Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 873,632 A→T 6.0% S179S (TCA→TCT clfA → fibrinogen‑binding protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP000730873,6320AT 6.0% 205.6 / 2.2 68S179S (TCA→TCTclfAfibrinogen‑binding protein
Reads supporting (aligned to +/- strand):  ref base A (31/31);  new base T (2/2);  total (34/34)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.32e-01

CAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTCTAATGATACTAATACAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACAAGTGCGCCTAGAATGAGAGCATTTAGTTTAGCGGCAGTAGCTGCAGATGCAC  >  CP000730/873493‑873771
                                                                                                                                           |                                                                                                                                           
caaGCAATACAAATGCGGAGGAATTAGTGAATCAAAGAAAATAGGAAACGACTTCTAATGATACTAATACAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCaa                                                                                                                                            <  1:590545/141‑1 (MQ=255)
caaGCAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTCTAATGATACTAATACAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCaa                                                                                                                                            <  1:121786/141‑1 (MQ=255)
caaGCAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTCTAATGATACTAATACAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCaa                                                                                                                                            <  2:488080/141‑1 (MQ=255)
            aTGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTCTAATGATACTAATACAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAacac                                                                                                                                <  1:690905/141‑1 (MQ=255)
              gCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTCTAATGATACTAATACAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCt                                                                                                                              <  1:732452/141‑1 (MQ=255)
              gCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTCTAATGATACTAATACAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCt                                                                                                                              <  1:761368/141‑1 (MQ=255)
                  aggaATTAGGGAATCAAACAAGTAATGAAACGACTTCTAATGATACTAATACAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATTCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCaa                                                                                                                          <  2:312435/141‑1 (MQ=255)
                   ggaATTAGTGAATCAAACAAGTAATGAAACGACTTCTAATGATACTAATACAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCaaa                                                                                                                         <  1:628896/141‑1 (MQ=255)
                      aTTAGTGAATCAAACAAGTAATGAAACGACTTCTAATGATACTAATACAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACaa                                                                                                                      >  2:417100/1‑141 (MQ=255)
                         aGTGAATCAAACAAGTAATGAAACGACTTCTAATGATACTAATACAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGa                                                                                                                   <  1:296817/141‑1 (MQ=255)
                          ttGAATCAAACAAGTAATGAAACGACTTCTAATGATACTAATACAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGaa                                                                                                                  <  1:136779/140‑1 (MQ=255)
                          gTGAATCAAACAAGTAATGAAACGACTTCTAATGATACTAATACAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACTCCTTCAAACAAGGaa                                                                                                                  <  2:761685/141‑1 (MQ=255)
                          gTGAATCAAACAAGTAATGAAACGACTTCTAATGATACTAATACAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGaa                                                                                                                  >  2:433424/1‑141 (MQ=255)
                                   aCAAGTAATGAAACGACTTCTAATGATACTAATACAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAAAACCTTCAAACAATGAATCAGCTccc                                                                                                         >  2:476702/1‑140 (MQ=255)
                                   aCAAGTAATGAAACGACTGCTAATGATACTAATACAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCca                                                                                                         <  2:406285/141‑1 (MQ=255)
                                      aGTAATGAAACGACTTCTAATGATACTAATACAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATTTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACag                                                                                                      <  1:601574/141‑1 (MQ=255)
                                        aaaTTAAACGCCTTCTAATGAAACTAATACAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGGTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACagag                                                                                                    <  1:204818/140‑1 (MQ=255)
                                        aaaTGAGACGACTTCTAATGACACTAATACAGTATCACCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATTTTTCTTAAATTAAAGTTACTACCGTTGTATCAACACCTTCAAACAATGAATCAGCTCCACagag                                                                                                    <  1:181371/140‑1 (MQ=255)
                                          acgAAACGACTTCTAATGATACTAATACAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTa                                                                                                  <  2:415472/139‑1 (MQ=255)
                                          aTGAAACGACTTCTAATGATACTAATACAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTa                                                                                                  <  1:27316/141‑1 (MQ=255)
                                                 gACTTCTAATGATACTAATACAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGGACAGATGc                                                                                           >  1:45692/1‑141 (MQ=255)
                                                 caCTTCTAATGATACTACTACAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGc                                                                                           <  2:389545/140‑1 (MQ=255)
                                                  aCTTCTAATGACACTAATACATTATCATCTGTAAATTCACCGCAAAATTCTACAAAGGCGGAAAAGGTTTCAACAACGCAAGATACGTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCa                                                                                          <  1:157001/141‑1 (MQ=255)
                                                      cTAATGATACTAATACAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCacgaa                                                                                      >  1:274385/1‑137 (MQ=255)
                                                             tACTAATACAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGa                                                                               >  1:116560/1‑141 (MQ=255)
                                                             tACTAATACAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGGACAGATGCAAATAATAAAGa                                                                               >  1:489433/1‑141 (MQ=255)
                                                                 taTACAGGATCATCAGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTa                                                                           <  2:724712/140‑1 (MQ=255)
                                                                   tACAGTATCATCTGTAAATTCACCTCAAAATCCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGt                                                                         <  2:699291/141‑1 (MQ=255)
                                                                    ataGTCTCAACTGTCACTACACCCCAAAGTTCTACAAATGCGTAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGtt                                                                        <  2:148557/139‑1 (MQ=255)
                                                                    aCAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGtt                                                                        >  1:37435/1‑141 (MQ=255)
                                                                     cAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTa                                                                       >  1:66989/1‑141 (MQ=255)
                                                                      aGTAGCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTaa                                                                      <  2:98541/141‑1 (MQ=255)
                                                                          tcatcTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCTACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCaa                                                                  >  2:332742/1‑141 (MQ=255)
                                                                          tcatcTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCTACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCaa                                                                  >  2:117771/1‑141 (MQ=255)
                                                                           catcTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAg                                                                 >  2:113667/1‑141 (MQ=255)
                                                                              cTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCAACAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCgg                                                              >  2:145132/1‑141 (MQ=255)
                                                                               tGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGt                                                             >  1:616330/1‑141 (MQ=255)
                                                                                 tAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTa                                                           >  1:583834/1‑141 (MQ=255)
                                                                                   aaTTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATAAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAAt                                                         >  2:539760/1‑141 (MQ=255)
                                                                                   aaTTCACCTCAAAATTCAACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACGGCAGCAACACCTTCAAACAAGGAAACAGCCCCACAGAGTACAGATGCAAGCAATAAAGATGTAGTCAATCAAGCGGTTaaa                                                         >  1:197946/1‑140 (MQ=255)
                                                                                    aTTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATa                                                        >  2:403596/1‑141 (MQ=255)
                                                                                     ttCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATAc                                                       >  2:524756/1‑141 (MQ=255)
                                                                                      tCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACa                                                      >  2:71514/1‑141 (MQ=255)
                                                                                             aaaaTTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATTGTCCGACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAATTAATCAAGAGGTTAATCCAAGTccgc                                               >  1:338086/1‑141 (MQ=255)
                                                                                             aaaaTTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACAAGTgcgc                                               <  1:414726/141‑1 (MQ=255)
                                                                                               aaTTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACAAGTGCGCCt                                             <  1:248321/141‑1 (MQ=255)
                                                                                                    tACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACAAGTGCGCCTAGCAt                                        >  2:744900/1‑141 (MQ=255)
                                                                                                      cAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCCAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACAACTGCGCCTAGGATga                                      >  2:36373/1‑141 (MQ=255)
                                                                                                      aaaaTGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACAAGTGCGCCTAGAATga                                      <  1:493117/140‑1 (MQ=255)
                                                                                                        aaTGCGGAAAATGTCTCAACAACGCAAGATACTCCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACAAGTGCGCCTAGAATgaga                                    <  2:301980/141‑1 (MQ=255)
                                                                                                         aTGCGGAGAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGCCTAATACAAGTGCGCCTAGAATGagag                                   <  2:737278/141‑1 (MQ=255)
                                                                                                         aTGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACAAGTGCGCCTAGAATGagag                                   <  2:116560/141‑1 (MQ=255)
                                                                                                             ggAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACAAGTGCGCCTAGAATGAGAGCAtt                               >  2:260314/1‑141 (MQ=255)
                                                                                                                 aaTGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACAAGTGCGCCTAGAATGAGAGCAtttagt                           <  2:582416/141‑1 (MQ=255)
                                                                                                                     tttCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACAAGTGCGCCTAGAATGAGAGCAtttagtttag                       <  1:305262/141‑1 (MQ=255)
                                                                                                                     tttCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACAAGTGCGCCTAGAATGAGAGCAtttagtttag                       >  2:245875/1‑141 (MQ=255)
                                                                                                                     tttCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGAGGTAGTTAATCAAGCGGTTAATACAAGTGCGCCTAGAATGAGAGCAtttagtttag                       <  1:323830/141‑1 (MQ=255)
                                                                                                                      ttCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACAAGTGCGCCTAGAATGAGAGCATTTAGTTTAGc                      <  1:286339/141‑1 (MQ=255)
                                                                                                                      ttCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGATCAACAGAGTACAGATGCAAGTAATAAAGGTGTAGTTAATCAAGCGGTTAATGAAAGTACGCCTAGAATGAGAGCAtttagtttagg                      >  2:302793/1‑140 (MQ=255)
                                                                                                                              cGCAAGATACTTCTACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACAAGTGCGCCTAGAATGAGAGCATTTAGTTTAGCGGCAGTAg              <  1:117771/141‑1 (MQ=255)
                                                                                                                              cGCAAGATACTTCTACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACAAGTGCGCCTAGAATGAGAGCATTTAGTTTAGCGGCAGTAg              <  1:332742/141‑1 (MQ=255)
                                                                                                                              cGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACAAGTGCGCCTAGAATGAGAGCATTTAGTTTAGCGGCAGTAg              >  2:393149/1‑141 (MQ=255)
                                                                                                                                cAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACAAGTGCGCCTAGAATGAGAGCATTTAGTTTAGCGGCAGTAGCt            >  1:438702/1‑141 (MQ=255)
                                                                                                                                cAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACAAGTGCGCCTAGAATAAGAGCATTTAGTTTAGCGGCAGTAGcg            >  2:331740/1‑140 (MQ=255)
                                                                                                                                  aGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACAAGTGCGACTAGAATGAGAGCATTTAGTTTAGCGGCAGTAGCTGc          >  2:504771/1‑141 (MQ=255)
                                                                                                                                   gATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACAAGTGCGCCTAGAATGAGAGCATTTAGTTTAGCGGCAGTAGCTGCa         <  2:11096/141‑1 (MQ=255)
                                                                                                                                   gATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACAAGTGCGCCTAGAATGAGAGCATTTAGTTTAGCGGCAGTAGCTGCa         <  1:656266/141‑1 (MQ=255)
                                                                                                                                         tCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACAAGTGCGCCTAGAATGAGAGCATTTAGTTTAGCGGCAGTAGCTGCAGATGCa   >  1:592166/1‑141 (MQ=255)
                                                                                                                                         tCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACAAGTGCGCCTAGAATGAGAGCATTTAGTTTAGCGGCAGTAGCTGCAGATGCa   >  1:724857/1‑141 (MQ=255)
                                                                                                                                         tCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACAAGTGCGCCTAGAATGAGAGCATTTAGTTTAGCGGCAGTAGCTGCAGATGCa   >  1:32517/1‑141 (MQ=255)
                                                                                                                                          cAACTGAAGCAACACCATCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACAAGTGCGCCTAGAATGCGAGCATTTAGTTTAGCGGAAGTAGCTGCAGATGCAc  >  1:383499/1‑141 (MQ=255)
                                                                                                                                           |                                                                                                                                           
CAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTCTAATGATACTAATACAGTATCATCTGTAAATTCACCTCAAAATTCTACAAATGCGGAAAATGTTTCAACAACGCAAGATACTTCAACTGAAGCAACACCTTCAAACAATGAATCAGCTCCACAGAGTACAGATGCAAGTAATAAAGATGTAGTTAATCAAGCGGTTAATACAAGTGCGCCTAGAATGAGAGCATTTAGTTTAGCGGCAGTAGCTGCAGATGCAC  >  CP000730/873493‑873771

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: