Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000730	654664	654795	132	2 [1]	[1] 2	USA300HOU_0592	hypothetical protein

TTGGGAATGCTGTTAGTGAAGCTAAAAATATTATTAGCAATCATATAAATCCAATGAAATGGGCGTGGTGAGTTTTGCTTTTTAATATTAAGGTTATTAATAAAAATCCGAGATATAAAGTCGTTCAATATAATGATGAGTATTTGTTAATTGATTT  >  CP000730/654513‑654669                                                                                                                                                       |       ttGGGAATGCTGTTAGTGAAGATAAAAATATTATTAGCAATTATATAAATCAGATGAAATGGGCGTGGTGAGTTTTGCTTTTTAATATTAAAGTTATTAATCAAAATCCGAGATATAAAGTCGTTCAATATAATGATGAGTATTTGTTAAt        <  2:182131/151‑1 (MQ=255)       aTGCTGTTAGTGAAGCTAAAAATATTATTAGCAATCATATAAATCCAATGAAATGGGCGTGGTGAGTTTTGCTTTTTAATATTAAGGTTATTAATAAAAATCCGAGATATAAAGTCGTTCAATATAATGATGAGTATTTGTTAATTGAttt  <  2:361623/151‑1 (MQ=255)                                                                                                                                                       |       TTGGGAATGCTGTTAGTGAAGCTAAAAATATTATTAGCAATCATATAAATCCAATGAAATGGGCGTGGTGAGTTTTGCTTTTTAATATTAAGGTTATTAATAAAAATCCGAGATATAAAGTCGTTCAATATAATGATGAGTATTTGTTAATTGATTT  >  CP000730/654513‑654669

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑