAGCCCCTTTAGCCAATCCATTTATAGAAATTACTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAACACAAGACATTACTAGCAAACGATTAGCTATAACTc              >  2:774665/1‑141 (MQ=255)
                                                                                                                            aGCAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAACACAAGACATTACTAGCAAACGATTAGCTATAACTCa             >  1:1161788/1‑141 (MQ=255)
                                                                                                                              cAGTTGGTTTAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAACACAAGACATTACTAGCAAACGATTAGCTATAACTCaaa           <  1:462191/141‑1 (MQ=255)
                                                                                                                                gTTGGTTTAATATCCCCTTTAGCCAATCCATTTGTAGAAATTTCTAAAGCAGAAAATAAGCTAGAAGATATCGGCCAAGGTGTAGAAATGATCAAAAGAACACAAGACATTACTAGCAAACGAGTAGCTCTaaatacaaaa         >  2:790465/1‑133 (MQ=255)
                                                                                                                                     gTTTAATAGCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGCAACTCAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAACACAAGACATTACTAGCAAACGATTAGCTATAACTCAAAACATTc     <  1:868542/141‑1 (MQ=255)
                                                                                                                                       ttAATAGCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAACACAAGACATTACTAGCAAACTATTAGCTATAACTCAAAAAATTCaa   >  2:32464/1‑141 (MQ=255)
                                                                                                                                        tAATATCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAACACAAGACATTACTAGCAAACGATTAGCTATAACTCAAAAAATTCAAt  >  2:368307/1‑141 (MQ=255)
                                                                                                                                        tAATAGCCCCTTTAGCAAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAACACAAGACATTACTAGCAAACGATTAGCTATAACTCAAAACATTCAAt  >  1:665236/1‑141 (MQ=255)
                                                                                                                                             |                                                                                                                                       
TTAACTTTTAACGAACAGTTAATTCGAAAACGCTTACAAATGGATTATTATATATATGAACTTAAAATTAAATAGAAAGAAAGTGATTTCTATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATAGCCCCTTTAGCCAATCCATTTATAGAAATTTCTAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAACACAAGACATTACTAGCAAACGATTAGCTATAACTCAAAACATTCAAT  >  CP000730/2542186‑2542460

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: