Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007301,064,4440A.63.1% 63.1 / 107.6 65coding (45/1218 nt)brpALytR family transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base A (9/15);  new base . (23/18);  total (32/33)
Fisher's exact test for biased strand distribution p-value = 2.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

AGATAGGTTGTTCTTCGGGATTGACTTTATTATCTCTTAAGTTGGATTGACGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAGAACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATTAAATTTTTGTTAAATCATAATCATAATTTTAAAATATAATTAGTTGAACGATATTTATACAACTTCATTACTAATACATTATAG  >  CP000730/1064302‑1064590
                                                                                                                                              |                                                                                                                                                  
agaTAGGTTGTTCTTCGGGATTGACTTTATTATCTCTTAAGTTGGATTGACGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAGAACCAAt                                                                                                                                              >  2:597497/1‑149 (MQ=255)
   tAGGTTGTTCTTCGGGATTGACTTTATTATCTCTTAAGTTGGATTGACGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATgaga                                                                                                                                                    >  1:565476/1‑140 (MQ=255)
     ggTTGTTCTTCGGGATTGACTTTATTATCTCTTAAGTTGGATTGACGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAGAACCAATGCTAg                                                                                                                                         >  2:74896/1‑149 (MQ=255)
        tgttCTTCGGGATTGACTTTATTATCTCTTAAGTTGGATTGACGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACACCAATGAG‑ACCAAt                                                                                                                                              >  1:28996/1‑140 (MQ=255)
        tgttCTTCGGGATTGACTTTATTATCTCTTAAGTTGGATTGACGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAG‑ACCAAt                                                                                                                                              <  1:435832/140‑1 (MQ=255)
          ttcttcGGGATTGACTTTATTATCTCTTAAGTTGGATTGACGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGAAACAACAATGAG‑ACCAATGc                                                                                                                                            >  1:784851/1‑140 (MQ=255)
            cttcGGGATTGACTTTATTATCTCTTAAGTTGGATTGACGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTa                                                                                                                                          >  1:164401/1‑140 (MQ=255)
                 ggATTGACTTTATTATCTCTTAAGTTGGATTGACGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAGAACCAATGCTAGAAGGATCaaaaa                                                                                                                             >  2:50942/1‑149 (MQ=255)
                 ggATTGACTTTATTATCTCTTAAGTTGGATTGACGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAGAACCAATGCTAGAAGGATCaaaaa                                                                                                                             <  2:57583/149‑1 (MQ=255)
                  gATTGCCTTTATTATCTCTTAAGTTGGATTGACGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGa                                                                                                                                    <  1:819546/140‑1 (MQ=255)
                     tGACTTTATTATCTCTTAAGTTGGATTGACGATTAGCATTTTTGCGGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGCTCa                                                                                                                                 >  1:195614/1‑140 (MQ=255)
                      gACTTTATTATCTCTTAAGTTGGATTGACGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGCCTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGATCaa                                                                                                                                >  1:169197/1‑140 (MQ=255)
                      gACTTTATTATCTCTTAAGTTGGATTGACGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGATCaa                                                                                                                                >  1:146400/1‑140 (MQ=255)
                      gACTTTATTATCTCTTAAGTTGGATTGACGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGATCaa                                                                                                                                >  1:318771/1‑140 (MQ=255)
                      gACTTTATTATCTCTTAAGTTGGATTGACGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGATCaa                                                                                                                                >  1:906658/1‑140 (MQ=255)
                       aCTTTATTATCTCTTAAGTTGGATTGACGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAGAACCAATGCTAGAAGGATCAAAAAGTAttt                                                                                                                       >  2:83046/1‑149 (MQ=255)
                            attatCTCTTAAGTTGGATTGACGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAGAACCAATGAAAAAAAAAAAAAAAAGTATTTTaaaa                                                                                                                  <  2:318914/149‑1 (MQ=255)
                               atCTCTTAAGTTGGATTGACGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGATCAAAAAGTAttt                                                                                                                       <  1:14424/140‑1 (MQ=255)
                                       agtagaatcgACGATTAGCATTTTTGCCGTCTTGAGAAGATTCGAATTCATCCTGGGACGTTTTAAAAAATAACGTAGAGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGCTCAAAAAGTATTTTAAAAAtt                                                                                                               <  1:622152/131‑1 (MQ=255)
                                       aGTTGGATTGACGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAGAACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCa                                                                                                         >  2:154211/1‑147 (MQ=255)
                                        gTTGGATTGACGATTAGCATTTTTTCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAAttt                                                                                                              >  1:898273/1‑140 (MQ=255)
                                        gTTGGATTGACGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAGAACCAATACTAGAAGGATCAAAACGTATTTTAAAAATTTATTCAtga                                                                                                      >  2:228516/1‑149 (MQ=255)
                                             aTTGACGATACGCATTTTTGCTGTGTTGAGAAGATTCGAATGCATCTTGGGCTGGTTGAAAAAGTAACGTAACTAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCa                                                                                                         >  1:738904/1‑140 (MQ=255)
                                                 aCGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAGAACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTc                                                                                             <  2:527762/149‑1 (MQ=255)
                                                 aCGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCAtgat                                                                                                     <  1:779930/140‑1 (MQ=255)
                                                 aCGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCAtgat                                                                                                     <  1:646325/140‑1 (MQ=255)
                                                 aCGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCAtgat                                                                                                     <  1:114286/140‑1 (MQ=255)
                                                  cGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGATCCAACAGGCTTTTAAAAATTTATTCAtgatt                                                                                                    >  1:936553/1‑140 (MQ=255)
                                                  cGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCAtgatt                                                                                                    <  1:845102/140‑1 (MQ=255)
                                                  cGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATGCAtgatt                                                                                                    >  1:511992/1‑140 (MQ=255)
                                                    gttAGCATTTTTCCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAGAACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCta                                                                                          <  2:110130/148‑1 (MQ=255)
                                                    aTTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCAtgattga                                                                                                  <  1:458375/140‑1 (MQ=255)
                                                      tAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAG‑ACCCATGCTCGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTAATg                                                                                                >  1:681446/1‑140 (MQ=255)
                                                      tAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATg                                                                                                <  1:604993/140‑1 (MQ=255)
                                                          aTTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTcc                                                                                            >  1:215669/1‑140 (MQ=255)
                                                               tGCAGTCTTGAGAAGATTCGAATGCATCTGGGTACGTTTTAAAAATTAACGTAGCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTatat                                                                                       <  1:345386/140‑1 (MQ=255)
                                                                 cTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTGTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAGAACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATGAAATTTTTg                                                                             >  2:276384/1‑149 (MQ=255)
                                                                 cTGTCTTGAGAAGATTCGAATACATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATTa                                                                                     >  1:524595/1‑140 (MQ=255)
                                                                      ttGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATTAAAttt                                                                                <  1:136955/140‑1 (MQ=255)
                                                                      ttGAGAAGAGTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGNATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATTAAAttt                                                                                <  1:679031/140‑1 (MQ=255)
                                                                       tGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAGAACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATTAAATTTTTGTTAaat                                                                       <  2:353704/149‑1 (MQ=255)
                                                                          gaagaTTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAGAACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATTAAATTTTTGTTAaatcat                                                                    <  2:370963/149‑1 (MQ=255)
                                                                             gaTTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAGAACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATTAAATTTTTGTTAaatcataat                                                                 <  2:338265/149‑1 (MQ=255)
                                                                               ttCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAGAACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATTAAATTTTTGTTAaatcataatca                                                               <  2:239498/149‑1 (MQ=255)
                                                                               ttCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAGAACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATTAAATTTTTGTTAaatcataatca                                                               <  2:194284/149‑1 (MQ=255)
                                                                                tCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTAATGCTCCTATATTAAATTTTTGTTAaatc                                                                      >  1:40863/1‑140 (MQ=255)
                                                                                        aTCATGGGACGTTTTAGAAAGTAACGTAGCGAAAACTAGTGGAACAACAATGAGAACCAATGCTAGAAGGATCAAAAATTATTTTAAAAATTTATTCATGATTGATGCTCCTATAATAACTTTTTGTTAAATCATAATCATAATTTTaa                                                      <  2:202950/149‑1 (MQ=255)
                                                                                         tCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATTAAATTTTTGTTAAatcataatcata                                                             <  1:636966/140‑1 (MQ=255)
                                                                                                     ttAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAGAACCGATGCTAGAAGGATCAAAAGGTATTTTAAAAAGTTATTCATGATTGATGCTCCTAGATTAGATTTTTGTGAAATCATAATATTAAGTTTAAAAAGTAATTAttt                                         >  2:529740/1‑149 (MQ=255)
                                                                                                              agcGTAGCGAAGACTATTGGAACAACAATGAGAACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATTAAATTTTTGTTAAATCATAATCATAATTTTAAAATATAATTAGTTGAACGatat                                <  2:180498/147‑1 (MQ=255)
                                                                                                                 gTAGCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATTAAATTTTTGTTAAATCATAATCATAATTTTAAAATATAATTAGTTGAAc                                     >  1:115382/1‑140 (MQ=255)
                                                                                                                  tAGCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATTAAATTTTTGTTAAATCATAATCATAATTTTAAAATATAATTAGTTGAACg                                    <  1:865891/140‑1 (MQ=255)
                                                                                                                    gCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATTAAATTTTTGTTAAATCATAATCATAATTTTAAAATATAATTAGTTGAACGat                                  >  1:362286/1‑140 (MQ=255)
                                                                                                                    gCGAAGACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATTAAATTTTTGTTAAATCATAATCATAATTTTAAAATATAATTAGTTGAACGat                                  >  1:362159/1‑140 (MQ=255)
                                                                                                                      gAAGACTATTGGAACAACAATGAGAACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATTAAATTTTTGTTAAATCATAATCATAATTTTAAAATATAATTAGTTGAACGATATTTATACaa                        <  2:196016/149‑1 (MQ=255)
                                                                                                                         gACTATTGGAACAACAATGAG‑ACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATTAAATTTTTGTTAAATCATAATCATAATTTTAAAATATAATTAGTTGAACGATATTta                             <  1:431369/140‑1 (MQ=255)
                                                                                                                          aCTATTGGAACAACAATGAGAACCAATGCTAGACGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATTAAATTTTTGTTAAATCATAATCATAATTTTAAAATATAATTAGTTGAACGATATTTATACAACTTc                    <  2:334291/149‑1 (MQ=255)
                                                                                                                               tGGAACAACAATGAGAACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATTCTCCTATATTAAATTTTTGTTAAATCATAATCATAATTTTAAAATATAATTAGTTGAACGATATTTATACAACTTCATTAc               >  2:269386/1‑149 (MQ=255)
                                                                                                                                ggAACAACAATGAG‑ACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATTAAATTTTTGTTAAATCATAATCATAATTTTAAAATATAATTAGTTGAACGATATTTATACAACt                      >  1:1004484/1‑140 (MQ=255)
                                                                                                                                  aacaacAATGAGAACCAATGCTAGAAGGATCAAAAAGTATTTTAAACATTTATTCATGATTGATGCTCCTATATTAAATTTTTGTTAAATCATAATCATAATTTTAAAATATAATGAGTTGAACGATATTTATACAACTTCATTACTaa            <  2:496506/149‑1 (MQ=255)
                                                                                                                                        aaTGAGAACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATTAAATTTTTGTTAAATCATAATCATAATTTTAAAATATAATTAGTTGAACGATATTTATACAACTTCATTACTAATACAtt      <  2:378819/149‑1 (MQ=255)
                                                                                                                                        aaTGAG‑ACCAATGCTAGAAGGATCTAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATTAAATTTTTGTTAAATCATAATCATAATTTTAAAATATAATTAGTTGAACGATATTTATACAACTTCATTACt              >  1:643038/1‑140 (MQ=255)
                                                                                                                                        aaTGAG‑ACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATTAAATTTTTGTTAAATCATAATCATAATTTTAAAATATAATTAGTTGAACGATATTTATACAACTTCATTACt              >  1:790836/1‑140 (MQ=255)
                                                                                                                                         aTGAG‑ACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATTAAATTTTTGTTAAATCATAATCATAATTTTAAAATATAATTAGTTGAACGATATTTATACAACTTCATTACTa             >  1:313126/1‑140 (MQ=255)
                                                                                                                                         aTGAG‑ACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATTAAATTTTTGTTAAATCATAATCATAATTTTAAAATATAATTAGTTGAACGATATTTATACAACTTCATTACTa             <  1:541958/140‑1 (MQ=255)
                                                                                                                                         aTGAG‑ACCAAAGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATTAAATTTTTGTTAAATCATAATCATAATTTTAAAATATAATTAGTTGAACGATATTTATACAACTTCATTACTa             <  1:168168/140‑1 (MQ=255)
                                                                                                                                            agaACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTTATGCTCCTATATTAAATTTTTGTTAAATCATAATCATAATTTTAAAATATAATTAGTTGAACGATATTTATACAACTTCATTACTAATACATTATAg  >  2:595308/1‑149 (MQ=255)
                                                                                                                                              |                                                                                                                                                  
AGATAGGTTGTTCTTCGGGATTGACTTTATTATCTCTTAAGTTGGATTGACGATTAGCATTTTTGCTGTCTTGAGAAGATTCGAATGCATCTTGGGACGTTTTAAAAAGTAACGTAGCGAAGACTATTGGAACAACAATGAGAACCAATGCTAGAAGGATCAAAAAGTATTTTAAAAATTTATTCATGATTGATGCTCCTATATTAAATTTTTGTTAAATCATAATCATAATTTTAAAATATAATTAGTTGAACGATATTTATACAACTTCATTACTAATACATTATAG  >  CP000730/1064302‑1064590

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑