Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC CP000730 2,501,188 Δ3,014 bp 100% USA300HOU_2364 USA300HOU_2364

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ CP000730 2501188 2504201 3014 54 [1] [1] 54 USA300HOU_2364 USA300HOU_2364

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 = 25011871 (0.020)45 (1.100) 37/230 NT 97.9% intergenic (+1198/‑290) USA300HOU_2363/USA300HOU_2364 hypothetical protein/AraC transcriptional regulator
?CP000730 2504202 = 1 (0.020)intergenic (+620/‑138) USA300HOU_2364/USA300HOU_2365 AraC transcriptional regulator/hypothetical protein

TAAATAATGGCGATAAAATTTAAGTCATGGGTACATTTAATGTTTTTTGATTCAAACTTCCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP000730/2501039‑2501187
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgtattgttttttAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATTAATTTTATGTAATATAAATACTGCATTTGCAAACTGTTGCACTTTTAGGTATAACAGAATTAACTACATTTAAGGAGATTGATGAACC  >  CP000730/2504202‑2504339
                                                                                                                                                                                                                                                                                               
TAAATAATGGCGATAAAATTTAAGTCATGGGTACATTTAATGTTTTTTGATTCAAACTTCCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTA                                                                                                                                                     >  1:548672/1‑140
TAAATAATGGCGATAAAATTTAAGTCATGGGTACATTTAATGTTTTTTGATTCAAACTTCCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTA                                                                                                                                                     <  1:451218/140‑1
TAAATAATGGCGATAAAATTTAAGTCATGGGTACATTTAATGTTTTTTGATTCAAACTTCCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTA                                                                                                                                                     >  1:380987/1‑140
   ATAATGGCGATAAAATTTAAGTCATGGGTACATTTAATGTTTTTTGATTCAAACTTCCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTG                                                                                                                                                  <  1:484720/140‑1
        GGCGATAAAATTTAAGTCATGGGTACATTTAATGTTTTTTGATTCAAACTTCCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTGGTTCAAAATGCCTCGGTATTGTTTTT                                                                                                                                             >  2:97318/1‑140
        GGCGATAAAATTTAAGTCATGGGTACATTTAATGTTTTTTGATTCAAACTTCCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTT                                                                                                                                             >  1:228246/1‑140
          CGATAAAATTTAAGTCATGGGTACATTTAATGTTTTTTGATTCAAACTTCCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTAAATAAAAATAAAAGATTTTATAGTTAGTTCAAAATGGCTATGTATTGTTTTTTA                                                                                                                                           >  2:114058/1‑140
                AATTTAAGTCATGGGTACATTTAATGTTTTTTGATTCAAACTTCCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACA                                                                                                                                     <  1:263109/140‑1
                 ATTTAAGTCATGGGTACATTTAATGTTTTTTGATTCAAACTTCCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACAC                                                                                                                                    <  1:245348/140‑1
                 ATTTAAGTCATGGGCACATTTAATGTTTTTTGATTCGAACTTGCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGCTTAGCAAGTTAGTTCAAAATGGCTACGTATTGTTTTTTAGATACAC                                                                                                                                    <  1:387269/140‑1
                 ATTTAAATAATGGGTACATTTAATGTTTTTTGAGTCAAACTTCCATTGTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAAGAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACAC                                                                                                                                    <  2:98768/140‑1
                   TTAAGTCATGGGTACATTTAATGTTTTTTGATTCAAATTTCCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTT                                                                                                                                  <  1:220747/140‑1
                       GTCATCGTTACATTTAATGTTTTTTGATTCAAACTTCCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATT                                                                                                                              <  1:247692/140‑1
                          ATGGGTATATTTAATTTTTTTTGATTCAAACTTCCACTTTGGTGAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAATAGTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCAC                                                                                                                           <  1:264191/140‑1
                                ACATTTAATGTTTTTTGATTCAAACTTCCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAATATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAA                                                                                                                     >  2:352346/1‑140
                                ACATTTAATGTTTTTTGATTCAAACTTCCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTAAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAA                                                                                                                     >  1:185378/1‑140
                                     TAATGTTTTTTGATTCAAACTTCCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGA                                                                                                                >  1:256815/1‑140
                                       ATGTTTTTTGATTCAAACTTCCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATT                                                                                                              <  2:422495/140‑1
                                             TTTGATTCAAACTTCCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTG                                                                                                        <  1:461645/140‑1
                                              TTGATTCAAATTAAACTTTTGGTTAATTTGCTTTTTTTAAAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGGTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGT                                                                                                       <  2:414004/140‑1
                                              TTGATTCAAACTTCCATTTTGGTTAATTTGCTTTTTTTATAACATAGTTGAATATCAAGAAAAGATTAGCAAGTTAGTTCAAAATTGCTATTTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGT                                                                                                       <  2:130191/140‑1
                                                  TTCAAACTTCCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCT                                                                                                   >  1:57048/1‑140
                                                  TTCAAACTTCCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCT                                                                                                   <  2:210694/140‑1
                                                    CAAACTTCCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTT                                                                                                 <  1:396372/140‑1
                                                       actgtCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTA                                                                                              <  2:165954/135‑1
                                                        CTTCCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTGTTTTTAA                                                                                             >  1:109626/1‑140
                                                           CCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGTAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATT                                                                                          <  2:59346/140‑1
                                                           CCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATT                                                                                          <  2:279231/140‑1
                                                           CCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATT                                                                                          >  1:135875/1‑140
                                                           CCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATT                                                                                          <  2:457691/140‑1
                                                            CATTTTGGTCAATTTGCTTTTTTTATAACATGTTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATTA                                                                                         <  1:412733/140‑1
                                                             ATTTTGTTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATTAA                                                                                        <  2:280776/140‑1
                                                                          TGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGGTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATTAATTTTATGTAATAT                                                                           >  2:480945/1‑140
                                                                            CTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATTAATTTTATGTAATATAA                                                                         >  1:19102/1‑140
                                                                                        CATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATTGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATTAATTTTATGTAATATAAATACTGCATTTG                                                             <  1:85107/140‑1
                                                                                            GTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATTAATTTTATGTAATATAAATACTGCATTTGCAAA                                                         <  2:35639/140‑1
                                                                                                 ATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATTAATTTTATGTAATATAAATACTGCATTTGCAAACTGTT                                                    >  2:301932/1‑140
                                                                                                 ATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATTAATTTTATGTAATATAAATACTGCATTTGCAAACTGTT                                                    <  2:89170/140‑1
                                                                                                 ATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAAGGTGTGTCTTTTTAAATTAATTTTATATAATATAAATACTGCATTTGCAAACTGTT                                                    >  1:236093/1‑140
                                                                                                   ATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATTAATTTTATGTAATATAAATACTGCATTTGCAAACTGTTGC                                                  <  2:548672/140‑1
                                                                                                     tcATAAAAGATTAGCATGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATTAATTTTATGTAATATAAATACTGCATTTGCAAACTGTTGCAC                                                <  2:169495/138‑1
                                                                                                     CAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACATTATTCAGATTTAACGTGATTAGGGTGTGTCTTTTTAAATTAATTTTATGTAATATAAATACTGCATTTGTAAACTTTTGAAC                                                >  2:167319/1‑140
                                                                                                       ATAAAAGATTAGCTAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATTAATTTTATGTAATATAAATACTGCATTTGCAAACTGTTGCACTT                                              <  1:157950/140‑1
                                                                                                        TAAAAGATTAGCAAGTTAGTTCAAAATTGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATTAATTTTATGTAATATAAATACTGCATTTGCAAACTGTTGCACTTT                                             <  2:352951/140‑1
                                                                                                           AAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATTAATTTTATGTAATATAAATACTGCATTTGCAAACTGTTGCACTTTTAG                                          <  1:468430/140‑1
                                                                                                               TTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATTAATTTTATGTAATATAAATACTGCATTTGCAAACTGTTGCACTTTTAGGTAT                                      <  1:273912/140‑1
                                                                                                                 AGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATTAATTTTATGTAATATAAATACTGCATTTGCAAACTGTTGCACTTTTAGGTATAA                                    <  1:370684/140‑1
                                                                                                                    AAGTTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATTAATTTTATGTAATATAAATACTGCATTTGCAAACTGTTGCCCTTTTAGGTATAACAG                                 <  1:526917/140‑1
                                                                                                                       TTAGTTCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCAACTTTAACGTGATTAGGGTTTGTCTTTTTAAATTAATTTTATGTAATATAAATACTGCATTTGCAAAATGGTGCACTTTTAGGTATAACAGAAT                              >  2:311730/1‑140
                                                                                                                            TCAAAATGGCTATGTATTGTTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATTAATTTTATGTAATATAAATACTGCATTTGCAAACTGTTGCACTTTTAGGTATAACAGAATTAACT                         <  1:167171/140‑1
                                                                                                                            TCAAAATGGCTATGTATTGTCTCTTAAACACACTTTATTCACATTTAACATGATTAGGGTGTGTCTTTTTAAATTAATTTTATGTAATATAAATACTGCATTTGCAAACTGTTGCACTTTTAGGTATAACAGAATTAACT                         <  1:40410/140‑1
                                                                                                                               atATGGCTATGTATTTTTTTTTAGACACACTTTATTCTCATTTCACCTTATTAGTGTTTGTCTTTTTAAATTAATTTTATGTAATATAAATACTGCATTTGCAAACTGTTGCACTTTTAGGTATAACAGAATTAACTACA                      <  1:452001/138‑1
                                                                                                                                     CTATGTATTGTTTTTTAGACACTCTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATTAATTTTATGTAATATAAATACTGCATTTGCAAACTGTTGCACTTTTAGGTATAACAGAATTAACTACATTTAAG                <  2:373114/140‑1
                                                                                                                                            TTGTTTTCTTGACTCATTTTATTCACATTTAACGTGATTAGGTTGTGTCTTTTTAAATTAATTTTATGTAATATAAATACTTCATTTGCAAACTGTTGCACTTTTAGGTATAACAGAATTAACTACATTTAAGGAGATTG         <  2:536506/140‑1
                                                                                                                                               TTTTTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATTAATTTTATGTAATATAAATACTGCATTTGCAAACTGTTGCACTTTTAGGTATAACAGAATTAACTACATTTAAGGAGATTGATG      >  1:376221/1‑140
                                                                                                                                                  TTTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATTAATTTTATGTAATATAAATACTGCATTTGCAAACTGTTGCACTTTTAGGTATAACAGAATTAACTACATTTAAGGAGATTGATGAAC   <  2:100932/140‑1
                                                                                                                                                   TTAGACACACTTTATTCACATTTAACGTGATTCGGGTGTGTCTTTTTAAATTAATTTTATGTAATTTAAATACTGCATTTGCAAACTGTTGCACTTTTAGGTATAACAGAATTAACTACATTTAAGGAGATTGATGAACC  >  1:520679/1‑140
                                                                                                                                                   TTAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATTAATTTTATGTAATATAAATACTGCATTTGCAAACTGTTGCACTTTTAGGTATAACAGAATTAACTACATTTAAGGAGATTGATGAACC  >  1:39071/1‑140
                                                                                                                                                                                                                                                                                               
TAAATAATGGCGATAAAATTTAAGTCATGGGTACATTTAATGTTTTTTGATTCAAACTTCCATTTTGGTCAATTTGCTTTTTTTATAACATAGTTGAATATCAATAAAAGATTAGCAAGTTAGTTCAAAATGGCTATGTATTGTTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP000730/2501039‑2501187
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgtattgttttttAGACACACTTTATTCACATTTAACGTGATTAGGGTGTGTCTTTTTAAATTAATTTTATGTAATATAAATACTGCATTTGCAAACTGTTGCACTTTTAGGTATAACAGAATTAACTACATTTAAGGAGATTGATGAACC  >  CP000730/2504202‑2504339

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.