Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000730	2411329	2411560	232	2 [0]	[1] 2	sarR/USA300HOU_2277	staphylococcal accessory regulator A/hypothetical protein

ATTTATTAAATCGAAACTCTATCCAACTATGTTATAAAGTTCATTCTAAACAAATAAGTATAAAAATTCAATATTTTTAT  >  CP000730/2411249‑2411328                                                                                | aTTTATTAAATCGAAACTCTATCCAACTATGTTATAAAGTTCATTCTAAACAAATAAGTATAAAAATTCAATATTTttat  <  1:166210/80‑1 (MQ=255) aTTTATTAAATCGAAACTCTATCCAACTATGTTATAAAGTTCATTCTAAACAAATAAGTATAAAAATTCAATATTTttat  >  2:166210/1‑80 (MQ=255)                                                                                | ATTTATTAAATCGAAACTCTATCCAACTATGTTATAAAGTTCATTCTAAACAAATAAGTATAAAAATTCAATATTTTTAT  >  CP000730/2411249‑2411328

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑