New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 512620 =61 (0.950)54 (1.220)
+TTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAA
45/180 NT 56.2% intergenic (+688/‑173) recR/rrs1 recombination protein RecR/16S ribosomal RNA
?CP000730 1998278 = NA (NA)intergenic (‑6/+5) USA300HOU_t0050/rrf4 tRNA‑Val/5S ribosomal RNA

Only 100 of 113 total aligned reads displayed.

TACTAAATAATGTTTGTAACTTATAGTTACGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATTAACATTTAAGTCAATAACTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/512758‑512620
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGCTATAGTCACCAGACATATGAATGTAATTT  >  CP000730/1998278‑1998414
                                                                                                                                           |||||||||||||||||||||||||||||||||||||||||                                                                                                                                         
 ACTAAATAATGTTTGTAACTTATAGTTACGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTA                                                                                                                                                                                 >  2:316102/1‑141
  CTAAATAATGTTTTTAACTTATAGTTACGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTAT                                                                                                                                                                                <  2:239265/141‑1
   TAAATAATGTTTGTAACTTATAGTTACGTTTTTTTTTTTTTTTGTTGACATATTGTCAGTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATCACTTTTTTTATt                                                                                                                                                                               >  2:664927/1‑140
   TAAATAATGTTTGTAACTTATAGTTACGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATC                                                                                                                                                                               >  1:759096/1‑141
   TAAATAATGTTTGTAACTTATAGTTACGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATC                                                                                                                                                                               <  2:153104/141‑1
     AATAATGTTTGTAACTTATAGTTACGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTT                                                                                                                                                                             <  1:657690/141‑1
      ATAATGTTTGTAACTTATAGTTACGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTG                                                                                                                                                                            >  1:577816/1‑141
         ATGTTTGTAACTTATAGTTACGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTTTCC                                                                                                                                                                         >  2:152539/1‑141
              TGTAACTTATAGTTACGTTTTTTGGATTTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTT                                                                                                                                                                    <  2:660125/141‑1
              TGTAACTTATAGTTACGTTTTTTGGAATTAACGTTGACATATTGTCCTTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTT                                                                                                                                                                    >  1:679742/1‑141
              TGTAACTAATAGTTACGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTT                                                                                                                                                                    >  1:483632/1‑141
                tattgTATTGTTATGTTTTTTTGACTTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAATAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTAT                                                                                                                                                                  <  2:404478/136‑1
                      ATAGTTACGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTA                                                                                                                                                            >  1:137333/1‑141
                           TACGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGGTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAGTAACTTTTTTTATCTTTTCCATTTTATTTTTTctcaaa                                                                                                                                                       >  2:586795/1‑135
                             CGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAA                                                                                                                                                    <  2:659376/141‑1
                                   TTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGAT                                                                                                                                              >  1:223017/1‑141
                                      cAATTAACCTTGACATATTTTCATTCAGTTTTCAATGTTCATTTTTCTTCCCGACAATAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCTAAATTTGATTAA                                                                                                                                           <  1:374115/140‑1
                                           AACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAtc                                                                                                                                      >  2:524958/1‑139
                                           AACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTGGATTAAAAAAt                                                                                                                                      >  2:152385/1‑140
                                            ACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACT                                                                                                                                     >  2:690421/1‑141
                                                TGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCT                                                                                                                                 >  2:548786/1‑141
                                                TGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCAATTGTATTTTTTAACCAAAATTTGATTAAAAAACTGCCT                                                                                                                                 >  1:590877/1‑141
                                                 tACATCTTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTG                                                                                                                                <  1:433284/140‑1
                                                 GACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTG                                                                                                                                <  1:619359/141‑1
                                                        TGTCATTCAGTTTTCAATGGCAATGTTTCTTATCGCCAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTACCCAAAATTTGATTAAAAAACTGCCTGGCAACGT                                                                                                                         <  2:726575/141‑1
                                                         GTCATTAAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTT                                                                                                                        <  2:65515/141‑1
                                                              TCATTTTTCAATGTTCATTTTTCTTACCGACAACAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACT                                                                                                                   <  2:519840/141‑1
                                                                   TTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATTTTTTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTTGCAACGTTCTACTCTAGC                                                                                                              >  2:406181/1‑141
                                                                    TTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCG                                                                                                             <  1:370901/141‑1
                                                                      CAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTATCGGA                                                                                                           >  1:36004/1‑141
                                                                       AATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGca                                                                                                          >  2:436416/1‑139
                                                                        agGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAACATCAGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAAC                                                                                                         <  1:486622/139‑1
                                                                         TGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACG                                                                                                        <  1:504545/141‑1
                                                                          GTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGT                                                                                                       >  1:629510/1‑141
                                                                            TCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTTTTTTTTCTATTTTATTTTTTAACCAAAATTTGTTTAAAATACTGCCTGGCAACGTTCTACTCTAGCGGACCGTAt                                                                                                     >  2:726779/1‑140
                                                                              ctcttcCTTACCGACAAGAATTAATTATTCATTTTATCATCATTTAAGTCAATAACTTTTTTTATCTGGTCCATTTTATTTTTTAACCAAAATTTGATTAAAGAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGT                                                                                                   <  2:595437/135‑1
                                                                                TTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGTCAACGTTCTACTATAGCGGAACGTAAGTTC                                                                                                 >  2:737056/1‑141
                                                                                TTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTC                                                                                                 >  1:200039/1‑141
                                                                                   TCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCTAAATTTGATTAAAAAACTGCCTGTCAACGTTCTACTTTACCGAAACGTCAGTTCGAC                                                                                              >  2:673061/1‑141
                                                                                   TCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGAC                                                                                              >  1:724499/1‑141
                                                                                    CTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACT                                                                                             >  1:534432/1‑141
                                                                                    CTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACT                                                                                             <  1:763677/141‑1
                                                                                    CTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACT                                                                                             >  2:549426/1‑141
                                                                                      TACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTAC                                                                                           <  1:91932/141‑1
                                                                                            CAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGTCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGA                                                                                     <  1:152539/141‑1
                                                                                            CAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGA                                                                                     >  1:89369/1‑141
                                                                                               GAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGTGGAACGTAAGTTCGACTACCATCGACGC                                                                                  <  2:290711/141‑1
                                                                                               GAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGC                                                                                  <  2:653067/141‑1
                                                                                                 ATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTA                                                                                >  2:54529/1‑141
                                                                                                  TTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTACTGTTTATTTTTTGACCAAAATTTGATTAGAAAACTGCCTGGCAATGTTCTACTCTAGCGGAGCGTAAGTTAGAATACCAATGACACTAA                                                                               >  2:299190/1‑141
                                                                                                   TAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAG                                                                              >  1:355066/1‑141
                                                                                                             TTTTATCAACATTTAAGTCAATAACTTTTTTTAGCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGGGCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACT                                                                    <  1:345689/141‑1
                                                                                                              TTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTT                                                                   >  1:397580/1‑141
                                                                                                               TTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTC                                                                  <  1:264537/141‑1
                                                                                                                tatcAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCAACTACCATCGACGCTAAGGAGCTTAACTTCT                                                                 >  1:748911/5‑141
                                                                                                                taccAACATTGCAGTCAGTGCCCTTTTTTATCGTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCT                                                                 <  1:689721/137‑1
                                                                                                                    AACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACGCTAGCGGAACGTAAGTTCGACTCCCATCGACGCTAAGGAGCTTAACTTCTGTGT                                                             <  2:207971/141‑1
                                                                                                                      CATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTC                                                           <  1:575314/141‑1
                                                                                                                        atcAAGTCAATAACTTTTTTTACCTGTTCCATTCTATTTTTAAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGG                                                         <  1:141774/138‑1
                                                                                                                           AAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCAT                                                      <  2:89369/141‑1
                                                                                                                            AGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGAGGAAGGTAAGTTCGACTACCATCGAGGCTAAGGAGCTTAACTTCTGGTTTCGGCAgg                                                     >  1:102471/1‑139
                                                                                                                             GTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGG                                                    <  2:576226/141‑1
                                                                                                                             GTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCAGGG                                                    >  1:356561/1‑141
                                                                                                                                  TAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAAATTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCTACTACCATCGACGCTAAGGAGCTTTACTTCTTTGGTCTGCATGGGAtcg                                               >  2:441063/1‑138
                                                                                                                                   AACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAG                                              <  2:657629/141‑1
                                                                                                                                    ACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGG                                             <  1:9001/141‑1
                                                                                                                                     CTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACGGGT                                            <  2:200039/141‑1
                                                                                                                                       TTTTTTATCCTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGT                                          >  1:561751/1‑141
                                                                                                                                       TTTTTTAACTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGT                                          >  1:30402/1‑141
                                                                                                                                        TTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTG                                         <  2:616618/141‑1
                                                                                                                                         TTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGA                                        <  2:137333/141‑1
                                                                                                                                         TTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGA                                        <  2:724499/141‑1
                                                                                                                                          TTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGAC                                       <  1:669901/141‑1
                                                                                                                                          TTTATCTTGTCCATTTTATTTTTTAACCAAAAATTGATTAAAAAACTGCCTGGCAGCGTTCTACTCTAGCGGAACGTAAGTTCGCCTACCATCGACTCTAAGGCGCTTAACTGCTGTGTTCGCCATGGGAACAGGTTTGcc                                       >  2:12507/1‑139
                                                                                                                                           TTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACC                                      <  2:577816/141‑1
                                                                                                                                             ATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAACCTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGTTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTC                                    <  1:119261/141‑1
                                                                                                                                             ATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCAACGCGACGGAGCTTAACTTCTGTGTTTGTCATGGCAAAAGGTGTGACCct                                    >  2:678534/1‑139
                                                                                                                                             ATCTTGTCCATTTTATTTTTTAACAAAAGTTTGATTAAGAAACTGCGTGGCAACGTGCTACTCTAGCGGAACGTAAGTTCGACTACCATAGACGCTAAGGAGCTTAACTTGTGTGTTGGGAATGGGAGCAGAGGTGAgcac                                    >  2:485052/1‑137
                                                                                                                                                  GTCCATTTTATTTTTTAACCAAAATTTGATTAAAAACCTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGC                               <  1:336346/141‑1
                                                                                                                                                  GTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGC                               <  2:246080/141‑1
                                                                                                                                                     tATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGCTAT                            <  2:15238/140‑1
                                                                                                                                                       ttgTATTCTTTAGCCAAAAGTTGATTAAACAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGCCCTCCTTGCTATAG                          <  1:586795/138‑1
                                                                                                                                                          TATTTTGTAACCAAAATTTGATTAAAACACTGCCTGACAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGCTATAGTCA                       <  1:45265/141‑1
                                                                                                                                                           ATTTTTTAACCAAACATTTCATTTTATACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCAGTGTTCGGCATGGGAAACGATGTGACCTCCTGGCTATAGACAC                      >  2:545025/1‑141
                                                                                                                                                            TTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGCTATAGTCACC                     >  1:59581/1‑141
                                                                                                                                                                TTAACCAAAATTGTATTAAAAACCTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGCGTGACCTCCTTGCTATAGTCACCAGAC                 <  2:416687/141‑1
                                                                                                                                                                 TAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGCTATAGTCACCAGACA                <  2:140711/141‑1
                                                                                                                                                                 TAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGCTATAGTCACCAGACA                <  2:275648/141‑1
                                                                                                                                                                 TAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGCAAGTTCGCCTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAAGAGGTGTGACCTCCTTGCGATAGTCACCAGACA                >  1:514421/1‑141
                                                                                                                                                                    CCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGCTATAGTCACCAGACATAT             >  1:749716/1‑141
                                                                                                                                                                       AAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGCTATAGTCACCAGACATATGAA          <  2:588758/141‑1
                                                                                                                                                                       AAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGCTATAGTCACCAGACATATGAA          <  1:54529/141‑1
                                                                                                                                                                       AAATGTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCTGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGCTATAGTCACCAGACATATGAA          <  2:679742/141‑1
                                                                                                                                                                             TGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGAAGCTAAGGCGGTAAAGTGCTGTTTTCGGTATGGGAACAGGGGTGACCTCCTTGCTATAGTCACCAGACATATGAATGTAA     >  2:654493/1‑141
                                                                                                                                                                               ATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAATATAGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTTCTATAGTCACCAGACATAGGAATGTAATT   >  2:697624/1‑141
                                                                                                                                                                               ATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTTCTATAGTCACCAAACATATGAATGTAATT   >  1:357588/1‑141
                                                                                                                                                                               ATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGCTATAGTCACCAGACATATGAATGTAATT   >  2:559468/1‑141
                                                                                                                                                                                TTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGCTATAGTCACCAGACATATGAATGTAATTT  >  2:431094/1‑141
                                                                                                                                                                                TTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGCTATAGTCACCAGACATATGAATGTAATTT  >  1:558293/1‑141
                                                                                                                                                                                TTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGCTATAGTCACCAGACATATGAATGTAATTT  >  2:431214/1‑141
                                                                                                                                           |||||||||||||||||||||||||||||||||||||||||                                                                                                                                         
TACTAAATAATGTTTGTAACTTATAGTTACGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATTAACATTTAAGTCAATAACTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/512758‑512620
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGCTATAGTCACCAGACATATGAATGTAATTT  >  CP000730/1998278‑1998414

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.