| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 705321 = | 74 (1.070) | 4 (0.060) | 4/282 | 2.1 | 5.5% | intergenic (+1071/+89) | nhaK/psaA | possible CPA1 family monovalent cation (K+ or Na+):proton (H+) antiporter‑1/ABC superfamily ATP binding cassette transporter, binding protein |
| ? | CP000730 | 705378 = | 67 (1.030) | intergenic (+1128/+32) | nhaK/psaA | possible CPA1 family monovalent cation (K+ or Na+):proton (H+) antiporter‑1/ABC superfamily ATP binding cassette transporter, binding protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CACTAAAGGTGACTCTTACTACAAAATGATGAAATCAAATATTGAAACTGTACACGGAAGCATGAAATAACACGCTGTGTTTTAATGAAGTAAGATGAATTGATGTTGATGCAACCTAAAATATTGGTATCTCCAATATTTTAGGCCACACATCAACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/705479‑705321‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcaacatCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATATTTGATTTCATCATTTTGTAGTAAGAGTCACCTTTAGTGCCTTCTTTACCGATTGAATCTGTGTACACTTCACCAAAGATATC > CP000730/705378‑705523 CACTAAAGGTGACTCTTACTACAAAATGATGAAATCAAATATTGAAACTGTACACGGAAGCATGAAATAACACGCTGTGTTTTAATGAAGTAAGATGAATTGATGTTGATGCAACCTAAAATATTGGTATCTCCAATATTTTAGGCCACAC > 1:379471/1‑151 AGGTGACTCTTACTACAAAATGATGAAATCAAATATTGAAACTGTACACGGAAGCATGAAATAACACGCTGTGTTTTAATGAAGTAAGATGAATTGATGTTGATGCAACCTAAAATATTGGTATCTCCAATATTTTAGGCCACACATCAAC < 2:882122/151‑1 GAATTGATGTTGATGCAACCTAAAATATTGGTATCTCCAATATTTTAGGCCACACATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATATT > 1:1041485/1‑128 GAATTGATGTTGATGCAACCTAAAATATTGGTATCTCCAATATTTTAGGCCACACATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATATT < 2:1041485/128‑1 GGTATCTCCAATATTTTAGGCCACACATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATATTTGATTTCATCATTTTGTAGTAAGAGTCACCTTTAGTGCCTTCTTTACCGATT > 1:499424/1‑151 GTATCTCCAATATTTTAGGCCACACATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATATTTGATTTCATCATTTTGTAGTAAGAGTCACCTTTAGTGCCTTCTTTACCGATTG > 1:108008/1‑151 ATCAACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATATTTGATTTCATCATTTTGTAGTAAGAGTCACCTTTAGTGCCTTCTTTACCGATTGAATCTGTGTACACTTCACCAAAGAT > 2:339104/1‑151 AACATCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATATTTGATTTCATCATTTTGTAGTAAGAGTCACCTTTAGTGCCTTCTTTACCGATTGAATCTGTGTACACTTCACCAAAGATATC < 2:375825/151‑1 CACTAAAGGTGACTCTTACTACAAAATGATGAAATCAAATATTGAAACTGTACACGGAAGCATGAAATAACACGCTGTGTTTTAATGAAGTAAGATGAATTGATGTTGATGCAACCTAAAATATTGGTATCTCCAATATTTTAGGCCACACATCAACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/705479‑705321‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcaacatCAATTCATCTTACTTCATTAAAACACAGCGTGTTATTTCATGCTTCCGTGTACAGTTTCAATATTTGATTTCATCATTTTGTAGTAAGAGTCACCTTTAGTGCCTTCTTTACCGATTGAATCTGTGTACACTTCACCAAAGATATC > CP000730/705378‑705523 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |