Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP000730	607,884	0	G	A	59.0%	35.2 / 82.3	80	R209* (CGA→TGA)	dck	deoxynucleoside kinase
Reads supporting (aligned to +/- strand):  ref base G (8/24);  new base A (30/16);  total (39/41)
Fisher's exact test for biased strand distribution p-value = 5.76e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.76e-01
Rejected as consensus: Frequency below/above cutoff threshold.

ATAGTGTATATGTGAATTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTAAATAGCTTTTTCCAGTATTCA  >  CP000730/607741‑608026                                                                                                                                                |                                                                                                                                               atcgtgtattttgtaaTTAATGTATGCGATATAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATTAACATATACGCTATGTCTTTAGTCTTTTATTGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCaa                                                                                                                                           <  2:592420/135‑1 (MQ=255)      gtATATGTGAATTAATGTATTGGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACTCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTg                                                                                                                                      <  2:211766/149‑1 (MQ=255)      gtATATGTGAATTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATTCGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTg                                                                                                                                      <  2:211777/149‑1 (MQ=255)       tataTGTTAATTCATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGt                                                                                                                                     <  2:440838/149‑1 (MQ=255)       tataTGTGAATTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGt                                                                                                                                     <  2:401864/149‑1 (MQ=255)        atatGTGTATTAATGCATTCGATAGAATTGAAAAAAAAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTCTGtt                                                                                                                                    <  2:487660/149‑1 (MQ=255)        atatGTGAATTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGtt                                                                                                                                    >  2:578398/1‑149 (MQ=255)        atatGTGAATTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGc                                                                                                                                             >  1:757431/1‑140 (MQ=255)        atatGTGAATTAATGTATTAGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGAAATGTTTGAATAATTCAAGc                                                                                                                                             >  1:536765/1‑140 (MQ=255)           tgtgAATTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTAt                                                                                                                                 <  2:340864/149‑1 (MQ=255)            gtgAATTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAAtt                                                                                                                                         >  1:145887/1‑140 (MQ=255)                    aTGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTAt                                                                                                                                 >  1:162350/1‑140 (MQ=255)                      gTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTAGATATGTTTGAATCATTCCAGCAATTTTGTTTTTCa                                                                                                                               >  1:454087/1‑140 (MQ=255)                      gTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCCACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCa                                                                                                                               >  1:275182/1‑140 (MQ=255)                        aTTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATa                                                                                                                             >  1:5100/1‑140 (MQ=255)                        aTTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGAATTATTGAGTTTATCTACTTGGCGATAAGTTTAAATACTTCAAGCAATGTTGTTGATtata                                                                                                                             >  1:479475/1‑140 (MQ=255)                          tCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAgg                                                                                                                           <  1:70231/140‑1 (MQ=255)                             aTAGAATTGATAAAGTAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGAtt                                                                                                                        >  1:660074/1‑140 (MQ=255)                             aTAGAATTGATAAAATAATCGATAATATTTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGAtt                                                                                                                        <  1:385977/140‑1 (MQ=255)                             aTAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGAtt                                                                                                                        <  1:72069/140‑1 (MQ=255)                               aGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTa                                                                                                                      <  1:984034/140‑1 (MQ=255)                                 aaTTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCgggg                                                                                                           <  2:157855/149‑1 (MQ=255)                                  aTTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCCTAGGATTTAAAg                                                                                                                   >  1:822875/1‑140 (MQ=255)                                   ttGATAAAATAATCGATAATATTTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGa                                                                                                                  <  1:515094/140‑1 (MQ=255)                                   ttGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGa                                                                                                                  >  1:330434/1‑140 (MQ=255)                                      atatAATAATCAATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTc                                                                                                               <  1:83590/140‑1 (MQ=255)                                      aTAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCtt                                                                                                      <  2:356697/149‑1 (MQ=255)                                      aTAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCtt                                                                                                      >  2:558494/1‑149 (MQ=255)                                      aTAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTc                                                                                                               <  1:782551/140‑1 (MQ=255)                                      aTAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTc                                                                                                               <  1:395988/140‑1 (MQ=255)                                      aTAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCGATGTCTTTAGTCTTTTATCGTGTATCTACTTGTGGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCtt                                                                                                      >  2:83591/1‑149 (MQ=255)                                           ataatCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGt                                                                                                          <  1:546386/140‑1 (MQ=255)                                            aattCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTAGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGat                                                                                                <  2:127448/146‑1 (MQ=255)                                              atCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGGCTTTAGTCTTTTATCGTGTATCTACACGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCt                                                                                                       >  1:26976/1‑140 (MQ=255)                                               tCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTACAACAACCCAAGCAATTTTGTTTCTCATAGGTTTTAAAAATACGGGGTCCtt                                                                                                      >  1:476449/1‑140 (MQ=255)                                               tCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGACCGATTATGGCAAGCAATTTCGTTTATCATAGGCTTTAAAGATTCGGGGTCCtt                                                                                                      >  1:476487/1‑140 (MQ=255)                                                      tgtttATGGAATATACATTGAATATAAACATATACGCTATTTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCa                                                                                      <  2:87101/145‑1 (MQ=255)                                                        tCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCAtt                                                                                    <  2:368130/149‑1 (MQ=255)                                                         cTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTa                                                                                   <  2:102405/149‑1 (MQ=255)                                                         cTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATAAAATTCGTTa                                                                                   <  2:102420/149‑1 (MQ=255)                                                           aTGGAATATACATTGAATATAAACATATACGCTATGTCGTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAATGAATCCAGGTTGTTTTTGATAACata                                                                                          >  1:19342/1‑140 (MQ=255)                                                            tGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAata                                                                                <  2:279735/149‑1 (MQ=255)                                                            tGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAata                                                                                <  2:63399/149‑1 (MQ=255)                                                                    aCATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTTACTAGGGATATCATATTCATTAat                                                                                 <  1:490207/140‑1 (MQ=255)                                                                         gAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACaa                                                                   >  2:174994/1‑149 (MQ=255)                                                                            tataAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAGAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATAc                                                                         >  1:657952/1‑140 (MQ=255)                                                                            tataAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATAc                                                                         >  1:425517/1‑140 (MQ=255)                                                                             ttaAACATATACGACATGTCTGTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTgg                                                               <  2:432008/148‑1 (MQ=255)                                                                             ataAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACg                                                                        >  1:827073/1‑140 (MQ=255)                                                                              taAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGt                                                                       <  1:335110/140‑1 (MQ=255)                                                                               aaaCATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGAc                                                             >  2:25588/1‑149 (MQ=255)                                                                                  cATATACGCTATGTCTTTAGCCTTTTATCGTGTATCCACATGTCGATATGATTGAATAATTCAAGAAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACaa                                                                   >  1:400154/1‑140 (MQ=255)                                                                                   atatACGTTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGc                                                         <  2:518541/149‑1 (MQ=255)                                                                                    tataCGTTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGACACCAGATTCATTAATATTGATACGTACAACt                                                                 <  1:1000294/140‑1 (MQ=255)                                                                                    tataCGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACt                                                                 >  1:159833/1‑140 (MQ=255)                                                                                       aCGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGAGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTa                                                     >  2:348797/1‑149 (MQ=255)                                                                                         gctttttCTTTAGTCTTTTATCGTTTAGCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACa                                                            <  1:490690/134‑1 (MQ=255)                                                                                              ttCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTAt                                              <  2:319014/148‑1 (MQ=255)                                                                                               tCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTAAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATTCGTACAACTTGACATGCAtt                                                      >  1:413434/1‑140 (MQ=255)                                                                                                cTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATATGTATAAATAGACATGCATTa                                                     >  1:850711/1‑140 (MQ=255)                                                                                                cTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTa                                                     >  1:796989/1‑140 (MQ=255)                                                                                                cTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTa                                                     >  1:144350/1‑140 (MQ=255)                                                                                                cTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTa                                                     >  1:385596/1‑140 (MQ=255)                                                                                                 tttatgcTTTTATCGTGTATCTACTTGTCGATATGTTTGAATTATTCGAGTAATTTTGTTTATCATAGGACTTAAACATTCGGGGTTCTTACGTATACCATACTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTACTaa                                           <  2:132751/143‑1 (MQ=255)                                                                                                 tttAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTATTATTGATACGTACAACTGGACATGCATTaa                                                    >  1:738061/1‑140 (MQ=255)                                                                                                 tttAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTGTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTaa                                                    >  1:949818/1‑140 (MQ=255)                                                                                                  ttAGTCTTTTATCGTGTATCCACTAATCGGAAGGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTACAGATTCGCGGTCCTTATGGATATCATATTCATTAATATTAATACATACAACTGGACATGCATTaaa                                                   >  1:488902/1‑140 (MQ=255)                                                                                                      tCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTa                                               >  1:938733/1‑140 (MQ=255)                                                                                                         tttATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTa                                            >  1:303442/1‑140 (MQ=255)                                                                                                         tttACCGTGTATATACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATCTTGATACGTACAACTGGACATAGATTAAAGCTATTa                                            >  1:712313/1‑140 (MQ=255)                                                                                                                  tATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGt                          <  2:511617/149‑1 (MQ=255)                                                                                                                  tATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGGCCTTATGGATTTCATCTTCATTAATATTGATACGTACAACTGGACATGCATTAGAGGTATTCATCCAATCGTCATAGCGt                          >  2:488987/1‑149 (MQ=255)                                                                                                                   ttCTACTTGTCGATATGTTTGAATAATTTCAGACATTTTGTTTCTCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAAGATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGt                                  <  1:524564/139‑1 (MQ=255)                                                                                                                    tCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTc                                 <  1:318587/140‑1 (MQ=255)                                                                                                                     ttACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTa                       <  2:77180/148‑1 (MQ=255)                                                                                                                     cTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTa                       <  2:120084/149‑1 (MQ=255)                                                                                                                             cGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTACTCCAAGAGTCATAGCGTTTaactgtctt               >  2:360827/1‑142 (MQ=255)                                                                                                                                   gTTTGAATAATTTAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTAAATAg                  <  1:135342/140‑1 (MQ=255)                                                                                                                                   gTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAGTCGTCATAGCGTTTAAATAg                  <  1:633535/140‑1 (MQ=255)                                                                                                                                          taatTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTAAATAGCTTTTTCCAGTATTCa  <  2:472558/149‑1 (MQ=255)                                                                                                                                                |                                                                                                                                               ATAGTGTATATGTGAATTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTAAATAGCTTTTTCCAGTATTCA  >  CP000730/607741‑608026

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑