Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000730	1171489	1171798	310	2 [1]	[0] 2	hly/USA300HOU_1100	alpha‑hemolysin/hypothetical protein

TATTTTTAATATAGTGTAAAATATTATATGTAAAATAAAATGTAGGTTTTTAGTTAGAGGCATTATAAGAAAATTTTGAGTATAGGTTAGCTTTTAATT  >  CP000730/1171799‑1171897 |                                                                                                   tatTTTTAATATAGTGTAAAATATTATATGTAAAATAAAATGTAGGTTTTTAGTTAGAGGCATTATAAGAAAATTTTGAGTATAGGTTAGCTTTTAAtt  <  1:394934/99‑1 (MQ=255) tatTTTTAATATAGTGTAAAATATTATATGTAAAATAAAATGTAGGTTTTTAGTTAGAGGCATTATAAGAAAATTTTGAGTATAGGTTAGCTTTTAAtt  >  2:394934/1‑99 (MQ=255) |                                                                                                   TATTTTTAATATAGTGTAAAATATTATATGTAAAATAAAATGTAGGTTTTTAGTTAGAGGCATTATAAGAAAATTTTGAGTATAGGTTAGCTTTTAATT  >  CP000730/1171799‑1171897

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑