| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP000730 | 1562066 | 1562379 | 314 | 2 [1] | [1] 2 | lukS‑PV/USA300HOU_1432 | Panton‑Valentine leukocidin subunit S/bacteriophage amidase |
CTCAGCGCCATCACCAATATTCTCAATATTGTTATCAGCTTTAGATTCATGAAACGAAGTAGCAATAGGAGTGATTATTCCTAACGACAATGTTGCAGCTAATAGTCTTTTTTTGACCATAAAAATCATTTCCTTTCTTTATAAATTTTATTACATTTTTATATTAAACCTTTTTAACTTTTAATAAAATTAAATATTTATTAAAAGATTTACCGAGTTTAAAATATCTACAAATGTGTTTTTTTACTATTATTTCGAAAAAAACCCGTTCATTACCAAACAAATT > CP000730/1561915‑1562200 | cTCAGCGCCATCACCAATATTCTCAATATTGTTATCAGCTTTAGATTCATGAAACGAAGTAGCAATAGGAGTGATTATTCCTAACGACAATGTTGCAGCTAATAGTCTTTTTTTGACCATAAAAATCATTTCCTTTCTTTATAAATTttat > 2:240222/1‑151 (MQ=255) tctttATAAATTTTATTACATTTTTATATTAAACCTTTTTAACTTTTAATAAAATTAAATATTTATTAAAAGATTTACCGAGTTTAAAATATCTACAAATGTGTTTTTTTACTATTATTTCGAAAAAAACCCGTTCATTACCAAACAAAtt < 1:240222/151‑1 (MQ=255) | CTCAGCGCCATCACCAATATTCTCAATATTGTTATCAGCTTTAGATTCATGAAACGAAGTAGCAATAGGAGTGATTATTCCTAACGACAATGTTGCAGCTAATAGTCTTTTTTTGACCATAAAAATCATTTCCTTTCTTTATAAATTTTATTACATTTTTATATTAAACCTTTTTAACTTTTAATAAAATTAAATATTTATTAAAAGATTTACCGAGTTTAAAATATCTACAAATGTGTTTTTTTACTATTATTTCGAAAAAAACCCGTTCATTACCAAACAAATT > CP000730/1561915‑1562200 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |